BQ623505

Overview
NameBQ623505
Unique NameBQ623505
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length523
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: OXO2_HORVU (Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.915e-25
Identity = 56/110 (50.91%), Postives = 73/110 (66.36%), Query Frame = 3
Query:   15 RLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIV---TTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV 335
            R+D   GG NPPH HPR TE GIV +G LLVGI+    + N  +S+V+  G+ FLIPR L+HFQ NVG   A+ +  FN+QNPG+     T+F + PP+P  VLTK+ RV
Sbjct:   99 RVDFAPGGTNPPHVHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLTKALRV 208          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GER2_WHEAT (Oxalate oxidase GF-2.8 OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.502e-25
Identity = 56/110 (50.91%), Postives = 73/110 (66.36%), Query Frame = 3
Query:   15 RLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIV---TTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV 335
            R+D   GG NPPH HPR TE GIV +G LLVGI+    + N  +S+V+  G+ FLIPR L+HFQ NVG   A+ +  FN+QNPG+     T+F + PP+P  VLTK+ RV
Sbjct:   99 RVDFAPGGTNPPHIHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLTKALRV 208          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: NEC1_NICLS (Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana sanderae GN=NECI PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 9.506e-25
Identity = 55/112 (49.11%), Postives = 71/112 (63.39%), Query Frame = 3
Query:    9 LFRLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRVGDD 344
            L R+D   GGINPPHTHPR +E   V  G L VG +TT N   SK +  G+VF+ PR LVHFQ N G  PA  I  FN+Q PG      T+F A+PPVP++VL ++F++  +
Sbjct:  103 LARIDYAPGGINPPHTHPRASEMVFVMEGELDVGFITTANVLVSKKIIKGEVFVFPRGLVHFQKNNGEVPAAVISAFNSQLPGTQSIPITLFGASPPVPDDVLAQTFQINTE 214          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL111_ARATH (Germin-like protein subfamily 1 member 11 OS=Arabidopsis thaliana GN=At5g38940 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.242e-24
Identity = 56/115 (48.70%), Postives = 71/115 (61.74%), Query Frame = 3
Query:    9 LFRLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTTN--NTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRVGDDV 347
            L R+D  V G NPPHTHPR TE  +V +GTLLVG VT+N  N  FSKVL  G VF+ P  L+HFQ N+G  PA      ++QNPGV     T+F A P +   +L K+F++   V
Sbjct:   99 LVRIDYAVNGQNPPHTHPRATEILVVEQGTLLVGFVTSNPDNRLFSKVLNEGDVFVFPEGLIHFQANIGKAPAVAFAALSSQNPGVITIANTVFGANPAINPTILAKAFQLNPRV 213          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GER3_WHEAT (Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.118e-24
Identity = 55/110 (50.00%), Postives = 72/110 (65.45%), Query Frame = 3
Query:   15 RLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIV---TTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV 335
            R+D   GG NPPH HPR TE GIV +G LLVGI+    + N  +S+V+  G+ FLIPR L+HFQ NVG   A+ +  FN+Q+P V     T+F + PP+P  VLTK+ RV
Sbjct:   99 RVDFAPGGTNPPHIHPRATEIGIVMKGELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVFFNSQSPSVVFVPLTLFGSNPPIPKPVLTKALRV 208          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL41_ORYSJ (Germin-like protein 4-1 OS=Oryza sativa subsp. japonica GN=Os04g0617900 PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 2.766e-24
Identity = 56/115 (48.70%), Postives = 73/115 (63.48%), Query Frame = 3
Query:   15 RLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTTN-----NTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRVGDD 344
            R+D    G NPPHTHPR TE   V +GTLLVG VT+N     N  F+K+L PG VF+ P+ L+HFQLN G  PA  I   ++QNPGV      +F +TPP+ ++VL K+F +  D
Sbjct:  103 RIDFAPNGQNPPHTHPRATEILTVLQGTLLVGFVTSNQPGGGNLQFTKLLGPGDVFVFPQGLIHFQLNNGAVPAVAIAALSSQNPGVITIANAVFGSTPPILDDVLAKAFMIDKD 217          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: OXO1_HORVU (Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 3.612e-24
Identity = 54/110 (49.09%), Postives = 72/110 (65.45%), Query Frame = 3
Query:   15 RLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIV---TTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV 335
            R+D   GG NPPH HPR TE G+V +G LLVGI+    + N  +S+V+  G+ F+IPR L+HFQ NVG   A  +  FN+QNPG+     T+F + PP+P  VLTK+ RV
Sbjct:   76 RVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQNPGIVFVPLTLFGSDPPIPTPVLTKALRV 185          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: NEC1_NICPL (Nectarin-1 OS=Nicotiana plumbaginifolia GN=NEC1 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 3.612e-24
Identity = 54/109 (49.54%), Postives = 70/109 (64.22%), Query Frame = 3
Query:    9 LFRLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV 335
            L R+D   GGINPPHTHPR +E   V  G L VG +TT N   SK +T G+VF+ PR LVHFQ N G  PA  +  FN+Q PG      T+F A+P VP++VL ++F++
Sbjct:  103 LARIDYAPGGINPPHTHPRASEMVFVMEGELDVGFITTANVLVSKQITKGEVFVFPRGLVHFQKNNGKIPAAVVSAFNSQLPGTQSIPITLFGASPTVPDDVLAQTFQI 211          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL32_ORYSJ (Putative germin-like protein 3-2 OS=Oryza sativa subsp. japonica GN=Os03g0651800 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 4.718e-24
Identity = 52/107 (48.60%), Postives = 69/107 (64.49%), Query Frame = 3
Query:   15 RLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV 335
            R+D    G++PPHTHPR TE   V  GTL VG VTT N  F++ ++ G+VF+ PR LVHFQ N GN  A  I  FN+Q PG      T+F A PP+P++ L ++F+V
Sbjct:  100 RIDYAPWGLSPPHTHPRATEIMFVAEGTLDVGFVTTANKLFTRTVSKGEVFVFPRGLVHFQRNSGNTSALAIAAFNSQLPGTQSIADTLFGAAPPLPSDTLARAFQV 206          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL24_ARATH (Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana GN=GLP10 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 4.718e-24
Identity = 53/111 (47.75%), Postives = 71/111 (63.96%), Query Frame = 3
Query:    9 LFRLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGN-EPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRVG 338
            L R+D   GG+NPPHTHPR TE   V  G L VG +TT N  F+K +  G+VF+ PR L+H+Q N    +PA+ I  FN+Q PG      T+F ATP +P+ VLT +F++G
Sbjct:   94 LARIDYAPGGLNPPHTHPRATEVIFVLEGELDVGFITTANKLFAKTVKKGEVFVFPRGLIHYQKNNDKAKPASVISAFNSQLPGTQSIAATLFTATPAIPDHVLTTTFQIG 204          
The following BLAST results are available for this feature:
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
OXO2_HORVU1.915e-2550.91Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1[more]
GER2_WHEAT2.502e-2550.91Oxalate oxidase GF-2.8 OS=Triticum aestivum PE=1 S... [more]
NEC1_NICLS9.506e-2549.11Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana s... [more]
GL111_ARATH1.242e-2448.70Germin-like protein subfamily 1 member 11 OS=Arabi... [more]
GER3_WHEAT2.118e-2450.00Oxalate oxidase GF-3.8 OS=Triticum aestivum PE=1 S... [more]
GL41_ORYSJ2.766e-2448.70Germin-like protein 4-1 OS=Oryza sativa subsp. jap... [more]
OXO1_HORVU3.612e-2449.09Oxalate oxidase 1 OS=Hordeum vulgare PE=1 SV=1[more]
NEC1_NICPL3.612e-2449.54Nectarin-1 OS=Nicotiana plumbaginifolia GN=NEC1 PE... [more]
GL32_ORYSJ4.718e-2448.60Putative germin-like protein 3-2 OS=Oryza sativa s... [more]
GL24_ARATH4.718e-2447.75Germin-like protein subfamily 2 member 4 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00596 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00596 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623505 ID=BQ623505; Name=BQ623505; organism=Citrus sinensis; type=EST; length=523bp
AGTTTCACCTCTTCCGACTTGACTTGGATGTCGGCGGAATAAACCCGCCT
CATACGCATCCTCGTGGAACTGAGGCTGGTATTGTTACCAGAGGAACGTT
GCTCGTAGGTATAGTAACAACTAATAATACCTTTTTCTCAAAGGTCTTGA
CTCCCGGGAAGGTGTTCTTAATTCCTAGAGCACTGGTTCACTTCCAACTA
AATGTTGGAAACGAGCCGGCCACCTTTATACCTATTTTCAATACTCAAAA
TCCTGGCGTTTCGGATTCAATCGGTACTATATTTGACGCAACGCCTCCCG
TTCCCAATGAAGTGTTGACCAAATCTTTCCGAGTGGGTGATGATGTGATC
AATGCCATCAGAGCAGCCCGAGCCCAATCAAGCTAGATTAACATCCTCGA
TGTTCGATCGATATCCTTTATGTCTCACAACTAATGGATGAGATCTGGTG
TGTGTACTAATTATTAAATAAAGAATAAAGCTGAGACAACCAATAATTAT
AGAATAAAAAAAAAAAAAAAAAA
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