BQ623444
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623444 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 3.783e-23 Identity = 45/55 (81.82%), Postives = 49/55 (89.09%), Query Frame = 3 Query: 78 VKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 242 +KVKEIKNGRLAMFS FGFFVQAIVTGKGP++NLADHLADP NNA+A AT F P Sbjct: 200 LKVKEIKNGRLAMFSCFGFFVQAIVTGKGPIQNLADHLADPGTNNAFAAATKFTP 254 HSP 2 Score: 33.113 bits (74), Expect = 3.783e-23 Identity = 13/16 (81.25%), Postives = 15/16 (93.75%), Query Frame = 2 Query: 29 AFDPLGLADDPEAFAE 76 +FDPLGLADDP+ FAE Sbjct: 184 SFDPLGLADDPDTFAE 199
BLAST of BQ623444 vs. ExPASy Swiss-Prot
Match: CB2_CHLRE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.389e-22 Identity = 43/55 (78.18%), Postives = 49/55 (89.09%), Query Frame = 3 Query: 78 VKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVP 242 +KVKEIKNGRLA FSMFGFFVQAIVTGKGP++NL DHLA+P NNA+A+AT F P Sbjct: 197 LKVKEIKNGRLASFSMFGFFVQAIVTGKGPVQNLDDHLANPTVNNAFAFATKFTP 251 HSP 2 Score: 33.113 bits (74), Expect = 2.389e-22 Identity = 13/16 (81.25%), Postives = 15/16 (93.75%), Query Frame = 2 Query: 29 AFDPLGLADDPEAFAE 76 +FDPLGLADDP+ FAE Sbjct: 181 SFDPLGLADDPDTFAE 196
BLAST of BQ623444 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 8.907e-22 Identity = 43/56 (76.79%), Postives = 47/56 (83.93%), Query Frame = 3 Query: 78 VKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 245 +KVKEIKNGRLAMFS GFFVQAIVTGKGP++NL DHLADP N A+A AT F PG Sbjct: 197 LKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLADPTVNKAFASATKFTPG 252 HSP 2 Score: 32.7278 bits (73), Expect = 8.907e-22 Identity = 13/15 (86.67%), Postives = 14/15 (93.33%), Query Frame = 2 Query: 32 FDPLGLADDPEAFAE 76 FDPLGLADDP+ FAE Sbjct: 182 FDPLGLADDPDTFAE 196
BLAST of BQ623444 vs. ExPASy Swiss-Prot
Match: CB2_MALDO (Chlorophyll a-b binding protein AB10, chloroplastic OS=Malus domestica PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 6.858e-20 Identity = 43/56 (76.79%), Postives = 47/56 (83.93%), Query Frame = 3 Query: 78 VKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 245 +KVKE+KNGRLAMFSMFGFFVQAIV+ K LENLADHL VNNNA + TNFVPG Sbjct: 212 LKVKELKNGRLAMFSMFGFFVQAIVSRKDRLENLADHLGWTVNNNALSNVTNFVPG 267 HSP 2 Score: 28.1054 bits (61), Expect = 6.858e-20 Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = 2 Query: 29 AFDPLGLADDPEAFAE 76 +FD LGLA+D EAFAE Sbjct: 196 SFDSLGLAEDTEAFAE 211 HSP 3 Score: 22.3274 bits (46), Expect = 6.858e-20 Identity = 8/8 (100.00%), Postives = 8/8 (100.00%), Query Frame = 1 Query: 1 VTDPLYPG 24 VTDPLYPG Sbjct: 188 VTDPLYPG 195
BLAST of BQ623444 vs. ExPASy Swiss-Prot
Match: CB21_EUGGR (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 2.357e-14 Identity = 34/56 (60.71%), Postives = 39/56 (69.64%), Query Frame = 3 Query: 78 VKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP-VNNNAWAYATNFVP 242 +KVKEIKNGRLAM M GF+ QAIVTG+GP+EN HL DP +N A T F P Sbjct: 66 LKVKEIKNGRLAMSGMLGFYAQAIVTGEGPVENWLYHLQDPSAHNGLTALVTQFAP 121 HSP 2 Score: 30.8018 bits (68), Expect = 2.357e-14 Identity = 12/15 (80.00%), Postives = 13/15 (86.67%), Query Frame = 2 Query: 32 FDPLGLADDPEAFAE 76 FDPLGLADDP+ F E Sbjct: 51 FDPLGLADDPDTFPE 65
BLAST of BQ623444 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.535e-14 Identity = 32/45 (71.11%), Postives = 40/45 (88.89%), Query Frame = 3 Query: 78 VKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 212 +K+KEIKNGRLAM ++ G+F+QA+VTG GP +NL DHLADPVNNN Sbjct: 221 LKLKEIKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNN 265 HSP 2 Score: 22.3274 bits (46), Expect = 6.535e-14 Identity = 10/16 (62.50%), Postives = 12/16 (75.00%), Query Frame = 1 Query: 7 DPLYPGGSL*S-IGFG 51 DP YPGG L + +GFG Sbjct: 197 DPAYPGGPLFNPLGFG 212
BLAST of BQ623444 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.181e-14 Identity = 34/45 (75.56%), Postives = 40/45 (88.89%), Query Frame = 3 Query: 78 VKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 212 +KVKEIKNGRLAMF+M GFF+QA VTG+GP+ENLA HL+DP NN Sbjct: 221 LKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNN 265
BLAST of BQ623444 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.354e-12 Identity = 30/48 (62.50%), Postives = 40/48 (83.33%), Query Frame = 3 Query: 69 LLSVKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNN 212 L +K+KE+KNGRLAM ++ G+F+Q +VTG GP +NL DH+ADPVNNN Sbjct: 220 LKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHVADPVNNN 267 The following BLAST results are available for this feature:
BLAST of BQ623444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 68
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623444 ID=BQ623444; Name=BQ623444; organism=Citrus sinensis; type=EST; length=343bpback to top |