BQ623489

Overview
NameBQ623489
Unique NameBQ623489
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length525
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y5332_ARATH (Probable inactive receptor kinase At5g53320 OS=Arabidopsis thaliana GN=At5g53320 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.397e-15
Identity = 49/170 (28.82%), Postives = 82/170 (48.24%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRE-LGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            L+W TR  +  G ARG+ ++H Q   K++H ++K++N+ L+      +   G+A L+     H        VG+ APE   T + ++ +DV+ FGIL+ E++TG          ++   ++ W              D E L       E+ E+LQV ++CT  LP  RP
Sbjct:  404 LEWETRLNMVYGTARGVAHIHSQSGGKLVHGNIKSSNIFLNGKGYGCISGTGMATLMHSLPRH-------AVGYRAPEITDTRKGTQPSDVYSFGILIFEVLTGK---------SEVANLVRWVNSVVREEWTGEVFDEELLRCTQVEEEMVEMLQVGMVCTARLPEKRP 557          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: FLS2_ARATH (LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana GN=FLS2 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.397e-15
Identity = 55/171 (32.16%), Postives = 84/171 (49.12%), Query Frame = 2
Query:   29 IAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLL----DHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAM--LEWXXXXXXXXXXXXXXDRELGSNYDRIE----VGEILQVALLCTQYLPVHRP 511
            + +  A G+ YLH      I+H D+K AN+LLD    A V DFG A++L    D S +  T+A  GT+G++APE+    + + K DVF FGI+++EL+T  R        +Q   +  L                D ELG +   ++    + + L++ L CT   P  RP
Sbjct:  974 LCVHIASGIDYLHSGYGFPIVHCDLKPANILLDSDRVAHVSDFGTARILGFREDGSTTASTSAFEGTIGYLAPEFAYMRKVTTKADVFSFGIIMMELMTKQRPTSLNDEDSQDMTLRQLVEKSIGNGRKGMVRVLDMELGDSIVSLKQEEAIEDFLKLCLFCTSSRPEDRP 1144          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: DRKD_DICDI (Probable serine/threonine-protein kinase drkD OS=Dictyostelium discoideum GN=drkD PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.397e-15
Identity = 43/103 (41.75%), Postives = 63/103 (61.17%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 313
            +DW  R ++    ARG+ YLH + +P IIHRD+K  N+L+DD  +  V DFGLA +  H+       + GT G +APE L+    +EK DV+ + I+L EL+T
Sbjct:  944 MDWGLRLQLGFDCARGMTYLHSR-NPIIIHRDLKTDNLLVDDSWQVKVADFGLATVKSHT---FAKTMCGTTGWVAPEVLAEEGYTEKADVYSYAIVLWELLT 1042          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y5516_ARATH (Probable receptor kinase At5g05160 OS=Arabidopsis thaliana GN=At5g05160 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.384e-15
Identity = 53/175 (30.29%), Postives = 90/175 (51.43%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLE---WXXXXXXXXXXXXXXDRELGSNYDRI--EVGEILQVALLCTQYLPVHRPK 514
            +DW TR +IA G ++ + YLH     K +H D+K++N+LL +  E  + D  L  L +     + T    T+G+ APE + T + S+++DV+ FG+++LE++TG   L     +  +  +++   W              D EL   +  I  E+ ++LQ+AL C    P  RPK
Sbjct:  441 VDWETRMKIATGTSKAISYLHSL---KFVHGDIKSSNILLTEDLEPCLSDTSLVTLFN-----LPTHTPRTIGYNAPEVIETRRVSQRSDVYSFGVVILEMLTGKTPLT-QPGLEDERVVIDLPRWVRSVVREEWTAEVFDVEL-LKFQNIEEEMVQMLQLALACVARNPESRPK 605          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: PUB35_ARATH (U-box domain-containing protein 35 OS=Arabidopsis thaliana GN=PUB35 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 4.066e-15
Identity = 60/175 (34.29%), Postives = 90/175 (51.43%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKL--LDHSDSHVT----TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELGSNYDRIEVGEILQVALLCTQYLPVHRP 511
            L W  R RIA   A  L++LH+     IIHRD+K AN+LLD    + VGD GL+ +  +D   +  T    T+  GT+ +I PEY  TG+ S K+D++ FG++LL+L+T   A+     +  + AM                 D++ G N+   E  E+  +AL CT+     RP
Sbjct:  571 LPWFERFRIAWEVAAALVFLHKSKPKPIIHRDLKPANILLDHNFVSKVGDVGLSTMVQVDPLSTKFTIYKQTSPVGTLCYIDPEYQRTGRISSKSDIYSFGMILLQLLTAKPAIALTHFV--ESAM-------DSNDEFLKILDQKAG-NWPIEETRELAALALCCTELRGKDRP 735          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: CCR12_ARATH (Serine/threonine-protein kinase-like protein At1g28390 OS=Arabidopsis thaliana GN=At1g28390 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.066e-15
Identity = 45/112 (40.18%), Postives = 68/112 (60.71%), Query Frame = 2
Query:   11 WNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVT-TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKS 343
            WN R + A+  A  +  LH   + ++IHRD+K+ NVL+D    A + DFGLA + +  D  +  T   GT+G++ P YL+    + K+DVF FGILLLE+I+G  A++   S
Sbjct:  158 WNRRIKHALQIAIAVHALHT-AETQVIHRDIKSCNVLIDGDGNARLADFGLALIGNVDDERLKYTPPAGTLGYLDPSYLAPADLTAKSDVFSFGILLLEIISGREAIDLNYS 268          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: DRKC_DICDI (Probable serine/threonine-protein kinase drkC OS=Dictyostelium discoideum GN=drkC PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 6.935e-15
Identity = 43/105 (40.95%), Postives = 61/105 (58.10%), Query Frame = 2
Query:    2 ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLA-KLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 313
            +LDW   K +A+  A+G+ YLH  CDP +IHRD+K+ N+L+D+     + DFGL+ +   H D        GT    APE L     +EK DVF F I+L E++T
Sbjct:  584 SLDWPRMKSMALDIAKGMNYLH-CCDPIVIHRDLKSHNLLVDEHYRVKISDFGLSTRFKKHLDKKTAMTPVGTPCWTAPEVLRNDPYTEKADVFSFAIVLWEIVT 687          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: RLK_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RLK OS=Arabidopsis thaliana GN=RLK PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.183e-14
Identity = 50/166 (30.12%), Postives = 89/166 (53.61%), Query Frame = 2
Query:    2 ALDWNTRKRIAIGAARGLLYLHEQCDPKII--HRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXDRELG-SNYDRIEVGEILQVALLCTQ 490
            +LDW TR +I  G A+GL YLH+   P ++  H  +K++NVLL    E ++ D+GL  L++   + +  A      + +PEYL   + ++KTDV+G GIL+LE++TG     F +S  +   +  W              D+ +G +++   ++ ++L + L C +
Sbjct:  452 SLDWPTRLKIVKGVAKGLFYLHQDL-PSLMAPHGHLKSSNVLLTKTFEPLLTDYGLIPLINQEKAQMHMAA-----YRSPEYLQHRRITKKTDVWGLGILILEILTGKFPANFSQSSEED--LASWVNSGFHGVWAPSLFDKGMGKTSHCEGQILKLLTIGLNCCE 609          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: KPEL_DROME (Serine/threonine-protein kinase pelle OS=Drosophila melanogaster GN=pll PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.018e-14
Identity = 44/112 (39.29%), Postives = 63/112 (56.25%), Query Frame = 2
Query:    2 ALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHV--TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALE 331
            AL W  R  I++G ARG+ +LH      +IH D+K AN+LLD   +  +GDFGL +    S   V     V GT  ++ PE+ +  Q S   DV+ FGI+LLE+ TG +  +
Sbjct:  314 ALTWQQRFSISLGTARGIYFLHTARGTPLIHGDIKPANILLDQCLQPKIGDFGLVREGPKSLDAVVEVNKVFGTKIYLPPEFRNFRQLSTGVDVYSFGIVLLEVFTGRQVTD 425          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: ACCR2_ARATH (Serine/threonine-protein kinase-like protein CCR2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.018e-14
Identity = 43/109 (39.45%), Postives = 61/109 (55.96%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALE 331
            LDW+ R +I + AARGL YLH + DP IIHRDVK +N+LLD    A + DFGL    +   S+                     S  + DV+ FGI+LLE+++G +A++
Sbjct:  613 LDWSMRLKIMLQAARGLDYLHNEVDPPIIHRDVKTSNILLDGEMCARIADFGLVSSNERDSSN---------------------SDREGDVYDFGIVLLEILSGRKAID 700          
The following BLAST results are available for this feature:
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
Y5332_ARATH1.397e-1528.82Probable inactive receptor kinase At5g53320 OS=Ara... [more]
FLS2_ARATH1.397e-1532.16LRR receptor-like serine/threonine-protein kinase ... [more]
DRKD_DICDI1.397e-1541.75Probable serine/threonine-protein kinase drkD OS=D... [more]
Y5516_ARATH2.384e-1530.29Probable receptor kinase At5g05160 OS=Arabidopsis ... [more]
PUB35_ARATH4.066e-1534.29U-box domain-containing protein 35 OS=Arabidopsis ... [more]
CCR12_ARATH4.066e-1540.18Serine/threonine-protein kinase-like protein At1g2... [more]
DRKC_DICDI6.935e-1540.95Probable serine/threonine-protein kinase drkC OS=D... [more]
RLK_ARATH1.183e-1430.12Probable LRR receptor-like serine/threonine-protei... [more]
KPEL_DROME2.018e-1439.29Serine/threonine-protein kinase pelle OS=Drosophil... [more]
ACCR2_ARATH2.018e-1439.45Serine/threonine-protein kinase-like protein CCR2 ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00580 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00580 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623489 ID=BQ623489; Name=BQ623489; organism=Citrus sinensis; type=EST; length=525bp
GGCATTAGATTGGAACACTAGGAAGAGGATAGCAATTGGAGCTGCAAGGG
GTCTGTTATACCTACATGAGCAATGTGATCCAAAGATAATCCACAGAGAT
GTGAAGGCTGCTAATGTGCTTCTGGATGACTTCTGTGAGGCTATAGTTGG
TGACTTTGGCCTTGCAAAGCTTCTTGATCACTCCGACTCTCATGTGACTA
CTGCTGTCCGCGGTACTGTTGGTCATATAGCGCCTGAGTATCTCTCCACT
GGCCAGTCATCTGAGAAAACTGACGTGTTTGGATTTGGCATTCTCTTGTT
GGAGCTCATTACTGGAATGAGAGCTCTTGAGTTTGGCAAGTCTATTAATC
AGAAAGGAGCCATGCTTGAGTGGGTGAAGAAAATTCAGCAGGAAAAGAAA
GTAGAAGTGTTGGTGGACCGAGAGCTTGGAAGCAACTATGACCGGATTGA
GGTTGGAGAGATTCTTCAAGTGGCTTTGCTATGCACTCAATACCTTCCAG
TCCACCGCCCCAAATGTCCGAAGTG
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