BQ623411

Overview
NameBQ623411
Unique NameBQ623411
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length590
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2115 contig Csv1_Contig2115:110..699. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of BQ623411 vs. ExPASy Swiss-Prot
Match: GSTZ1_DIACA (Glutathione S-transferase 1 OS=Dianthus caryophyllus GN=GST1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.619e-11
Identity = 52/161 (32.30%), Postives = 81/161 (50.31%), Query Frame = 1 
Query:    7 RVRIALAEKGVKYEYKEQDLF---NKSPLLLRMNPVHKKIPVLIHNGKSVCESSIIVQYIDEVWKDKAPLLPYDPYQRA----------------QARFWVDFIDKKMYDTSRKTWATKGEEQEAAKKEFIEVLKTLEGELGDKPFFGGDNFGYVDLCLIP 432
            RVRIAL  KG+ +EYK  DLF   + +P  L++NP+   +PVL+H    + +S  I+ Y++E + +  PLLP D  +RA                Q    +++I++K+    + +WA     +   KK F  + K L+G  G   +  GD  G  DL L P
Sbjct:   22 RVRIALHLKGLDFEYKAVDLFKGEHLTPEFLKLNPL-GYVPVLVHGDIVIADSLAIIMYLEEKFPEN-PLLPQDLQKRALNYQAANIVTSNIQPLQNLAVLNYIEEKLGSDEKLSWA-----KHHIKKGFSALEKLLKGHAG--KYATGDEVGLADLFLAP 173
The following BLAST results are available for this feature:
BLAST of BQ623411 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
GSTZ1_DIACA4.619e-1132.30Glutathione S-transferase 1 OS=Dianthus caryophyll... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00502 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00502 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623411 ID=BQ623411; Name=BQ623411; organism=Citrus sinensis; type=EST; length=590bp
GGGATAAGGGTCAGGATTGCTCTGGCAGAGAAAGGCGTCAAGTATGAGTA
CAAAGAACAGGACTTGTTCAACAAGAGCCCGCTGCTTCTGCGGATGAATC
CCGTCCACAAGAAGATCCCGGTTCTTATCCATAATGGCAAATCGGTCTGT
GAGTCATCCATCATTGTTCAGTACATTGATGAAGTCTGGAAGGACAAGGC
TCCATTGCTTCCCTACGATCCTTACCAAAGAGCTCAAGCGAGGTTCTGGG
TCGATTTTATTGACAAGAAGATGTACGATACTTCGAGGAAGACATGGGCC
ACAAAGGGAGAAGAGCAGGAGGCAGCAAAGAAGGAGTTCATCGAAGTTCT
GAAGACCTTGGAAGGGGAGCTTGGAGACAAGCCTTTTTTCGGAGGAGACA
ACTTTGGGTATGTGGATTTGTGTTTGATCCCGTACTATTGTTGGTTTTAT
TCGTATGAGACATTTGGAAAGTTCAGCGTTGAGGCTGAGTGCCCCAAATT
CATTGCTTGGGTGAAGAGATGCTTGCAGAGAGAGACTGTTGCCAAGGCAC
TTCCTGATGAGAAAAAAGTGTTTGAATTTGTTTCAGTGTT
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