BQ623429

Overview
NameBQ623429
Unique NameBQ623429
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length553
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5616 contig Csv1_Contig5616:104..656. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623429 vs. ExPASy Swiss-Prot
Match: SEC13_ASPNC (Protein transport protein sec13 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=sec13 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 5.546e-21
Identity = 54/114 (47.37%), Postives = 75/114 (65.79%), Query Frame = 3
Query:    6 DNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTV-AREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGEWRQV 344
            DN +K+W         +    L+ H+DWVRDVAW+P++ L KS IASAS+D  V IWT  A    QW  + L +F T ++RVSWS +GNILAV+ G+N V+LW+E + G+W +V
Sbjct:  192 DNLLKIWDYNPETKTYNNTQTLEGHSDWVRDVAWSPSV-LSKSYIASASQDKTVRIWTSDASNPGQWTSQQL-EFDTVLWRVSWSPSGNILAVSGGDNKVSLWKENLKGQWEKV 303          
BLAST of BQ623429 vs. ExPASy Swiss-Prot
Match: SEC13_ASPTN (Protein transport protein sec13 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=sec13 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 7.243e-21
Identity = 53/114 (46.49%), Postives = 75/114 (65.79%), Query Frame = 3
Query:    6 DNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTV-AREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGEWRQV 344
            DN +K+W         +    L+ H+DWVRDVAW+P++ L KS IASAS+D  V IWT  A    QW  + L +F + ++RVSWS +GNILAV+ G+N V+LW+E + G+W +V
Sbjct:  193 DNLLKIWDYNPETKTYNLSQTLEGHSDWVRDVAWSPSI-LSKSYIASASQDKTVRIWTSDASNPGQWTSQQL-EFDSVLWRVSWSPSGNILAVSGGDNKVSLWKENLKGQWEKV 304          
BLAST of BQ623429 vs. ExPASy Swiss-Prot
Match: SEC13_ASHGO (Protein transport protein SEC13 OS=Ashbya gossypii GN=SEC13 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 9.460e-21
Identity = 49/118 (41.53%), Postives = 71/118 (60.17%), Query Frame = 3
Query:    6 DNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTP--VYRVSWSLTGNILAVADGNNNVTLWEEAVDGEWRQVTAV 353
            DN VK+WK             L  H DWVRDVAW+P++ LP++ +A+ S+D   IIWT       W   +L + K P  ++R SWSL+GNILA++ G+N VTLW+E ++G+W     +
Sbjct:  177 DNLVKIWKYNPEANTYLLEDTLAAHADWVRDVAWSPSV-LPRAYLATVSQDRTCIIWTQENNQGPWTKTLLKEDKFPDVLWRASWSLSGNILALSGGDNKVTLWKENLEGKWESAAEI 293          
BLAST of BQ623429 vs. ExPASy Swiss-Prot
Match: SEC13_PICST (Protein transport protein SEC13 OS=Pichia stipitis GN=SEC13 PE=3 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 2.107e-20
Identity = 53/120 (44.17%), Postives = 79/120 (65.83%), Query Frame = 3
Query:    6 DNTVKVWKL--YNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTP--VYRVSWSLTGNILAVADGNNNVTLWEEAVDGEWRQVTAV 353
            DN  K+WK    N  +  +    L+ HTDWVRDVAW+P++ L ++ IA+AS+D  V+IWT  + G +W+ ++L + K P   +R SWSL+GNILAV+ G+N V+LW+E + G+W     V
Sbjct:  185 DNLAKIWKYDAANNTYVEEA--RLEGHTDWVRDVAWSPSM-LVRTYIATASQDRTVLIWTQDKAG-KWQKQLLTEDKFPDVCWRCSWSLSGNILAVSGGDNKVSLWKENLQGKWESAGEV 300          
BLAST of BQ623429 vs. ExPASy Swiss-Prot
Match: SEC13_COCIM (Protein transport protein SEC13 OS=Coccidioides immitis GN=SEC13 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 8.008e-20
Identity = 52/114 (45.61%), Postives = 72/114 (63.16%), Query Frame = 3
Query:    6 DNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREG-DQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGEWRQV 344
            DN VK+W              L+ HT WVRDV+W+P++ L +S IASAS+D  V IWT      ++W    L +F   V+RVSWSL+GNILAV+ G+N V+LW+E + G+W +V
Sbjct:  188 DNLVKIWDYNPETKTYATSHVLEGHTGWVRDVSWSPSI-LSRSYIASASQDKTVRIWTSDPSNPNEWTSHQL-EFDAVVWRVSWSLSGNILAVSGGDNKVSLWKENLKGQWEKV 299          
BLAST of BQ623429 vs. ExPASy Swiss-Prot
Match: SEC13_DEBHA (Protein transport protein SEC13 OS=Debaryomyces hansenii GN=SEC13 PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.330e-19
Identity = 50/118 (42.37%), Postives = 74/118 (62.71%), Query Frame = 3
Query:    6 DNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHD--FKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGEWRQVTAV 353
            DN  K+WK  +          L+ HTDWVRDV W+P++ L +S IA+AS+D  V+IW+    G +W+ ++L +  F    +R SWSL+GNILAV+ G+N V+LW+E + G+W     V
Sbjct:  181 DNLAKIWKFDSSKNAYIEEAVLEGHTDWVRDVCWSPSI-LIRSYIATASQDRTVLIWSQDNNG-KWQKQLLTEEMFPDVCWRCSWSLSGNILAVSGGDNKVSLWKENLQGKWESAGEV 296          
BLAST of BQ623429 vs. ExPASy Swiss-Prot
Match: SEC13_PHANO (Protein transport protein SEC13 OS=Phaeosphaeria nodorum GN=SEC13 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 3.974e-19
Identity = 53/116 (45.69%), Postives = 69/116 (59.48%), Query Frame = 3
Query:    6 DNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGEWRQVTAV 353
            D  VK+W              L  HTDWVRDVAW+P + L KS IASAS+D  V IWT +   D W+  VL+      +RVSWSL+GN+LAV+ G+N V+LW+E + G W  V  +
Sbjct:  188 DCQVKLWDFSAETGSWQSTQILTGHTDWVRDVAWSPTV-LSKSYIASASQDKTVRIWTSSDLRD-WKSTVLN-VDAVAWRVSWSLSGNVLAVSTGDNRVSLWKERLSGGWECVKTI 300          
BLAST of BQ623429 vs. ExPASy Swiss-Prot
Match: SC131_CANGA (Protein transport protein SEC13-1 OS=Candida glabrata GN=SEC131 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 8.854e-19
Identity = 49/118 (41.53%), Postives = 69/118 (58.47%), Query Frame = 3
Query:    6 DNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVL--HDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGEWRQVTAV 353
            DN VK+W+             L+ H+DWVRDVAW+P++ L +S IAS S+D    IWT       W    L   +F   ++R SWSL+GNILA++ G+N VTLW+E ++G+W     V
Sbjct:  180 DNLVKIWRYNPETQSYLVEDTLEGHSDWVRDVAWSPSV-LLRSYIASVSQDRTCNIWTQEDNTGPWVKTQLTPEEFPDVLWRASWSLSGNILAISGGDNKVTLWKENLNGKWESAGEV 296          
BLAST of BQ623429 vs. ExPASy Swiss-Prot
Match: SEC13_CRYNE (Protein transport protein SEC13 OS=Cryptococcus neoformans GN=SEC13 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.510e-18
Identity = 50/123 (40.65%), Postives = 66/123 (53.66%), Query Frame = 3
Query:    6 DNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVL---------HDFKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGEWRQVT 347
            DN +++W       K      ++ H DWVRDVAWAPN+GLP   IASAS+D  V+I +       W    L           F   V+RVSWSL GN+LAV+ G+  V+LW+E V   W  V+
Sbjct:  213 DNLIRIWGFDEEQKKWTEEETIKGHEDWVRDVAWAPNIGLPGMYIASASQDRTVLIHSRPSPSSSWTSAPLLPSLPQSQDPHFPDAVWRVSWSLAGNVLAVSCGDGKVSLWKEGVGKGWECVS 335          
BLAST of BQ623429 vs. ExPASy Swiss-Prot
Match: SEC13_PICGU (Protein transport protein SEC13 OS=Pichia guilliermondii GN=SEC13 PE=3 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 4.394e-18
Identity = 51/118 (43.22%), Postives = 70/118 (59.32%), Query Frame = 3
Query:    6 DNTVKVWKLYNGIWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASEDGKVIIWTVAREGDQWEGKVLHD--FKTPVYRVSWSLTGNILAVADGNNNVTLWEEAVDGEWRQVTAV 353
            DN  KVW L            L+ HTDWVRDV W+P+  L +S IA+AS+D  V+IW    EG +W+ + L +  F    +R SWS +GNILAV+ G+N V+LW+E + G+W     V
Sbjct:  173 DNLAKVWSLDASKSTYVEEAKLEGHTDWVRDVCWSPS-ALVRSYIATASQDRTVLIWHQDGEG-KWQKQKLTEELFPDVCWRCSWSFSGNILAVSGGDNKVSLWKENLQGKWESAGEV 288          
The following BLAST results are available for this feature:
BLAST of BQ623429 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
SEC13_ASPNC5.546e-2147.37Protein transport protein sec13 OS=Aspergillus nig... [more]
SEC13_ASPTN7.243e-2146.49Protein transport protein sec13 OS=Aspergillus ter... [more]
SEC13_ASHGO9.460e-2141.53Protein transport protein SEC13 OS=Ashbya gossypii... [more]
SEC13_PICST2.107e-2044.17Protein transport protein SEC13 OS=Pichia stipitis... [more]
SEC13_COCIM8.008e-2045.61Protein transport protein SEC13 OS=Coccidioides im... [more]
SEC13_DEBHA2.330e-1942.37Protein transport protein SEC13 OS=Debaryomyces ha... [more]
SEC13_PHANO3.974e-1945.69Protein transport protein SEC13 OS=Phaeosphaeria n... [more]
SC131_CANGA8.854e-1941.53Protein transport protein SEC13-1 OS=Candida glabr... [more]
SEC13_CRYNE1.510e-1840.65Protein transport protein SEC13 OS=Cryptococcus ne... [more]
SEC13_PICGU4.394e-1843.22Protein transport protein SEC13 OS=Pichia guillier... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00520 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00520 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623429 ID=BQ623429; Name=BQ623429; organism=Citrus sinensis; type=EST; length=553bp
GTTGTGATAATACCGTGAAGGTGTGGAAGCTGTACAATGGAATTTGGAAG
ATGGACTGCTTTCCAGCTCTTCAAATGCATACTGATTGGGTTAGAGATGT
TGCTTGGGCTCCCAACTTGGGGCTTCCAAAATCTACTATTGCAAGTGCAT
CGGAGGATGGGAAAGTTATTATATGGACTGTGGCCAGGGAAGGAGATCAA
TGGGAAGGTAAGGTGTTGCATGACTTCAAGACCCCTGTTTATAGAGTCAG
CTGGTCACTGACTGGAAACATATTGGCTGTGGCTGATGGAAACAACAATG
TAACACTGTGGGAAGAAGCAGTGGATGGGGAGTGGCGACAGGTGACTGCA
GTTGGGCCGTAAGACTCTTTTAAGTTTTTCAAATTTTTATCGTGAAATAC
AAGATTGCATTTTAGAACCTCTTTATAATTTCTTTTGAGGACCCTAAACC
GCAATCCCCACTCTTTTTATGTTACTGCATAGCTGAGCATCATTGATGGA
TATATCTGAACCCTAAATTTCTTAACTTTAGCTTCAACGAAGAATCTCCT
TTT
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