BQ623392

Overview
NameBQ623392
Unique NameBQ623392
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length613
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623392 vs. ExPASy Swiss-Prot
Match: CYSP_TRYBB (Cysteine proteinase OS=Trypanosoma brucei brucei PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.714e-19
Identity = 51/121 (42.15%), Postives = 71/121 (58.68%), Query Frame = 3
Query:   18 CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 374
            C+ +  +I AA+++   +  DED +AA L ++GPLA+ ++A     Y GG+  SC     K LDHGVL+VGY  +          PYWIIKNSW   WGE+GY +I  G N C ++  VSS
Sbjct:  226 CQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPLAIAVDAESFMDYNGGILTSCT---SKQLDHGVLLVGYNDNS-------NPPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSS 336          
BLAST of BQ623392 vs. ExPASy Swiss-Prot
Match: LMCPB_LEIME (Cysteine proteinase B OS=Leishmania mexicana GN=LMCPB PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 6.515e-19
Identity = 47/104 (45.19%), Postives = 63/104 (60.58%), Query Frame = 3
Query:   39 IAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVC 350
            + A +    +I S E  MAA L K+GP+A+ ++A    +Y  GV    I GK L+HGVL+VGY  +G       E PYW+IKNSWG +WGE GY ++ MG N C
Sbjct:  234 VGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDASSFMSYKSGVLTACI-GKQLNHGVLLVGYDMTG-------EVPYWVIKNSWGGDWGEQGYVRVVMGVNAC 329          
BLAST of BQ623392 vs. ExPASy Swiss-Prot
Match: CYSP2_LEIPI (Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS2 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 6.515e-19
Identity = 47/104 (45.19%), Postives = 63/104 (60.58%), Query Frame = 3
Query:   39 IAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVC 350
            + A +    +I S E  MAA L K+GP+A+ ++A    +Y  GV    I GK L+HGVL+VGY  +G       E PYW+IKNSWG +WGE GY ++ MG N C
Sbjct:  235 VGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDASSFMSYKSGVLTACI-GKQLNHGVLLVGYDMTG-------EVPYWVIKNSWGGDWGEQGYVRVVMGVNAC 330          
BLAST of BQ623392 vs. ExPASy Swiss-Prot
Match: LMCPA_LEIME (Cysteine proteinase A OS=Leishmania mexicana GN=LMCPA PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.895e-18
Identity = 46/119 (38.66%), Postives = 69/119 (57.98%), Query Frame = 3
Query:    3 TDGGSCK---FDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVC 350
            T GG  +    D+ ++ A ++ F  +  DE+++A  + K GP+AV ++A   Q Y GGV    +    L+HGVLIVG+  +        + PYWI+KNSWG +WGE GY ++ MG N C
Sbjct:  220 TSGGGTRPPCHDEGEVGAKITGFLSLPHDEERIAEWVEKRGPVAVAVDATTWQLYFGGVVSLCLAWS-LNHGVLIVGFNKNA-------KPPYWIVKNSWGSSWGEKGYIRLAMGSNQC 330          
BLAST of BQ623392 vs. ExPASy Swiss-Prot
Match: CYSP1_LEIPI (Cysteine proteinase 1 OS=Leishmania pifanoi GN=CYS1 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 1.895e-18
Identity = 46/119 (38.66%), Postives = 69/119 (57.98%), Query Frame = 3
Query:    3 TDGGSCK---FDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVC 350
            T GG  +    D+ ++ A ++ F  +  DE+++A  + K GP+AV ++A   Q Y GGV    +    L+HGVLIVG+  +        + PYWI+KNSWG +WGE GY ++ MG N C
Sbjct:  220 TSGGGTRPPCHDEGEVGAKITGFLSLPHDEERIAEWVEKRGPVAVAVDATTWQLYFGGVVSLCLAWS-LNHGVLIVGFNKNA-------KPPYWIVKNSWGSSWGEKGYIRLAMGSNQC 330          
BLAST of BQ623392 vs. ExPASy Swiss-Prot
Match: CATV_NPVAH (Viral cathepsin OS=Adoxophyes honmai nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.476e-18
Identity = 47/128 (36.72%), Postives = 74/128 (57.81%), Query Frame = 3
Query:   12 GSCKFDKSKIAAAVSNFS-VISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIH 389
            G CK D  K A +VS+    I  +E+ +   L+  GP+A+ I+A  + TY  G+   + C    L+H VL+VGYG+ G          YW +KNSWG +WGE+GY+++    N CG+++ +++ A IH
Sbjct:  219 GVCKIDNKKFALSVSSCKRYIFQNEENLKKELITMGPIAMAIDAASISTYSKGII--HFCENLGLNHAVLLVGYGTEGGVS-------YWTLKNSWGSDWGEDGYFRVKRNINACGLNNQLAASATIH 337          
BLAST of BQ623392 vs. ExPASy Swiss-Prot
Match: CATW_MOUSE (Cathepsin W OS=Mus musculus GN=Ctsw PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 7.203e-18
Identity = 48/126 (38.10%), Postives = 69/126 (54.76%), Query Frame = 3
Query:   18 CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV--SCPYICG-KYLDHGVLIVGYGSS----------GFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 356
            C   K K  A + +F+++S++E  +A  L  HGP+ V IN   +Q Y  GV  + P  C  + +DH VL+VG+G              +  R    PYWI+KNSWG +WGE GY+++  G N CGV
Sbjct:  224 CLAKKYKKVAWIQDFTMLSNNEQAIAHYLAVHGPITVTINMKLLQHYQKGVIKATPSSCDPRQVDHSVLLVGFGKKKEGMQTGTVLSHSRKRRHSSPYWILKNSWGAHWGEKGYFRLYRGNNTCGV 349          
BLAST of BQ623392 vs. ExPASy Swiss-Prot
Match: CATO_MOUSE (Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 7.203e-18
Identity = 46/125 (36.80%), Postives = 71/125 (56.80%), Query Frame = 3
Query:   12 GSCK-FDKSKIAAAVSNFSVIS--SDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSV 377
            G C+ F +S+   +V +FS  +    ED+MA  L+  GPL V ++A+  Q Y+GG+   +      +H VLI G+  +G         PYW+++NSWG +WG  GY  + MG NVCG+   V++V
Sbjct:  193 GQCRHFPQSQAGVSVKDFSAYNFRGQEDEMARALLSFGPLVVIVDAMSWQDYLGGIIQHHCSSGEANHAVLITGFDRTG-------NTPYWMVRNSWGSSWGVEGYAHVKMGGNVCGIADSVAAV 310          
BLAST of BQ623392 vs. ExPASy Swiss-Prot
Match: CATO_HUMAN (Cathepsin O OS=Homo sapiens GN=CTSO PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 7.203e-18
Identity = 46/120 (38.33%), Postives = 66/120 (55.00%), Query Frame = 3
Query:   24 FDKSKIAAAVSNFSV--ISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSV 377
            F  S    ++  +S    S  ED+MA  L+  GPL V ++AV  Q Y+GG+   +      +H VLI G+  +G         PYWI++NSWG +WG +GY  + MG NVCG+   VSS+
Sbjct:  207 FSGSHSGFSIKGYSAYDFSDQEDEMAKALLTFGPLVVIVDAVSWQDYLGGIIQHHCSSGEANHAVLITGFDKTG-------STPYWIVRNSWGSSWGVDGYAHVKMGSNVCGIADSVSSI 319          
BLAST of BQ623392 vs. ExPASy Swiss-Prot
Match: CYSP_TRYCR (Cruzipain OS=Trypanosoma cruzi PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.229e-17
Identity = 49/119 (41.18%), Postives = 62/119 (52.10%), Query Frame = 3
Query:   18 CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 374
            C      + A ++    +  DE Q+AA L  +GP+AV ++A    TY GGV    +  + LDHGVL+VGY  S   P       YWIIKNSW   WGE GY +I  G N C V    SS
Sbjct:  223 CTTSGHTVGATITGHVELPQDEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTSCV-SEQLDHGVLLVGYNDSAAVP-------YWIIKNSWTTQWGEEGYIRIAKGSNQCLVKEEASS 333          
The following BLAST results are available for this feature:
BLAST of BQ623392 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 103
Match NameE-valueIdentityDescription
CYSP_TRYBB1.714e-1942.15Cysteine proteinase OS=Trypanosoma brucei brucei P... [more]
LMCPB_LEIME6.515e-1945.19Cysteine proteinase B OS=Leishmania mexicana GN=LM... [more]
CYSP2_LEIPI6.515e-1945.19Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS... [more]
LMCPA_LEIME1.895e-1838.66Cysteine proteinase A OS=Leishmania mexicana GN=LM... [more]
CYSP1_LEIPI1.895e-1838.66Cysteine proteinase 1 OS=Leishmania pifanoi GN=CYS... [more]
CATV_NPVAH2.476e-1836.72Viral cathepsin OS=Adoxophyes honmai nucleopolyhed... [more]
CATW_MOUSE7.203e-1838.10Cathepsin W OS=Mus musculus GN=Ctsw PE=2 SV=1[more]
CATO_MOUSE7.203e-1836.80Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1[more]
CATO_HUMAN7.203e-1838.33Cathepsin O OS=Homo sapiens GN=CTSO PE=1 SV=1[more]
CYSP_TRYCR1.229e-1741.18Cruzipain OS=Trypanosoma cruzi PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00483 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00483 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623392 ID=BQ623392; Name=BQ623392; organism=Citrus sinensis; type=EST; length=613bp
GGACCGACGGTGGTTCCTGCAAATTTGACAAAAGCAAAATTGCTGCAGCT
GTATCTAATTTCAGTGTTATTTCCTCTGATGAAGATCAAATGGCTGCAAA
TTTGGTGAAACATGGCCCTCTGGCAGTGGGTATCAATGCCGTTTGGATGC
AAACATATATTGGAGGAGTTTCATGCCCATACATTTGCGGGAAGTATTTG
GATCATGGAGTGCTTATCGTGGGCTATGGATCCTCAGGTTTCGCCCCGAT
CAGATTCAAGGAGAAGCCTTACTGGATCATAAAGAACTCCTGGGGAGAGA
ACTGGGGAGAGAATGGATATTATAAGATCTGCATGGGTCGCAATGTCTGT
GGGGTCGACTCCATGGTCTCATCTGTAGCTGCTATCCATACAACCTCAAG
CTAGACATTATGGAGGTTGTGCTAGGCAAGTGGAGCTTCTGTACCTAGAT
ATTATAGGATATCCTTTTAAATATCCGTCTGCAATTATAACGATGCCTAC
ATGCCTGGGCTGAGGCATGAACTTTCTATGCTCTTGTAATATTTAAGCAT
ATGTCATGTCAGAATGTAATATTTATCTATTTTATAGTTAAAAAAAAAAA
AAAAAAAAAAAAC
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