BQ623489

Overview
NameBQ623489
Unique NameBQ623489
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length525
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: SHKC_DICDI (Dual specificity protein kinase shkC OS=Dictyostelium discoideum GN=shkC PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.088e-11
Identity = 37/99 (37.37%), Postives = 63/99 (63.64%), Query Frame = 2
Query:   20 RKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLD-HSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 313
            R R+A  AA G+ +LHE  +P  +HRD+K++N+L+D+     + DFGL+ L   H      ++ +GT  ++APE +   + +E +DV+ FGI+L E++T
Sbjct:  122 RMRMARDAALGINWLHES-NPVFVHRDIKSSNLLVDENMRVKICDFGLSALKQKHKMLKDQSSAKGTPLYMAPEVMMFKEFNESSDVYSFGIVLWEILT 219          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: PKN6_MYXXA (Serine/threonine-protein kinase pkn6 OS=Myxococcus xanthus GN=pkn6 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.727e-11
Identity = 39/120 (32.50%), Postives = 60/120 (50.00%), Query Frame = 2
Query:   26 RIAIGAARGLLYLHEQCDPK------IIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSINQKGAML 367
            ++   AA GL Y HE  D +      +IHRDV   N+L+       V DFG+AK+       +T  V+G V ++ PE L       + DV+  G++L EL+TG R  +    ++   A+L
Sbjct:  113 KVVAAAAEGLAYAHEFRDVETGEPLGLIHRDVSPDNILVSRQGAVKVVDFGIAKVAGQGHRTLTGVVKGKVAYMPPEQLQAKAMDRRVDVYALGVVLYELLTGKRPFDATTDVSVMQAIL 232          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y9955_DICDI (Probable serine/threonine-protein kinase DDB_G0267514 OS=Dictyostelium discoideum GN=DDB_G0267514 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.562e-11
Identity = 42/98 (42.86%), Postives = 59/98 (60.20%), Query Frame = 2
Query:   23 KRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 316
            K++AI  A+G+ YLH      +IHRD+K+ N+LLD+     + DFGL+KL   S S   T   G+   ++PE L     +EK DV+ FGI+L EL TG
Sbjct:  762 KKLAIQIAQGMNYLHLS---GVIHRDIKSLNLLLDEHMNVKICDFGLSKL--KSKSTEMTKSIGSPIWMSPELLMGEDYTEKVDVYAFGIILWELGTG 854          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: IRAK3_MOUSE (Interleukin-1 receptor-associated kinase 3 OS=Mus musculus GN=Irak3 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 3.562e-11
Identity = 40/128 (31.25%), Postives = 70/128 (54.69%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDH-----SDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMR-ALEFGKSINQKGAMLE 370
            L W+ R  + IG A+ + YLH      +I  +V +AN+LLDD  +  + DF  A    +     S  ++T   R  + ++  EY+  G+ S KTDV+ FGI+++E++TG +  L+  K +  +  ++E
Sbjct:  275 LSWHVRISVLIGIAKAIQYLHNTQPCAVICGNVSSANILLDDQLQPKLTDFAAAHFRPNLEQQSSTINMTGGGRKHLWYMPEEYIRQGRLSVKTDVYSFGIVIMEVLTGCKVVLDDPKHVQLRDLLME 402          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: LCK_RAT (Proto-oncogene tyrosine-protein kinase LCK OS=Rattus norvegicus GN=Lck PE=2 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 4.652e-11
Identity = 36/103 (34.95%), Postives = 60/103 (58.25%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 313
            L+ N    +A   A G+ ++ EQ     IHRD++AAN+L+ D     + DFGLA+L++ ++       +  +   APE ++ G  + K+DV+ FGILL E++T
Sbjct:  336 LNVNKLLDMAAQIAEGMAFIEEQ---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 435          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: LCK_MOUSE (Proto-oncogene tyrosine-protein kinase LCK OS=Mus musculus GN=Lck PE=1 SV=4)

HSP 1 Score: 67.3958 bits (163), Expect = 4.652e-11
Identity = 36/103 (34.95%), Postives = 60/103 (58.25%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 313
            L+ N    +A   A G+ ++ EQ     IHRD++AAN+L+ D     + DFGLA+L++ ++       +  +   APE ++ G  + K+DV+ FGILL E++T
Sbjct:  336 LNVNKLLDMAAQIAEGMAFIEEQ---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 435          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: IRAK3_HUMAN (Interleukin-1 receptor-associated kinase 3 OS=Homo sapiens GN=IRAK3 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.652e-11
Identity = 36/113 (31.86%), Postives = 64/113 (56.64%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDS-----HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRAL 328
            L W+ R  I IG ++ + YLH      +I   + +AN+LLDD  +  + DF +A    H +      ++T++    + ++  EY+  G+ S KTDV+ FGI+++E++TG R +
Sbjct:  262 LPWHIRIGILIGISKAIHYLHNVQPCSVICGSISSANILLDDQFQPKLTDFAMAHFRSHLEHQSCTINMTSSSSKHLWYMPEEYIRQGKLSIKTDVYSFGIVIMEVLTGCRVV 374          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: Y4294_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20940 OS=Arabidopsis thaliana GN=At4g20940 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.075e-11
Identity = 52/168 (30.95%), Postives = 84/168 (50.00%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDF-CEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQS--SEKTDVFGFGILLLELITGMRALEFGKSINQKGAMLEWXXXXXXXXXXXXXXD----RELGSN-YDRIEVGEILQVALLC 484
            L W  R +IA+  ARGL YLH   D  + H ++KA N+LLD     A V D+ L +L+  + +       G +G+ APE  ++ +   S K+DV+ FG++LLE++TG  A +      +   + +W              D    +E+GS+      + E+L +AL C
Sbjct:  852 LAWTQRLKIAVDVARGLNYLH--FDRAVPHGNLKATNILLDGAELNARVADYCLHRLMTQAGTVEQILDAGILGYRAPELAASRKPLPSFKSDVYAFGVILLEILTGRCAGDVITGEQEGVDLTDWVRLRVAEGRGAECFDSVLTQEMGSDPVTEKGMKEVLGIALRC 1017          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: M3K12_RAT (Mitogen-activated protein kinase kinase kinase 12 OS=Rattus norvegicus GN=Map3k12 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.075e-11
Identity = 41/104 (39.42%), Postives = 59/104 (56.73%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 316
            +DW+      +G A G+ YLH     KIIHRD+K+ N+L+       + DFG +K L  SD     +  GTV  +APE +     SEK D++ FG++L EL+TG
Sbjct:  247 VDWS------MGIAGGMNYLHLH---KIIHRDLKSPNMLITYDDVVKISDFGTSKEL--SDKSTKMSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTG 339          
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Match: M3K12_MOUSE (Mitogen-activated protein kinase kinase kinase 12 OS=Mus musculus GN=Map3k12 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.075e-11
Identity = 41/104 (39.42%), Postives = 59/104 (56.73%), Query Frame = 2
Query:    5 LDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDFCEAIVGDFGLAKLLDHSDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 316
            +DW+      +G A G+ YLH     KIIHRD+K+ N+L+       + DFG +K L  SD     +  GTV  +APE +     SEK D++ FG++L EL+TG
Sbjct:  247 VDWS------MGIAGGMNYLHLH---KIIHRDLKSPNMLITYDDVVKISDFGTSKEL--SDKSTKMSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTG 339          
The following BLAST results are available for this feature:
BLAST of BQ623489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
SHKC_DICDI2.088e-1137.37Dual specificity protein kinase shkC OS=Dictyostel... [more]
PKN6_MYXXA2.727e-1132.50Serine/threonine-protein kinase pkn6 OS=Myxococcus... [more]
Y9955_DICDI3.562e-1142.86Probable serine/threonine-protein kinase DDB_G0267... [more]
IRAK3_MOUSE3.562e-1131.25Interleukin-1 receptor-associated kinase 3 OS=Mus ... [more]
LCK_RAT4.652e-1134.95Proto-oncogene tyrosine-protein kinase LCK OS=Ratt... [more]
LCK_MOUSE4.652e-1134.95Proto-oncogene tyrosine-protein kinase LCK OS=Mus ... [more]
IRAK3_HUMAN4.652e-1131.86Interleukin-1 receptor-associated kinase 3 OS=Homo... [more]
Y4294_ARATH6.075e-1130.95Probable LRR receptor-like serine/threonine-protei... [more]
M3K12_RAT6.075e-1139.42Mitogen-activated protein kinase kinase kinase 12 ... [more]
M3K12_MOUSE6.075e-1139.42Mitogen-activated protein kinase kinase kinase 12 ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00580 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00580 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623489 ID=BQ623489; Name=BQ623489; organism=Citrus sinensis; type=EST; length=525bp
GGCATTAGATTGGAACACTAGGAAGAGGATAGCAATTGGAGCTGCAAGGG
GTCTGTTATACCTACATGAGCAATGTGATCCAAAGATAATCCACAGAGAT
GTGAAGGCTGCTAATGTGCTTCTGGATGACTTCTGTGAGGCTATAGTTGG
TGACTTTGGCCTTGCAAAGCTTCTTGATCACTCCGACTCTCATGTGACTA
CTGCTGTCCGCGGTACTGTTGGTCATATAGCGCCTGAGTATCTCTCCACT
GGCCAGTCATCTGAGAAAACTGACGTGTTTGGATTTGGCATTCTCTTGTT
GGAGCTCATTACTGGAATGAGAGCTCTTGAGTTTGGCAAGTCTATTAATC
AGAAAGGAGCCATGCTTGAGTGGGTGAAGAAAATTCAGCAGGAAAAGAAA
GTAGAAGTGTTGGTGGACCGAGAGCTTGGAAGCAACTATGACCGGATTGA
GGTTGGAGAGATTCTTCAAGTGGCTTTGCTATGCACTCAATACCTTCCAG
TCCACCGCCCCAAATGTCCGAAGTG
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