BQ623411

Overview
NameBQ623411
Unique NameBQ623411
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length590
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2115 contig Csv1_Contig2115:110..699. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623411 vs. ExPASy Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 4.901e-37
Identity = 82/194 (42.27%), Postives = 115/194 (59.28%), Query Frame = 1
Query:    7 RVRIALAEKGVKYEYKEQDLFNKSPLLLRMNPVHKKIPVLIHNGKSVCESSIIVQYIDEVWKDKAPLLPYDPYQRAQARFWVDFIDKKMYD-TSRKTWATKGEEQEAAKKEFIEVLKTLEGELGDKPFFGGDNFGYVDLCLIPYYCWFYSYETFG--KFSVEAECPKFIAWVKRCLQRETVAKALPDEKKVFEF 579
            RV+IAL  KGV+Y++ E++L NKS LLL+ NPVHKK+PV +HN + + ES +IV+YIDE WK+  P+LP DPYQRA ARFW  FID K+    S+  +    +E+E   +E  E L+ LE EL DK FFGG+ FG VD+  +    W   ++     +     + P    W +  L    V + LP    +F +
Sbjct:   21 RVQIALKLKGVEYKFLEENLGNKSDLLLKYNPVHKKVPVFVHNEQPIAESLVIVEYIDETWKNN-PILPSDPYQRALARFWSKFIDDKIVGAVSKSVFTVDEKEREKNVEETYEALQFLENELKDKKFFGGEEFGLVDIAAVFIAFWIPIFQEIAGLQLFTSEKFPILYKWSQEFLNHPFVHEVLPPRDPLFAY 213          
BLAST of BQ623411 vs. ExPASy Swiss-Prot
Match: GSTX1_SOLTU (Probable glutathione S-transferase OS=Solanum tuberosum GN=PRP1 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.862e-36
Identity = 85/179 (47.49%), Postives = 112/179 (62.57%), Query Frame = 1
Query:    7 RVRIALAEKGVKYEYKEQDLFNKSPLLLRMNPVHKKIPVLIHNGKSVCESSIIVQYIDEVWKDKAPLLPYDPYQRAQARFWVDFIDKKMYDTSRKTWATKGEEQEAAKKEFIEVLKTLEGELGDKPFFGGDNFGYVDLCL--IPYYCWFYSYETFGKFSVEAECPKFIAW-VKRCLQRE 534
            RV  AL  KGVKYE+ E+DL NKSPLLL+ NP+HKKIPVLIHNGK +CES +I++YIDE ++  + +LP DPY RA ARFW  +++ K      K++ +KGEEQE AK+E  E+LK L+ E  DK  F GD FG+ D+       Y       +    +   + P F AW  + C Q E
Sbjct:   17 RVEWALKIKGVKYEFIEEDLQNKSPLLLQSNPIHKKIPVLIHNGKCICESMVILEYIDEAFEGPS-ILPKDPYDRALARFWAKYVEDK-GAAVWKSFFSKGEEQEKAKEEAYEMLKILDNEFKDKKCFVGDKFGFADIVANGAALYLGILEEVSGIVLATSEKFPNFCAWRDEYCTQNE 193          
BLAST of BQ623411 vs. ExPASy Swiss-Prot
Match: GSTU6_ORYSJ (Probable glutathione S-transferase GSTU6 OS=Oryza sativa subsp. japonica GN=GSTU6 PE=2 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 2.689e-35
Identity = 88/209 (42.11%), Postives = 121/209 (57.89%), Query Frame = 1
Query:    4 IRVRIALAEKGVKYEYKEQDLFNKSPLLLRMNPVHKKIPVLIHNGKSVCESSIIVQYIDEVWKDKA----PLLPYDPYQRAQARFWVDFIDKKMYDTSRKTW------ATKGEEQEAAKKEFIEVLKTLEGELGD----KPFFGGDNFGYVDLCLIPYYCWFYSYE-TFGKFSVE-AECPKFIAWVKRCLQRETVAKALPDE-KKVFEF 579
            IRVR+ L  K + YEY E++L +KS LLL  NPVHK +PVL+H G+ V ES +IVQYIDEVW   A     ++P DPY+RA ARFW  ++D K+    R  W      +   EE+ AA  + +  L+TLEG  G+    KPFFGGD  G+VD+ L  Y  WF + +   G+  ++ A  P   AW +R    +     +PD+  K+ EF
Sbjct:   19 IRVRVVLNLKSLPYEYVEENLGDKSDLLLASNPVHKSVPVLLHAGRPVNESQVIVQYIDEVWPGGAGGRPSVMPSDPYERAVARFWAAYVDDKV----RPAWLAILFGSKTEEERAAAVAQAVAALETLEGAFGECSKGKPFFGGDGVGFVDVVLGGYLGWFTAIDKLIGRRLIDPARTPALAAWEERFRATDAAKGVVPDDADKLLEF 223          
BLAST of BQ623411 vs. ExPASy Swiss-Prot
Match: GSTXA_ARATH (Glutathione S-transferase 103-1A OS=Arabidopsis thaliana GN=103-1A PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.130e-33
Identity = 78/198 (39.39%), Postives = 122/198 (61.62%), Query Frame = 1
Query:    7 RVRIALAEKGVKYEYKEQDLFNKSPLLLRMNPVHKKIPVLIHNGKSVCESSIIVQYIDEVWKDKAPLLPYDPYQRAQARFWVDFIDKKMYDTSRKTWATKGEE-QEAAKKEFIEVLKTLEGELGDKPFFGGDNFGYVDL---CLIPYYCWFYSYETFG-KFSVEAECPKFIAWVKRCLQRETVAKALPDEKKVFEFVS 585
            RV +AL  KG+ YEY E+ L NKSPLLL +NP+HKK+PVL+HNGK++ ES +I++YIDE W    P+LP DPY+R++ARF+   +D+++ +    + A   E+ +E   ++  E++  LE EL  K +FGG   G++D     LIP +C    +E  G +   E + P+F  WV+   + E V   +P  ++  E ++
Sbjct:   20 RVEMALKLKGIPYEYVEEILENKSPLLLALNPIHKKVPVLVHNGKTILESHVILEYIDETWPQN-PILPQDPYERSKARFFAKLVDEQIMNVGFISMARADEKGREVLAEQVRELIMYLEKELVGKDYFGGKTVGFLDFVAGSLIP-FCLERGWEGIGLEVITEEKFPEFKRWVRNLEKVEIVKDCVPPREEHVEHMN 215          
BLAST of BQ623411 vs. ExPASy Swiss-Prot
Match: GSTX2_MAIZE (Probable glutathione S-transferase BZ2 OS=Zea mays GN=BZ2 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.751e-18
Identity = 73/209 (34.93%), Postives = 105/209 (50.24%), Query Frame = 1
Query:    7 RVRIALAEKGVKYEYKEQDLF-NKSPLLLRMNPVHKKIPVLI-HNGKSVCESSIIVQYIDEVWKDKAP------LLPYDPYQRAQARFWVDFIDKKMYDT--SRKTWATKGEEQEAAKKEFIEVLKTLEGELGDKP-----FFGGDNF-GYVDLCLIPYYCWFYSYETFGKFSV--EAECPKFIAWVKRCLQRETVAKALPDEKKVFEF 579
            R R+AL  +GV YE  ++ L   KS  LL  NPV+ KIPVL+  +G+++CES++IVQYI++V ++         LLP DPY+RA  RFW  FID K +    +     T G   +AA ++    L  LE    D+      F GGD   G +DL L  +     + E     S+   +  P    W +R        + LPD +KV +F
Sbjct:   14 RARLALDLRGVAYELLDEPLGPKKSDRLLAANPVYGKIPVLLLPDGRAICESAVIVQYIEDVARESGGAEAGSLLLPDDPYERAMHRFWTAFIDDKFWPALDAVSLAPTPGARAQAA-EDTRAALSLLEEAFKDRSNGRAFFSGGDAAPGLLDLALGCFLPALRACERLHGLSLIDASATPLLDGWSQRFAAHPAAKRVLPDTEKVVQF 221          
BLAST of BQ623411 vs. ExPASy Swiss-Prot
Match: SSPA_SHIFL (Stringent starvation protein A OS=Shigella flexneri GN=sspA PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 6.887e-15
Identity = 48/142 (33.80%), Postives = 75/142 (52.82%), Query Frame = 1
Query:    7 RVRIALAEKGVKYEYKEQDLFNKSPLLLRMNPVHKKIPVLIHNGKSVCESSIIVQYIDEVWKDKAPLLPYDPYQRAQARFWVDFIDKKMYDTSRKTWATKGEEQEAAKKEFIEVLKTLEGELGDKPFFGGDNFGYVDLCLIP 432
            +VRI LAEKGV +E +  +  N    L+ +NP ++ +P L+    ++ ES II++Y+DE +    PL+P  P  R ++R ++  I+K  Y            E +AA+K+  E L  +    G KP+F  D F  VD  L P
Sbjct:   24 QVRIVLAEKGVSFEIEHVEKDNPPQDLIDLNP-NQSVPTLVDRELTLWESRIIMEYLDERFPHP-PLMPVYPVARGESRLYMHRIEKDWYTLMNTIINGSASEADAARKQLREELLAIAPVFGQKPYFLSDEFSLVDCYLAP 163          
BLAST of BQ623411 vs. ExPASy Swiss-Prot
Match: SSPA_ECOLI (Stringent starvation protein A OS=Escherichia coli (strain K12) GN=sspA PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 6.887e-15
Identity = 48/142 (33.80%), Postives = 75/142 (52.82%), Query Frame = 1
Query:    7 RVRIALAEKGVKYEYKEQDLFNKSPLLLRMNPVHKKIPVLIHNGKSVCESSIIVQYIDEVWKDKAPLLPYDPYQRAQARFWVDFIDKKMYDTSRKTWATKGEEQEAAKKEFIEVLKTLEGELGDKPFFGGDNFGYVDLCLIP 432
            +VRI LAEKGV +E +  +  N    L+ +NP ++ +P L+    ++ ES II++Y+DE +    PL+P  P  R ++R ++  I+K  Y            E +AA+K+  E L  +    G KP+F  D F  VD  L P
Sbjct:   24 QVRIVLAEKGVSFEIEHVEKDNPPQDLIDLNP-NQSVPTLVDRELTLWESRIIMEYLDERFPHP-PLMPVYPVARGESRLYMHRIEKDWYTLMNTIINGSASEADAARKQLREELLAIAPVFGQKPYFLSDEFSLVDCYLAP 163          
BLAST of BQ623411 vs. ExPASy Swiss-Prot
Match: SSPA_ECOL6 (Stringent starvation protein A OS=Escherichia coli O6 GN=sspA PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 6.887e-15
Identity = 48/142 (33.80%), Postives = 75/142 (52.82%), Query Frame = 1
Query:    7 RVRIALAEKGVKYEYKEQDLFNKSPLLLRMNPVHKKIPVLIHNGKSVCESSIIVQYIDEVWKDKAPLLPYDPYQRAQARFWVDFIDKKMYDTSRKTWATKGEEQEAAKKEFIEVLKTLEGELGDKPFFGGDNFGYVDLCLIP 432
            +VRI LAEKGV +E +  +  N    L+ +NP ++ +P L+    ++ ES II++Y+DE +    PL+P  P  R ++R ++  I+K  Y            E +AA+K+  E L  +    G KP+F  D F  VD  L P
Sbjct:   24 QVRIVLAEKGVSFEIEHVEKDNPPQDLIDLNP-NQSVPTLVDRELTLWESRIIMEYLDERFPHP-PLMPVYPVARGESRLYMHRIEKDWYTLMNTIINGSASEADAARKQLREELLAIAPVFGQKPYFLSDEFSLVDCYLAP 163          
BLAST of BQ623411 vs. ExPASy Swiss-Prot
Match: SSPA_ECO57 (Stringent starvation protein A OS=Escherichia coli O157:H7 GN=sspA PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 6.887e-15
Identity = 48/142 (33.80%), Postives = 75/142 (52.82%), Query Frame = 1
Query:    7 RVRIALAEKGVKYEYKEQDLFNKSPLLLRMNPVHKKIPVLIHNGKSVCESSIIVQYIDEVWKDKAPLLPYDPYQRAQARFWVDFIDKKMYDTSRKTWATKGEEQEAAKKEFIEVLKTLEGELGDKPFFGGDNFGYVDLCLIP 432
            +VRI LAEKGV +E +  +  N    L+ +NP ++ +P L+    ++ ES II++Y+DE +    PL+P  P  R ++R ++  I+K  Y            E +AA+K+  E L  +    G KP+F  D F  VD  L P
Sbjct:   24 QVRIVLAEKGVSFEIEHVEKDNPPQDLIDLNP-NQSVPTLVDRELTLWESRIIMEYLDERFPHP-PLMPVYPVARGESRLYMHRIEKDWYTLMNTIINGSASEADAARKQLREELLAIAPVFGQKPYFLSDEFSLVDCYLAP 163          
BLAST of BQ623411 vs. ExPASy Swiss-Prot
Match: GSTO1_HUMAN (Glutathione S-transferase omega-1 OS=Homo sapiens GN=GSTO1 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 3.199e-12
Identity = 55/189 (29.10%), Postives = 87/189 (46.03%), Query Frame = 1
Query:    7 RVRIALAEKGVKYEYKEQDLFNKSPLLLRMNPVHKKIPVLIHN-GKSVCESSIIVQYIDEVWKDKAPLLPYDPYQRAQARFWVDFIDKKMYDTSRKTWATKGEEQEAAKKEFIEVLKTLEGELGDK--PFFGGDNFGYVDLCLIPYYCWFYSYETFGKFSVEAECPKFIAWVKRCLQRETVAKALPDEK 564
            R R+ L  KG+++E    +L NK     + NP    +PVL ++ G+ + ES+I  +Y+DE +  K  LLP DPY++A  +  ++   K          +   E+    K+EF +    LE  L +K   FFGG++   +D  + P   WF   E           PK   W+    +  TV+  L  EK
Sbjct:   37 RTRLVLKAKGIRHEVININLKNKPEWFFKKNP-FGLVPVLENSQGQLIYESAITCEYLDEAYPGK-KLLPDDPYEKACQKMILELFSKVPSLVGSFIRSQNKEDYAGLKEEFRKEFTKLEEVLTNKKTTFFGGNSISMIDYLIWP---WFERLEAMKLNECVDHTPKLKLWMAAMKEDPTVSALLTSEK 220          
The following BLAST results are available for this feature:
BLAST of BQ623411 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
GSTX6_SOYBN4.901e-3742.27Probable glutathione S-transferase OS=Glycine max ... [more]
GSTX1_SOLTU1.862e-3647.49Probable glutathione S-transferase OS=Solanum tube... [more]
GSTU6_ORYSJ2.689e-3542.11Probable glutathione S-transferase GSTU6 OS=Oryza ... [more]
GSTXA_ARATH1.130e-3339.39Glutathione S-transferase 103-1A OS=Arabidopsis th... [more]
GSTX2_MAIZE1.751e-1834.93Probable glutathione S-transferase BZ2 OS=Zea mays... [more]
SSPA_SHIFL6.887e-1533.80Stringent starvation protein A OS=Shigella flexner... [more]
SSPA_ECOLI6.887e-1533.80Stringent starvation protein A OS=Escherichia coli... [more]
SSPA_ECOL66.887e-1533.80Stringent starvation protein A OS=Escherichia coli... [more]
SSPA_ECO576.887e-1533.80Stringent starvation protein A OS=Escherichia coli... [more]
GSTO1_HUMAN3.199e-1229.10Glutathione S-transferase omega-1 OS=Homo sapiens ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00502 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00502 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623411 ID=BQ623411; Name=BQ623411; organism=Citrus sinensis; type=EST; length=590bp
GGGATAAGGGTCAGGATTGCTCTGGCAGAGAAAGGCGTCAAGTATGAGTA
CAAAGAACAGGACTTGTTCAACAAGAGCCCGCTGCTTCTGCGGATGAATC
CCGTCCACAAGAAGATCCCGGTTCTTATCCATAATGGCAAATCGGTCTGT
GAGTCATCCATCATTGTTCAGTACATTGATGAAGTCTGGAAGGACAAGGC
TCCATTGCTTCCCTACGATCCTTACCAAAGAGCTCAAGCGAGGTTCTGGG
TCGATTTTATTGACAAGAAGATGTACGATACTTCGAGGAAGACATGGGCC
ACAAAGGGAGAAGAGCAGGAGGCAGCAAAGAAGGAGTTCATCGAAGTTCT
GAAGACCTTGGAAGGGGAGCTTGGAGACAAGCCTTTTTTCGGAGGAGACA
ACTTTGGGTATGTGGATTTGTGTTTGATCCCGTACTATTGTTGGTTTTAT
TCGTATGAGACATTTGGAAAGTTCAGCGTTGAGGCTGAGTGCCCCAAATT
CATTGCTTGGGTGAAGAGATGCTTGCAGAGAGAGACTGTTGCCAAGGCAC
TTCCTGATGAGAAAAAAGTGTTTGAATTTGTTTCAGTGTT
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