BQ623415

Overview
NameBQ623415
Unique NameBQ623415
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length689
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig22 contig Csv1_Contig22:1..689. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623415 vs. ExPASy Swiss-Prot
Match: GSO1_ARATH (LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.939e-20
Identity = 60/176 (34.09%), Postives = 100/176 (56.82%), Query Frame = 3
Query:    9 LALGASRAIAYLHSKG-PANSHGNIKSSNILLSKSYEARVSDFGLAHLASPSSTPNRID--------GYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTA--EVFDLELLRYQNVEEEMV-QLLQLAINCTAQYPDNRPSMAEVTSQI 500
            +A+G ++ + YLH    P   H +IKSSN+LL  + EA + DFGLA + + +   N           GY APE   + K ++K+DVYS G++L+E++TGK PT ++   E +D+ RWV++ ++   +A  ++ D +L      EE+   Q+L++A+ CT   P  RPS  +    +
Sbjct: 1061 IAVGLAQGVEYLHHDCVPPIVHRDIKSSNVLLDSNMEAHLGDFGLAKVLTENCDTNTDSNTWFACSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKMPTDSVFGAE-MDMVRWVETHLEVAGSARDKLIDPKLKPLLPFEEDAACQVLEIALQCTKTSPQERPSSRQACDSL 1235          
BLAST of BQ623415 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.307e-20
Identity = 66/192 (34.38%), Postives = 109/192 (56.77%), Query Frame = 3
Query:    9 LALGASRAIAYLHSK-GPANSHGNIKSSNILLSKSYEARVSDFGLAH-----LASPSSTPNRIDGYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEMV-QLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSLQQGQAHDLENGSS 563
            +A  A++ + YLH+   P+  H ++KSSNILL  +  A+VSDFGL+      L   SS      GY  PE   ++++++K+DVYSFGV+L ELL+GK P  A      +++  W +S++++     + D  +    NV+ E V ++ ++A  C  Q   NRP M EV   I++  R  +++G  + L++ SS
Sbjct:  708 IAQDAAKGLEYLHTGCNPSIIHRDVKSSNILLDINMRAKVSDFGLSRQTEEDLTHVSSVAKGTVGYLDPEYYASQQLTEKSDVYSFGVVLFELLSGKKPVSAEDFGPELNIVHWARSLIRKGDVCGIIDPCIA--SNVKIESVWRVAEVANQCVEQRGHNRPRMQEVIVAIQDAIR--IERGNENGLKSSSS 895          
BLAST of BQ623415 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 3.307e-20
Identity = 63/171 (36.84%), Postives = 93/171 (54.39%), Query Frame = 3
Query:    9 LALGASRAIAYLHSKGPANS-HGNIKSSNILLSKSYEARVSDFGLAHLASPSST--PNRIDG---YRAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIE 503
            + +G +R +AYLH +      H +IK++N+LL K    ++SDFGLA L    ST    RI G   Y APE      ++ KADVYSFG++ LE++ G++            L  WV+ + ++    E+ D  L    N EE M  ++Q+AI CT+  P  RPSM+EV   +E
Sbjct:  727 ICIGVARGLAYLHEESRLKIVHRDIKATNVLLDKQLNPKISDFGLAKLDEEDSTHISTRIAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVHGRSNKIERSKNNTFYLIDWVEVLREKNNLLELVDPRLGSEYNREEAMT-MIQIAIMCTSSEPCERPSMSEVVKMLE 896          
BLAST of BQ623415 vs. ExPASy Swiss-Prot
Match: Y1341_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 3.307e-20
Identity = 65/186 (34.95%), Postives = 108/186 (58.06%), Query Frame = 3
Query:    9 LALGASRAIAYLHSKG-PANSHGNIKSSNILLSKSYEARVSDFGLAHLASPS----STPNRIDG---YRAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKE-EWTAEVFDLELLRY-QNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSLQQGQ 536
            +A+GA++ +AYLH    PA  H ++K +NILL   YEA ++DFGLA L   S    +  +R+ G   Y APE      +++K+DVYS+GV+LLE+L+G++  +  +  +G+ +  WV+  +   E    V D++L      + +EM+Q L +A+ C    P  RP+M EV + + E+  S  + G+
Sbjct:  877 IAIGAAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAILADFGLAKLMMNSPNYHNAMSRVAGSYGYIAPEYGYTMNITEKSDVYSYGVVLLEILSGRSAVEPQIG-DGLHIVEWVKKKMGTFEPALSVLDVKLQGLPDQIVQEMLQTLGIAMFCVNPSPVERPTMKEVVTLLMEVKCSPEEWGK 1061          
BLAST of BQ623415 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.307e-20
Identity = 66/180 (36.67%), Postives = 95/180 (52.78%), Query Frame = 3
Query:    9 LALGASRAIAYLHSKG-PANSHGNIKSSNILLSKSYEARVSDFGLAHLASPSSTPNRID----------GYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQN-VEEEMVQLL-QLAINCTAQYPDNRPSMAEVTSQIEEI 509
            +A   +  +AYLHS   P   H ++KSSNILL +   A+VSDFGL+ L   + T N             GY  PE     +++ K+DVYSFGV+LLE++T K        EE V+L  ++  ++ +E   E  D  L +  N ++ + +Q L  LA  C  +   NRPSM EV  +IE I
Sbjct:  467 IAYQTAEGLAYLHSAAQPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVDLTETANNESHIFTGAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLLEMVTSKKAIDFTREEEDVNLVMYINKMMDQERLTECIDPLLKKTANKIDMQTIQQLGNLASACLNERRQNRPSMKEVADEIEYI 646          
BLAST of BQ623415 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.319e-20
Identity = 64/174 (36.78%), Postives = 101/174 (58.05%), Query Frame = 3
Query:    9 LALGASRAIAYLHSK-GPANSHGNIKSSNILLSKSYEARVSDFGLAHLASP-----SSTPNRIDGYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQ--ALLNEEGVDLPRWVQSVVKEEWTAEVFDLEL-LRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIE 503
            +A+GA+R + YLH +  P   H ++K++NILL + +EA V DFGLA L +      ++      G+ APE     + S+K DV+ FG+LLLEL+TG    +    ++++G  L  WV+ + KE    E+ D EL   Y  +  E+ ++LQ+A+ CT   P +RP M+EV   +E
Sbjct:  399 IAIGAARGLFYLHEQCDPKIIHRDVKAANILLDEYFEAVVGDFGLAKLLNHEDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSVSQKGAML-EWVRKLHKEMKVEELVDRELGTTYDRI--EVGEMLQVALLCTQFLPAHRPKMSEVVQMLE 569          
BLAST of BQ623415 vs. ExPASy Swiss-Prot
Match: Y5815_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g58150 OS=Arabidopsis thaliana GN=At5g58150 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.641e-20
Identity = 61/169 (36.09%), Postives = 95/169 (56.21%), Query Frame = 3
Query:    9 LALGASRAIAYLHSKG-PANSHGNIKSSNILLSKSYEARVSDFGLAHLASPSSTPNR-IDGYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEI 509
            +ALG +RA+A+LH    P   HG +K++ ILL  S E R++DFGL  L       +  +DGY  PE       + ++DVYSFGV+LLEL++GK P       EG DL  WV+ +V++       D   ++    E+E+ + +++   CTA  P  RP+M +V   +++I
Sbjct:  622 IALGTARALAFLHHGCIPPMVHGEVKAATILLDSSQEPRLADFGLVKLLDEQFPGSESLDGYTPPEQERNASPTLESDVYSFGVVLLELVSGKKP-------EG-DLVNWVRGLVRQGQGLRAID-PTMQETVPEDEIAEAVKIGYLCTADLPWKRPTMQQVVGLLKDI 781          
BLAST of BQ623415 vs. ExPASy Swiss-Prot
Match: SRF4_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsis thaliana GN=SRF4 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.368e-20
Identity = 62/168 (36.90%), Postives = 87/168 (51.79%), Query Frame = 3
Query:    9 LALGASRAIAYLHSK-GPANSHGNIKSSNILLSKSYEARVSDFGLAHLASPSSTPNRIDGYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEI 509
            +ALG ++AI YLH    P   H NIKSSNILL      R+SD+GLA+    +S  N   GY APE TD    +QK+DVYSFGV++LELLTG+ P  +   +    L RW +  +K+  T +      L      E +     +   C    P  RP ++ V   ++ +
Sbjct:  520 IALGTAKAIEYLHETCSPPLVHKNIKSSNILLDNELNPRLSDYGLANFHHRTSQ-NLGVGYNAPECTDPSAYTQKSDVYSFGVVMLELLTGRKPYDSGRPKAEQSLVRWAKPQLKDMDTLDEMVDPALCGLYAPESVSSFADIVSICVMTEPGLRPPVSNVVEALKRL 686          
BLAST of BQ623415 vs. ExPASy Swiss-Prot
Match: RPK1_IPONI (Receptor-like protein kinase OS=Ipomoea nil GN=INRPK1 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 7.368e-20
Identity = 67/179 (37.43%), Postives = 95/179 (53.07%), Query Frame = 3
Query:    9 LALGASRAIAYLHSK-GPANSHGNIKSSNILLSKSYEARVSDFGLAHLAS------PSSTPNRIDGYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWT-----AEVFD---LELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQI 500
            +A+G +  +AYLH    PA  H +IK  NILL    E  +SDFG+A L        PS+T     GY APE       S+++DVYS+GV+LLEL+T K       N E  D+  WV+SV    WT      ++ D   L+ L   +V E++ + L LA+ C  +  D RP+M +V  Q+
Sbjct:  919 IAVGTAHGLAYLHFDCDPAIVHRDIKPMNILLDSDLEPHISDFGIAKLLDQSATSIPSNTVQGTIGYMAPENAFTTVKSRESDVYSYGVVLLELITRKKALDPSFNGE-TDIVGWVRSV----WTQTGEIQKIVDPSLLDELIDSSVMEQVTEALSLALRCAEKEVDKRPTMRDVVKQL 1092          
BLAST of BQ623415 vs. ExPASy Swiss-Prot
Match: RPK1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RPK1 OS=Arabidopsis thaliana GN=RPK1 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.368e-20
Identity = 63/180 (35.00%), Postives = 96/180 (53.33%), Query Frame = 3
Query:    9 LALGASRAIAYLHSK-GPANSHGNIKSSNILLSKSYEARVSDFGLAHLASPSSTPNRID-----GYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQALL--NEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSL 524
            +AL  +RA++YLH +  P   H +IK SNILL  +Y A +SDFGL+ L   S +          GY APE     +VS+KADVYS+G++LLEL++ K         +E G ++  W   ++ +    EVF   L       +++V++L LA+ CT      RP+M +    ++ I  S L
Sbjct:  362 IALDVARALSYLHEQCSPKVLHRDIKPSNILLDNNYNAYLSDFGLSKLLGTSQSHVTTGVAGTFGYVAPEYAMTCRVSEKADVYSYGIVLLELISDKRALDPSFSSHENGFNIVSWAHMMLSQGKAKEVFTTGLWE-TGPPDDLVEVLHLALKCTVDSLSIRPTMKQAVRLLKRIQPSRL 540          
The following BLAST results are available for this feature:
BLAST of BQ623415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 251
Match NameE-valueIdentityDescription
GSO1_ARATH1.939e-2034.09LRR receptor-like serine/threonine-protein kinase ... [more]
Y1677_ARATH3.307e-2034.38Probable LRR receptor-like serine/threonine-protei... [more]
Y1534_ARATH3.307e-2036.84Probable LRR receptor-like serine/threonine-protei... [more]
Y1341_ARATH3.307e-2034.95Probable LRR receptor-like serine/threonine-protei... [more]
WAKLQ_ARATH3.307e-2036.67Wall-associated receptor kinase-like 20 OS=Arabido... [more]
Y2239_ARATH4.319e-2036.78Probable LRR receptor-like serine/threonine-protei... [more]
Y5815_ARATH5.641e-2036.09Probably inactive leucine-rich repeat receptor-lik... [more]
SRF4_ARATH7.368e-2036.90Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsi... [more]
RPK1_IPONI7.368e-2037.43Receptor-like protein kinase OS=Ipomoea nil GN=INR... [more]
RPK1_ARATH7.368e-2035.00Probable LRR receptor-like serine/threonine-protei... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00506 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00506 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623415 ID=BQ623415; Name=BQ623415; organism=Citrus sinensis; type=EST; length=689bp
GGTCTGGCCTTGCTCTTGGAGCATCACGAGCGATTGCATACCTCCATTCA
AAGGGTCCTGCAAACTCTCATGGAAACATCAAGTCATCGAATATCCTCCT
ATCTAAATCCTATGAAGCTCGAGTTTCTGATTTTGGCCTTGCTCATCTTG
CGAGTCCCTCATCCACCCCCAACAGAATTGATGGCTACCGTGCCCCAGAG
GTGACAGACGCTCGCAAGGTATCCCAAAAAGCAGATGTCTACAGCTTTGG
TGTTTTGCTTCTGGAATTGCTTACAGGCAAGGCACCTACACAAGCCTTGC
TGAACGAGGAAGGAGTGGACCTCCCAAGATGGGTCCAATCTGTTGTAAAA
GAAGAGTGGACTGCCGAGGTTTTTGACCTCGAGCTTCTGAGATACCAAAA
TGTTGAGGAGGAGATGGTTCAACTCTTACAGCTTGCCATTAATTGCACCG
CTCAATATCCCGACAACCGCCCTTCCATGGCAGAAGTGACAAGCCAAATT
GAAGAAATCTGCCGGTCTAGCTTACAACAAGGACAAGCCCATGATTTGGA
AAACGGGTCTTCCTAGTAAGCTTATTCAATCGATTACCGTGAGCCTTCAC
CTTCAGTAATGGCCTGAAGAAGATGAGCAATCTTTCATTTGTTATCCCAG
TTTTATCATGCTAATCTAGTTCTTTAATTGTTGGGTAAA
back to top