BQ623442
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623442 vs. ExPASy Swiss-Prot
Match: RBS2_PETHY (Ribulose bisphosphate carboxylase small chain SSU11A, chloroplastic OS=Petunia hybrida GN=RBCS PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 4.127e-36 Identity = 52/69 (75.36%), Postives = 62/69 (89.86%), Query Frame = 3 Query: 93 EHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 299 E+H+SP YYDGRYWTMWKLPM+GCTDATQVL E+ E +K YP++++RIIGFDN RQVQCISF+A KPPG Sbjct: 111 EYHASPRYYDGRYWTMWKLPMFGCTDATQVLGELQEAKKAYPNAWIRIIGFDNVRQVQCISFIAYKPPG 179 HSP 2 Score: 50.0618 bits (118), Expect = 4.127e-36 Identity = 21/29 (72.41%), Postives = 23/29 (79.31%), Query Frame = 2 Query: 2 EALLKEISYLLRSGWIPCLEFELEKGWVY 88 E LLKEI YLL GW+PCLEFE E G+VY Sbjct: 81 EQLLKEIEYLLNKGWVPCLEFETEHGFVY 109
BLAST of BQ623442 vs. ExPASy Swiss-Prot
Match: RBS1_PETHY (Ribulose bisphosphate carboxylase small chain SSU8, chloroplastic OS=Petunia hybrida GN=RBCS PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 4.127e-36 Identity = 52/69 (75.36%), Postives = 62/69 (89.86%), Query Frame = 3 Query: 93 EHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 299 E+H+SP YYDGRYWTMWKLPM+GCTDATQVL E+ E +K YP++++RIIGFDN RQVQCISF+A KPPG Sbjct: 111 EYHASPRYYDGRYWTMWKLPMFGCTDATQVLGELQEAKKAYPNAWIRIIGFDNVRQVQCISFIAYKPPG 179 HSP 2 Score: 50.0618 bits (118), Expect = 4.127e-36 Identity = 21/29 (72.41%), Postives = 23/29 (79.31%), Query Frame = 2 Query: 2 EALLKEISYLLRSGWIPCLEFELEKGWVY 88 E LLKEI YLL GW+PCLEFE E G+VY Sbjct: 81 EQLLKEIEYLLNKGWVPCLEFETEHGFVY 109
BLAST of BQ623442 vs. ExPASy Swiss-Prot
Match: RBS1_SOLLC (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Solanum lycopersicum GN=RBCS-1 PE=2 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 4.127e-36 Identity = 54/69 (78.26%), Postives = 61/69 (88.41%), Query Frame = 3 Query: 93 EHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 299 E++SSPGYYDGRYWTMWKLPM+GCTDATQVL EV E +K YP ++VRIIGFDN RQVQCISF+A KP G Sbjct: 112 ENNSSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRIIGFDNVRQVQCISFIAYKPEG 180 HSP 2 Score: 50.447 bits (119), Expect = 4.127e-36 Identity = 20/29 (68.97%), Postives = 25/29 (86.21%), Query Frame = 2 Query: 2 EALLKEISYLLRSGWIPCLEFELEKGWVY 88 E LL EI YLL++GW+PCLEFE E+G+VY Sbjct: 82 EQLLSEIEYLLKNGWVPCLEFETERGFVY 110
BLAST of BQ623442 vs. ExPASy Swiss-Prot
Match: RBS1_SOYBN (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Glycine max GN=RBCS-1 PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.129e-36 Identity = 52/69 (75.36%), Postives = 60/69 (86.96%), Query Frame = 3 Query: 93 EHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 299 EH+ SP YYDGRYWTMWKLPM+GCTDA+QVLKE+ E + YP+ F+RIIGFDN RQVQCISF+A KPPG Sbjct: 109 EHNRSPXYYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPPG 177 HSP 2 Score: 50.447 bits (119), Expect = 4.129e-36 Identity = 21/27 (77.78%), Postives = 23/27 (85.19%), Query Frame = 2 Query: 8 LLKEISYLLRSGWIPCLEFELEKGWVY 88 L KE+ YLLR GWIPCLEFELE G+VY Sbjct: 81 LAKEVEYLLRKGWIPCLEFELEHGFVY 107
BLAST of BQ623442 vs. ExPASy Swiss-Prot
Match: RBS0_SOLTU (Ribulose bisphosphate carboxylase small chain C, chloroplastic OS=Solanum tuberosum GN=RBCS-C PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.003e-36 Identity = 52/69 (75.36%), Postives = 59/69 (85.51%), Query Frame = 3 Query: 93 EHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 299 EH+SSPGYYDGRYWTMWKLPM+GCTD TQVL EV E + YP +++RIIGFDN RQVQCISF+A KP G Sbjct: 112 EHNSSPGYYDGRYWTMWKLPMFGCTDGTQVLAEVQEAKNAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 180 HSP 2 Score: 50.8322 bits (120), Expect = 7.003e-36 Identity = 20/29 (68.97%), Postives = 25/29 (86.21%), Query Frame = 2 Query: 2 EALLKEISYLLRSGWIPCLEFELEKGWVY 88 E LLKE+ YLL++GW+PCLEFE E G+VY Sbjct: 82 EQLLKEVEYLLKNGWVPCLEFETEHGFVY 110
BLAST of BQ623442 vs. ExPASy Swiss-Prot
Match: RBS1A_ARATH (Ribulose bisphosphate carboxylase small chain 1A, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1A PE=1 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 9.123e-36 Identity = 53/68 (77.94%), Postives = 62/68 (91.18%), Query Frame = 3 Query: 93 EHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 296 EH +SPGYYDGRYWTMWKLP++GCTD+ QVLKEV E +KEYP++F+RIIGFDN RQVQCISF+A KPP Sbjct: 109 EHGNSPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPNAFIRIIGFDNTRQVQCISFIAYKPP 176 HSP 2 Score: 45.8246 bits (107), Expect = 9.123e-36 Identity = 18/27 (66.67%), Postives = 23/27 (85.19%), Query Frame = 2 Query: 8 LLKEISYLLRSGWIPCLEFELEKGWVY 88 L KE+ YL+R+ WIPC+EFELE G+VY Sbjct: 81 LAKEVDYLIRNKWIPCVEFELEHGFVY 107
BLAST of BQ623442 vs. ExPASy Swiss-Prot
Match: RBS_GLYTO (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Glycine tomentella GN=RBCS PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.127e-36 Identity = 51/68 (75.00%), Postives = 60/68 (88.24%), Query Frame = 3 Query: 93 EHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 296 E+H SPGYYDGRYWTMWKLP++GCTDA+QVLKE+ E + YP+ F+RIIGFDN RQVQCISF+A KPP Sbjct: 109 ENHRSPGYYDGRYWTMWKLPVFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPP 176 HSP 2 Score: 50.447 bits (119), Expect = 9.127e-36 Identity = 21/27 (77.78%), Postives = 23/27 (85.19%), Query Frame = 2 Query: 8 LLKEISYLLRSGWIPCLEFELEKGWVY 88 L KE+ YLLR GWIPCLEFELE G+VY Sbjct: 81 LAKEVEYLLRKGWIPCLEFELEHGFVY 107
BLAST of BQ623442 vs. ExPASy Swiss-Prot
Match: RBS_HORVU (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 9.131e-36 Identity = 56/69 (81.16%), Postives = 64/69 (92.75%), Query Frame = 3 Query: 93 EHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 299 EH++SPGYYDGRYWTMWKLPM+GCTDATQVL EV EV+KEYP ++VRIIGFDN RQVQC+SF+A KPPG Sbjct: 99 EHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 167 HSP 2 Score: 40.0466 bits (92), Expect = 9.131e-36 Identity = 15/21 (71.43%), Postives = 19/21 (90.48%), Query Frame = 2 Query: 2 EALLKEISYLLRSGWIPCLEF 64 EALLK++ YL+RS W+PCLEF Sbjct: 70 EALLKQVDYLIRSKWVPCLEF 90
BLAST of BQ623442 vs. ExPASy Swiss-Prot
Match: RBS2_WHEAT (Ribulose bisphosphate carboxylase small chain PW9, chloroplastic OS=Triticum aestivum PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 9.131e-36 Identity = 55/69 (79.71%), Postives = 64/69 (92.75%), Query Frame = 3 Query: 93 EHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 299 EH+SSPGYYDGRYWTMWKLPM+GCTDATQVL EV EV+KEYP ++VR+IGFDN RQVQC+SF+A +PPG Sbjct: 100 EHNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNMRQVQCVSFIAFRPPG 168 HSP 2 Score: 40.4318 bits (93), Expect = 9.131e-36 Identity = 17/29 (58.62%), Postives = 24/29 (82.76%), Query Frame = 2 Query: 2 EALLKEISYLLRSGWIPCLEFELEKGWVY 88 EALLK++ YL+RS W+PCLEF + G+V+ Sbjct: 71 EALLKQVDYLIRSKWVPCLEFS-KVGFVF 98
BLAST of BQ623442 vs. ExPASy Swiss-Prot
Match: RBSC_SOLTU (Ribulose bisphosphate carboxylase small chain 2C, chloroplastic OS=Solanum tuberosum GN=RBCS-2C PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.188e-35 Identity = 52/69 (75.36%), Postives = 60/69 (86.96%), Query Frame = 3 Query: 93 EHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 299 E++ SPGYYDGRYWTMWKLPM+GCTDATQVL EV E +K YP +++RIIGFDN RQVQCISF+A KP G Sbjct: 111 ENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179 HSP 2 Score: 50.8322 bits (120), Expect = 1.188e-35 Identity = 20/29 (68.97%), Postives = 25/29 (86.21%), Query Frame = 2 Query: 2 EALLKEISYLLRSGWIPCLEFELEKGWVY 88 E LLKE+ YLL++GW+PCLEFE E G+VY Sbjct: 81 EQLLKEVEYLLKNGWVPCLEFETEHGFVY 109 The following BLAST results are available for this feature:
BLAST of BQ623442 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623442 ID=BQ623442; Name=BQ623442; organism=Citrus sinensis; type=EST; length=449bpback to top |