BQ623485

Overview
NameBQ623485
Unique NameBQ623485
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length574
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623485 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.011e-12
Identity = 46/116 (39.66%), Postives = 64/116 (55.17%), Query Frame = 1
Query:    1 LDVLFLNNNNFMQKLPQNLGSTPALY-LTFANNKFTGSIPRSIGKLSSTLIEVLFLNNLLTGCLPYELGFLREARVFDASNNRLTGPLPCSLGCLEKIERLNLSGNLLYGQVPEVL 345
            L VL+L NN F   +P +L +   L  L  + N  TGSIP S+G LS     +L+LN L +G +P EL +L+         N LTGP+P SL    K+  ++LS N L G++P  L
Sbjct:  429 LKVLYLQNNLFKGPIPDSLSNCSQLVSLDLSFNYLTGSIPSSLGSLSKLKDLILWLNQL-SGEIPQELMYLQALENLILDFNDLTGPIPASLSNCTKLNWISLSNNQLSGEIPASL 543          
BLAST of BQ623485 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.011e-12
Identity = 46/116 (39.66%), Postives = 64/116 (55.17%), Query Frame = 1
Query:    1 LDVLFLNNNNFMQKLPQNLGSTPALY-LTFANNKFTGSIPRSIGKLSSTLIEVLFLNNLLTGCLPYELGFLREARVFDASNNRLTGPLPCSLGCLEKIERLNLSGNLLYGQVPEVL 345
            L VL+L NN F   +P +L +   L  L  + N  TGSIP S+G LS     +L+LN L +G +P EL +L+         N LTGP+P SL    K+  ++LS N L G++P  L
Sbjct:  429 LKVLYLQNNLFKGPIPDSLSNCSQLVSLDLSFNYLTGSIPSSLGSLSKLKDLILWLNQL-SGEIPQELMYLQALENLILDFNDLTGPIPASLSNCTKLNWISLSNNQLSGEIPASL 543          
BLAST of BQ623485 vs. ExPASy Swiss-Prot
Match: Y4265_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g26540 OS=Arabidopsis thaliana GN=At4g26540 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.932e-12
Identity = 50/137 (36.50%), Postives = 70/137 (51.09%), Query Frame = 1
Query:    1 LDVLFLNNNNFMQKLPQNLGSTPALYLT-FANNKFTGSIPRSIGKL-------------SSTLIEVL----------FLNNLLTGCLPYELGFLREARVFDASNNRLTGPLPCSLGCLEKIERLNLSGNLLYGQVPE 339
            L  L L  NN + K+P  LG+ P L+L  F+ N  TG+IPRS GKL             S T+ E L            NNL+TG +P  +  LR   +F A  N+LTG +P SL    +++ ++LS N L G +P+
Sbjct:  288 LQSLLLWQNNLVGKIPTELGNCPELWLIDFSENLLTGTIPRSFGKLENLQELQLSVNQISGTIPEELTNCTKLTHLEIDNNLITGEIPSLMSNLRSLTMFFAWQNKLTGNIPQSLSQCRELQAIDLSYNSLSGSIPK 424          
BLAST of BQ623485 vs. ExPASy Swiss-Prot
Match: Y3804_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 OS=Arabidopsis thaliana GN=At3g28040 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.136e-12
Identity = 47/116 (40.52%), Postives = 64/116 (55.17%), Query Frame = 1
Query:    1 LDVLFLNNNNFMQKLPQNLGSTPALY-LTFANNKFTGSIPRSIGKLSSTLIEVLFLNNLLTGCLPYELGFLREARVFDASNNRLTGPLPCSLGCLEKIERLNLSGNLLYGQVPEVL 345
            L  L L  N F   LP ++G  P L  +  ++N F+G +PR++ KL S L      NNLL+G  P  +G +      D S+N LTG LP S+  L  ++ LNLS N L G+VPE L
Sbjct:  249 LKELQLQRNQFSGALPSDIGLCPHLNRVDLSSNHFSGELPRTLQKLKS-LNHFDVSNNLLSGDFPPWIGDMTGLVHLDFSSNELTGKLPSSISNLRSLKDLNLSENKLSGEVPESL 363          
BLAST of BQ623485 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.707e-12
Identity = 43/111 (38.74%), Postives = 61/111 (54.95%), Query Frame = 1
Query:   10 LFLNNNNFMQKLPQNLGSTPALYLTFA-NNKFTGSIPRSIGKLSSTLIEVLFL-NNLLTGCLPYELGFLREARVFDASNNRLTGPLPCSLGCLEKIERLNLSGNLLYGQVP 336
            L L  +     LP  LG    L L    NN    SIP S+G  + T +E ++L NN +TG +P E+G L   +  D SNN L G +P SLG L+++ + N+S N L G++P
Sbjct:   78 LSLTYHKLRGPLPPELGKLDQLRLLMLHNNALYQSIPASLG--NCTALEGIYLQNNYITGTIPSEIGNLSGLKNLDLSNNNLNGAIPASLGQLKRLTKFNVSNNFLVGKIP 186          
BLAST of BQ623485 vs. ExPASy Swiss-Prot
Match: Y3475_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.760e-12
Identity = 42/115 (36.52%), Postives = 64/115 (55.65%), Query Frame = 1
Query:    1 LDVLFLNNNNFMQKLPQNLGS-TPALYLTFANNKFTGSIPRSIGKLSSTLIEVLFLNNLLTGCLPYELGFLREARVFDASNNRLTGPLPCSLGCLEKIERLNLSGNLLYGQVPEV 342
            L+ L L+NN F   +P +LG+ +  L L   +NK  G+IP  I K+   L+ +    N L G LP ++G L+        +N+L+G LP +LG    +E L L GNL YG +P++
Sbjct:  435 LETLDLSNNGFEGIVPTSLGNCSHLLELWIGDNKLNGTIPLEIMKIQQ-LLRLDMSGNSLIGSLPQDIGALQNLGTLSLGDNKLSGKLPQTLGNCLTMESLFLEGNLFYGDIPDL 548          
BLAST of BQ623485 vs. ExPASy Swiss-Prot
Match: HSL2_ARATH (LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana GN=HSL2 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.760e-12
Identity = 47/134 (35.07%), Postives = 68/134 (50.75%), Query Frame = 1
Query:   10 LFLNNNNFMQKLPQNLGSTPALY-LTFANNKFTGSIPRSIGKLSSTLIEVLFLNNLLTGCLPYELGFLREARVFDASNNRLTGPLPCSLGCLEKIERLNLSGNLLYGQVPEVLCAXXXXXXXXXXXXYFTGVGP 408
            L L ++N + ++P ++ +   L  L  A N  TG IP SIG+L S + ++   +N L+G LP  +G L E R FD S N LTG LP  +  L+ I   NL+ N   G +P+V+               FTG  P
Sbjct:  225 LRLTHSNLVGEIPDSIMNLVLLENLDLAMNSLTGEIPESIGRLES-VYQIELYDNRLSGKLPESIGNLTELRNFDVSQNNLTGELPEKIAALQLIS-FNLNDNFFTGGLPDVVALNPNLVEFKIFNNSFTGTLP 356          

HSP 2 Score: 66.6254 bits (161), Expect = 9.685e-11
Identity = 36/108 (33.33%), Postives = 55/108 (50.93%), Query Frame = 1
Query:   16 LNNNNFMQKLPQNLGSTPALYLTFANNKFTGSIPRSIGKLSSTLIEVLFLNNLLTGCLPYELGFLREARVFDASNNRLTGPLPCSLGCLEKIERLNLSGNLLYGQVPE 339
            ++ NN   +LP+ + +   +     +N FTG +P  +  L+  L+E    NN  TG LP  LG   E   FD S NR +G LP  L    K++++    N L G++PE
Sbjct:  299 VSQNNLTGELPEKIAALQLISFNLNDNFFTGGLPDVVA-LNPNLVEFKIFNNSFTGTLPRNLGKFSEISEFDVSTNRFSGELPPYLCYRRKLQKIITFSNQLSGEIPE 405          
BLAST of BQ623485 vs. ExPASy Swiss-Prot
Match: Y5694_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 OS=Arabidopsis thaliana GN=At5g06940 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.144e-11
Identity = 41/115 (35.65%), Postives = 65/115 (56.52%), Query Frame = 1
Query:    1 LDVLFLNNNNFMQKLPQNLGSTPALYLTFA-NNKFTGSIPRSIGKLSSTLIEVLFLNNLLTGCLPYELGFLREARVFDASNNRLTGPLPCSLGCLEKIERLNLSGNLLYGQVPEV 342
            L+ L + NN F  + P  L   P + +  A NN+FTG +P S+  L+S L +V  +NN  +G +P+ LG ++    F AS NR +G LP +      +  +N+S N L G++PE+
Sbjct:  319 LERLQVQNNGFSGEFPVVLWKLPRIKIIRADNNRFTGQVPESVS-LASALEQVEIVNNSFSGEIPHGLGLVKSLYKFSASQNRFSGELPPNFCDSPVLSIVNISHNRLLGKIPEL 432          
BLAST of BQ623485 vs. ExPASy Swiss-Prot
Match: Y2317_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.494e-11
Identity = 41/113 (36.28%), Postives = 64/113 (56.64%), Query Frame = 1
Query:    1 LDVLFLNNNNFMQKLPQNLGSTPALY-LTFANNKFTGSIPRSIGKLSSTLIEVLFLNNLLTGCLPYELGFLREARVFDASNNRLTGPLPCSLGCLEKIERLNLSGNLLYGQVP 336
            L+ L L  N+ +  +P  +G+  +L  L    N+  G+IP+ +GKLS  + E+ F  NLL+G +P EL  + E R+     N+LTG +P  L  L  + +L+LS N L G +P
Sbjct:  279 LETLALYGNSLVGPIPSEIGNMKSLKKLYLYQNQLNGTIPKELGKLSKVM-EIDFSENLLSGEIPVELSKISELRLLYLFQNKLTGIIPNELSKLRNLAKLDLSINSLTGPIP 390          

HSP 2 Score: 68.1662 bits (165), Expect = 3.329e-11
Identity = 45/116 (38.79%), Postives = 61/116 (52.59%), Query Frame = 1
Query:    1 LDVLFLNNNNFMQKLPQNLGSTPALYLTFANNKFTGSIPRSIGKLSSTLIEVLFLNN-LLTGCLPYELGFLREARVFDASNNRLTGPLPCSLGCLEKIERLNLSGNLLYGQVPEVL 345
            LD+  +N +  +   P   G    +YL  A N  TG IPR IG  S   +EV+FLNN    G +P E+  L + R F+  NN+L+GPLP  +G L  +E L    N L G +P  L
Sbjct:   90 LDLSSMNLSGIVS--PSIGGLVNLVYLNLAYNALTGDIPREIGNCSK--LEVMFLNNNQFGGSIPVEINKLSQLRSFNICNNKLSGPLPEEIGDLYNLEELVAYTNNLTGPLPRSL 201          
BLAST of BQ623485 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.494e-11
Identity = 42/108 (38.89%), Postives = 61/108 (56.48%), Query Frame = 1
Query:   16 LNNNNFMQKLPQNLGSTPAL-YLTFANNKFTGSIPRSIGKLSSTLIEVLFLNNLLTGCLPYELGFLREARVFDASNNRLTGPLPCSLGCLEKIERLNLSGNLLYGQVP 336
            L N N   +L   LG  P L YL   +N  TG+IP  +G L+  +   L+LNN L+G +P  LG L++ R    +NN L+G +P SL  +  ++ L+LS N L G +P
Sbjct:   75 LGNANLSGQLVMQLGQLPNLQYLELYSNNITGTIPEQLGNLTELVSLDLYLNN-LSGPIPSTLGRLKKLRFLRLNNNSLSGEIPRSLTAVLTLQVLDLSNNPLTGDIP 181          
The following BLAST results are available for this feature:
BLAST of BQ623485 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
BRI1_SOLPE3.011e-1239.66Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]
BRI1_SOLLC3.011e-1239.66Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]
Y4265_ARATH3.932e-1236.50Probable LRR receptor-like serine/threonine-protei... [more]
Y3804_ARATH5.136e-1240.52Probably inactive leucine-rich repeat receptor-lik... [more]
FEI2_ARATH6.707e-1238.74LRR receptor-like serine/threonine-protein kinase ... [more]
Y3475_ARATH8.760e-1236.52Probable LRR receptor-like serine/threonine-protei... [more]
HSL2_ARATH8.760e-1235.07LRR receptor-like serine/threonine-protein kinase ... [more]
Y5694_ARATH1.144e-1135.65Probably inactive leucine-rich repeat receptor-lik... [more]
Y2317_ARATH1.494e-1136.28Probable leucine-rich repeat receptor-like protein... [more]
BAK1_ARATH1.494e-1138.89BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00576 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00576 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623485 ID=BQ623485; Name=BQ623485; organism=Citrus sinensis; type=EST; length=574bp
CTAGACGTACTCTTTCTTAACAACAACAATTTCATGCAGAAACTCCCTCA
AAATCTCGGTTCCACACCAGCGCTATATCTCACTTTCGCCAACAATAAAT
TCACCGGTTCAATCCCGAGAAGCATTGGCAAACTTTCCTCCACATTAATC
GAAGTCTTGTTCTTGAATAATTTGCTCACAGGCTGTCTCCCTTATGAGCT
GGGGTTTCTGCGAGAAGCTAGGGTTTTTGATGCAAGTAACAACCGGTTGA
CAGGCCCACTGCCGTGCTCGTTAGGGTGCTTGGAAAAGATCGAACGGCTG
AACCTCTCTGGAAACTTACTGTACGGACAGGTACCGGAAGTGTTATGCGC
GTTGGATAATTTGGTGAATTTATCATTGTCGAATAATTATTTCACTGGAG
TAGGGCCTTTGTGTAGGAAGCTGATCAAGAATGGGGTTCTTGATGTCAAT
AGAAATTGCATCCATTATCTTCCTGACCAGAGATCGACGCATGAGTGCGC
TCTATTCTTCTTGCAGCCTCGGTTTTGCTTCTATCCTTCATGGGATAATT
TTATTCCTTGCAGTAAGGTCTCTT
back to top