BQ623397

Overview
NameBQ623397
Unique NameBQ623397
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length492
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623397 vs. ExPASy Swiss-Prot
Match: AQP1_PIG (Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3)

HSP 1 Score: 83.1889 bits (204), Expect = 7.087e-16
Identity = 39/67 (58.21%), Postives = 47/67 (70.15%), Query Frame = 1
Query:   61 APLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVI 261
            APL IGF+V L HL  I  TG GINPARS G+A+I    H + DHW+FWVGPFIG ALA L +  ++
Sbjct:  170 APLAIGFSVALGHLLAIDYTGCGINPARSFGSAVI---THNFQDHWVFWVGPFIGGALAVLIYDFIL 233          
BLAST of BQ623397 vs. ExPASy Swiss-Prot
Match: AQP1_SHEEP (Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3)

HSP 1 Score: 82.4185 bits (202), Expect = 1.209e-15
Identity = 39/66 (59.09%), Postives = 47/66 (71.21%), Query Frame = 1
Query:   64 PLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVI 261
            PL IGF+V L HL  I  TG GINPARS G+++I    H + DHWIFWVGPFIGAALA L +  ++
Sbjct:  172 PLAIGFSVALGHLLAIDYTGCGINPARSFGSSVI---THNFQDHWIFWVGPFIGAALAVLIYDFIL 234          
BLAST of BQ623397 vs. ExPASy Swiss-Prot
Match: AQP1_BOVIN (Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3)

HSP 1 Score: 82.4185 bits (202), Expect = 1.209e-15
Identity = 39/66 (59.09%), Postives = 47/66 (71.21%), Query Frame = 1
Query:   64 PLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVI 261
            PL IGF+V L HL  I  TG GINPARS G+++I    H + DHWIFWVGPFIGAALA L +  ++
Sbjct:  171 PLAIGFSVALGHLLAIDYTGCGINPARSFGSSVI---THNFQDHWIFWVGPFIGAALAVLIYDFIL 233          
BLAST of BQ623397 vs. ExPASy Swiss-Prot
Match: AQP1_PONAB (Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3)

HSP 1 Score: 79.337 bits (194), Expect = 1.023e-14
Identity = 38/67 (56.72%), Postives = 46/67 (68.66%), Query Frame = 1
Query:   61 APLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVI 261
            APL IG +V L HL  I  TG GINPARS G+A+I    H + +HWIFWVGPFIG ALA L +  ++
Sbjct:  168 APLAIGLSVALGHLLAIDYTGCGINPARSFGSAVI---THNFSNHWIFWVGPFIGGALAVLIYDFIL 231          
BLAST of BQ623397 vs. ExPASy Swiss-Prot
Match: AQP1_HUMAN (Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3)

HSP 1 Score: 79.337 bits (194), Expect = 1.023e-14
Identity = 38/67 (56.72%), Postives = 46/67 (68.66%), Query Frame = 1
Query:   61 APLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVI 261
            APL IG +V L HL  I  TG GINPARS G+A+I    H + +HWIFWVGPFIG ALA L +  ++
Sbjct:  168 APLAIGLSVALGHLLAIDYTGCGINPARSFGSAVI---THNFSNHWIFWVGPFIGGALAVLIYDFIL 231          
BLAST of BQ623397 vs. ExPASy Swiss-Prot
Match: AQP1_CANFA (Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3)

HSP 1 Score: 78.1814 bits (191), Expect = 2.280e-14
Identity = 37/66 (56.06%), Postives = 45/66 (68.18%), Query Frame = 1
Query:   64 PLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVI 261
            PL IG +V L HL  I  TG GINPARS G+++I    H + DHWIFWVGPFIG ALA L +  ++
Sbjct:  171 PLAIGLSVALGHLLAIDYTGCGINPARSFGSSVI---THNFKDHWIFWVGPFIGGALAVLIYDFIL 233          
BLAST of BQ623397 vs. ExPASy Swiss-Prot
Match: AQP1_RAT (Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4)

HSP 1 Score: 75.8702 bits (185), Expect = 1.131e-13
Identity = 36/67 (53.73%), Postives = 46/67 (68.66%), Query Frame = 1
Query:   61 APLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVI 261
            APL IG +V L HL  I  TG GINPARS G+A++      + +HWIFWVGPFIG+ALA L +  ++
Sbjct:  168 APLAIGLSVALGHLLAIDYTGCGINPARSFGSAVL---TRNFSNHWIFWVGPFIGSALAVLIYDFIL 231          
BLAST of BQ623397 vs. ExPASy Swiss-Prot
Match: AQP1_MOUSE (Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 1.478e-13
Identity = 36/67 (53.73%), Postives = 45/67 (67.16%), Query Frame = 1
Query:   61 APLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVI 261
            APL IG +V L HL  I  TG GINPARS G+A++      + +HWIFWVGPFIG ALA L +  ++
Sbjct:  168 APLAIGLSVALGHLLAIDYTGCGINPARSFGSAVL---TRNFSNHWIFWVGPFIGGALAVLIYDFIL 231          
BLAST of BQ623397 vs. ExPASy Swiss-Prot
Match: MIP_CHICK (Lens fiber major intrinsic protein OS=Gallus gallus GN=MIP PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 4.299e-13
Identity = 34/70 (48.57%), Postives = 47/70 (67.14%), Query Frame = 1
Query:   52 PILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVI 261
            P  A LP+GF++ L HL  IP TG G+NPARS   A+I      + +HW+FW GP +GAALAAL +++ +
Sbjct:  157 PGSAALPVGFSLALGHLFGIPFTGAGMNPARSFAPAVI---TRNFTNHWVFWAGPLLGAALAALLYELAL 223          
BLAST of BQ623397 vs. ExPASy Swiss-Prot
Match: AQP_HAEIX (Aquaporin OS=Haematobia irritans exigua PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 4.299e-13
Identity = 31/68 (45.59%), Postives = 45/68 (66.18%), Query Frame = 1
Query:   61 APLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIGAALAALYHQVVIR 264
            APL +G ++   HL  I +TG  +NPARS G A++ N    W DHW++WVGP +GA +AAL ++ V +
Sbjct:  174 APLAVGLSIAAGHLCAIKLTGASMNPARSFGPAVVQNM---WIDHWVYWVGPIVGAIVAALLYKFVFK 238          
The following BLAST results are available for this feature:
BLAST of BQ623397 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 75
Match NameE-valueIdentityDescription
AQP1_PIG7.087e-1658.21Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3[more]
AQP1_SHEEP1.209e-1559.09Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3[more]
AQP1_BOVIN1.209e-1559.09Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3[more]
AQP1_PONAB1.023e-1456.72Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3[more]
AQP1_HUMAN1.023e-1456.72Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3[more]
AQP1_CANFA2.280e-1456.06Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3[more]
AQP1_RAT1.131e-1353.73Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4[more]
AQP1_MOUSE1.478e-1353.73Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3[more]
MIP_CHICK4.299e-1348.57Lens fiber major intrinsic protein OS=Gallus gallu... [more]
AQP_HAEIX4.299e-1345.59Aquaporin OS=Haematobia irritans exigua PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00488 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00488 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623397 ID=BQ623397; Name=BQ623397; organism=Citrus sinensis; type=EST; length=492bp
GGGTTTTCTCTGCCACTGACGCCAAACGTAGCCGCCAGAGACTCTCATGT
TCCTATTTTGGCTCCTTTGCCAATTGGGTTCGCTGTGTTCTTGGTTCACT
TGGCTACTATCCCTATTACCGGAACTGGCATCAACCCCGCAAGGAGTCTT
GGAGCTGCAATCATCTACAACAAGGACCACGGTTGGGATGACCATTGGAT
TTTCTGGGTGGGACCATTCATTGGAGCAGCACTTGCAGCTTTGTACCACC
AGGTTGTGATCAGAGCCATTCCGTTCAAATCAAGCTGATGGTCTTATGAA
CGGTCGTGATTGCTGATGCATTTGTTTATGGCTGTCGTTGGTGGTTCTGT
TTTATATTTTAGATTATCCCAAGTCCATGCATTTTCGGTTCGTTAAATTT
TCTGGTTGTTTGGTTTTGTGTATGAATTTTCTGTAATGCCTATGCACAAA
GAAGCCGCTGGCAGTGGCTTTATTTAAATTTATGTAGTTTAT
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