BQ623392

Overview
NameBQ623392
Unique NameBQ623392
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length613
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623392 vs. ExPASy Swiss-Prot
Match: CATL1_CERAE (Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.462e-12
Identity = 44/123 (35.77%), Postives = 59/123 (47.97%), Query Frame = 3
Query:   15 SCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG-RNVCGVDSMVS 371
            SCK++     A  + F  I   E  +   +   GP++V I+A       Y  G+     C    +DHGVL+VGYG   F         YW++KNSWGE WG  GY K+    RN CG+ S  S
Sbjct:  210 SCKYNPEYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFMFYKEGIYFEPDCSSEDMDHGVLVVGYG---FESTESDNSKYWLVKNSWGEEWGMGGYIKMAKDRRNHCGIASAAS 329          
BLAST of BQ623392 vs. ExPASy Swiss-Prot
Match: XCP1_ARATH (Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.522e-12
Identity = 48/129 (37.21%), Postives = 64/129 (49.61%), Query Frame = 3
Query:   12 GSCKFDKSKIA-AAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRN------VCGVDSMVS 371
            G C+  K  +    +S +  +  ++D+     + H P++V I A     Q Y GGV     CG  LDHGV  VGYGSS       K   Y I+KNSWG  WGE G+  I M RN      +CG++ M S
Sbjct:  231 GICQEQKEDVERVTISGYEDVPENDDESLVKALAHQPVSVAIEASGRDFQFYKGGVFNGK-CGTDLDHGVAAVGYGSS-------KGSDYVIVKNSWGPRWGEKGF--IRMKRNTGKPEGLCGINKMAS 349          
BLAST of BQ623392 vs. ExPASy Swiss-Prot
Match: CATV_GVXN (Viral cathepsin OS=Xestia c-nigrum granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.522e-12
Identity = 36/106 (33.96%), Postives = 59/106 (55.66%), Query Frame = 3
Query:   81 EDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTTS 398
            E ++   L + GP++V I+ V +  Y  GV+        L+HGVL+VGYG          +  YW +KNSWG +WGE G+++I    N CG+ +  ++ A + ++S
Sbjct:  248 EKKLRQVLHEKGPVSVAIDVVDLTNYKSGVAKHCSVDHGLNHGVLLVGYGQEN-------DVKYWTLKNSWGSDWGEQGFFRIKRDVNSCGILNQFAASAILSSSS 346          
BLAST of BQ623392 vs. ExPASy Swiss-Prot
Match: CATLL_FASHE (Cathepsin L-like proteinase OS=Fasciola hepatica GN=Cat-1 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.522e-12
Identity = 42/125 (33.60%), Postives = 64/125 (51.20%), Query Frame = 3
Query:   12 GSCKFDKSKIAAAVSNFSVISSDEDQMAANLV---KHGPLAVGINAVWMQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 371
            G C+++K    A V+ +  + S  +    NLV   +   +AV + + +M  Y  G+     C    ++H VL VGYG+ G          YWI+KNSWG  WGE GY ++   R N+CG+ S+ S
Sbjct:  202 GQCRYNKQLGVAKVTGYYTVHSGSEVELKNLVGARRPAAVAVDVESDFMM-YRSGIYQSQTCSPLRVNHAVLAVGYGTQGGTD-------YWIVKNSWGTYWGERGYIRMARNRGNMCGIASLAS 318          
BLAST of BQ623392 vs. ExPASy Swiss-Prot
Match: CATH_HUMAN (Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4)

HSP 1 Score: 71.2478 bits (173), Expect = 4.522e-12
Identity = 43/125 (34.40%), Postives = 58/125 (46.40%), Query Frame = 3
Query:   12 GSCKFDKSKIAAAVSNFSVISS-DEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYICGKYLD---HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 371
            G CKF   K    V + + I+  DE+ M   +  + P++           Y  G+     C K  D   H VL VGYG     P       YWI+KNSWG  WG NGY+ I  G+N+CG+ +  S
Sbjct:  212 GYCKFQPGKAIGFVKDVANITIYDEEAMVEAVALYNPVSFAFEVTQDFMMYRTGIYSSTSCHKTPDKVNHAVLAVGYGEKNGIP-------YWIVKNSWGPQWGMNGYFLIERGKNMCGLAACAS 329          
BLAST of BQ623392 vs. ExPASy Swiss-Prot
Match: CATC_MACFA (Dipeptidyl-peptidase 1 OS=Macaca fascicularis GN=CTSC PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.522e-12
Identity = 39/113 (34.51%), Postives = 60/113 (53.10%), Query Frame = 3
Query:   78 DEDQMAANLVKHGPLAVGI----------NAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAI 386
            +E  M   LV HGPLAV            N ++  T   G+  P+   +  +H VL+VGYG+   + +      YWI+KNSWG +WGE+GY++I  G + C ++S+  +   I
Sbjct:  356 NEALMKLELVYHGPLAVAFEVYDDFLHYQNGIYHHT---GLRDPFNPFELTNHAVLLVGYGTDSASGM-----DYWIVKNSWGTSWGEDGYFRIRRGTDECAIESIAVAATPI 460          
BLAST of BQ623392 vs. ExPASy Swiss-Prot
Match: XCP2_ARATH (Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 5.906e-12
Identity = 44/127 (34.65%), Postives = 64/127 (50.39%), Query Frame = 3
Query:   12 GSCKFDKSKI-AAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG----RNVCGVDSMVS 371
            G+C+  K +     ++    + +++++     + H PL+V I+A     Q Y GGV     CG  LDHGV  VGYGSS       K   Y I+KNSWG  WGE GY ++         +CG++ M S
Sbjct:  232 GTCEMQKDESETVTINGHQDVPTNDEKSLLKALAHQPLSVAIDASGREFQFYSGGVFDGR-CGVDLDHGVAAVGYGSS-------KGSDYIIVKNSWGPKWGEKGYIRLKRNTGKPEGLCGINKMAS 350          
BLAST of BQ623392 vs. ExPASy Swiss-Prot
Match: CATV_NPVAP (Viral cathepsin OS=Antheraea pernyi nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.906e-12
Identity = 40/129 (31.01%), Postives = 67/129 (51.94%), Query Frame = 3
Query:    6 DGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIH 389
            + G C+ + +K    V   +  ++  E+++   L   GP+ V I+A  +  Y  G+   Y     L+H VL+VGYG     P       +WI+KN+WG +WGE GY+++    N CG+ + + S A I+
Sbjct:  204 NNGPCRVNAAKFVVRVKKCYRYVTLFEEKLKDLLRIVGPIPVAIDASDIVGYKRGI-IRYCENHGLNHAVLLVGYGVENGIP-------FWILKNTWGADWGEQGYFRVQQNINACGIKNELPSSAEIY 324          
BLAST of BQ623392 vs. ExPASy Swiss-Prot
Match: CATL1_HUMAN (Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 5.906e-12
Identity = 44/123 (35.77%), Postives = 59/123 (47.97%), Query Frame = 3
Query:   15 SCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQT--YIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG-RNVCGVDSMVS 371
            SCK++     A  + F  I   E  +   +   GP++V I+A       Y  G+     C    +DHGVL+VGYG   F         YW++KNSWGE WG  GY K+    RN CG+ S  S
Sbjct:  210 SCKYNPKYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYG---FESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAAS 329          
BLAST of BQ623392 vs. ExPASy Swiss-Prot
Match: CATH_PIG (Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.906e-12
Identity = 43/123 (34.96%), Postives = 59/123 (47.97%), Query Frame = 3
Query:   18 CKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYICGKYLD---HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 371
            CKF   K  A V + + I+ +DE+ M   +  + P++           Y  G+     C K  D   H VL VGYG     P       YWI+KNSWG  WG NGY+ I  G+N+CG+ +  S
Sbjct:  214 CKFQPDKAIAFVKDVANITMNDEEAMVEAVALYNPVSFAFEVTNDFLMYRKGIYSSTSCHKTPDKVNHAVLAVGYGEENGIP-------YWIVKNSWGPQWGMNGYFLIERGKNMCGLAACAS 329          
The following BLAST results are available for this feature:
BLAST of BQ623392 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 103
Match NameE-valueIdentityDescription
CATL1_CERAE3.462e-1235.77Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE... [more]
XCP1_ARATH4.522e-1237.21Xylem cysteine proteinase 1 OS=Arabidopsis thalian... [more]
CATV_GVXN4.522e-1233.96Viral cathepsin OS=Xestia c-nigrum granulosis viru... [more]
CATLL_FASHE4.522e-1233.60Cathepsin L-like proteinase OS=Fasciola hepatica G... [more]
CATH_HUMAN4.522e-1234.40Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4[more]
CATC_MACFA4.522e-1234.51Dipeptidyl-peptidase 1 OS=Macaca fascicularis GN=C... [more]
XCP2_ARATH5.906e-1234.65Xylem cysteine proteinase 2 OS=Arabidopsis thalian... [more]
CATV_NPVAP5.906e-1231.01Viral cathepsin OS=Antheraea pernyi nuclear polyhe... [more]
CATL1_HUMAN5.906e-1235.77Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2[more]
CATH_PIG5.906e-1234.96Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00483 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00483 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623392 ID=BQ623392; Name=BQ623392; organism=Citrus sinensis; type=EST; length=613bp
GGACCGACGGTGGTTCCTGCAAATTTGACAAAAGCAAAATTGCTGCAGCT
GTATCTAATTTCAGTGTTATTTCCTCTGATGAAGATCAAATGGCTGCAAA
TTTGGTGAAACATGGCCCTCTGGCAGTGGGTATCAATGCCGTTTGGATGC
AAACATATATTGGAGGAGTTTCATGCCCATACATTTGCGGGAAGTATTTG
GATCATGGAGTGCTTATCGTGGGCTATGGATCCTCAGGTTTCGCCCCGAT
CAGATTCAAGGAGAAGCCTTACTGGATCATAAAGAACTCCTGGGGAGAGA
ACTGGGGAGAGAATGGATATTATAAGATCTGCATGGGTCGCAATGTCTGT
GGGGTCGACTCCATGGTCTCATCTGTAGCTGCTATCCATACAACCTCAAG
CTAGACATTATGGAGGTTGTGCTAGGCAAGTGGAGCTTCTGTACCTAGAT
ATTATAGGATATCCTTTTAAATATCCGTCTGCAATTATAACGATGCCTAC
ATGCCTGGGCTGAGGCATGAACTTTCTATGCTCTTGTAATATTTAAGCAT
ATGTCATGTCAGAATGTAATATTTATCTATTTTATAGTTAAAAAAAAAAA
AAAAAAAAAAAAC
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