BQ623505

Overview
NameBQ623505
Unique NameBQ623505
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length523
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL812_ORYSJ (Germin-like protein 8-12 OS=Oryza sativa subsp. japonica GN=Os08g0231400 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.416e-22
Identity = 52/111 (46.85%), Postives = 73/111 (65.77%), Query Frame = 3
Query:    9 LFRLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTTN-NTFFSKVLTPGKVFLIPRALVHFQLNVGNE-PATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV 335
            L R+D    G+NPPH HPR TE   V  GTL VG VT+N N  FSKV+  G VF+ P+A++HFQ+N+ ++ PA      ++QNPGV      +F + PP+ ++VLTK+F+V
Sbjct:   97 LARIDYAPMGVNPPHIHPRATELLTVLEGTLYVGFVTSNPNKLFSKVVCKGDVFVFPKAMIHFQMNLDHDKPAVAQSALSSQNPGVITIASAVFGSQPPISDDVLTKAFQV 207          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL117_ARATH (Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana GN=At5g39150 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 5.767e-22
Identity = 50/116 (43.10%), Postives = 73/116 (62.93%), Query Frame = 3
Query:    9 LFRLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTTN---NTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRVGDDV 347
            L R+D    G NPPHTHPR TE  ++  GTL VG V++N   N  F+KVL PG VF+ P  ++HFQ+N+G  PA      ++QN GV     T+F +TPP+  ++L ++F++  +V
Sbjct:   96 LVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAFQLDVNV 211          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL115_ARATH (Germin-like protein subfamily 1 member 15 OS=Arabidopsis thaliana GN=At5g39120 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 5.767e-22
Identity = 50/116 (43.10%), Postives = 73/116 (62.93%), Query Frame = 3
Query:    9 LFRLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTTN---NTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRVGDDV 347
            L R+D    G NPPHTHPR TE  ++  GTL VG V++N   N  F+KVL PG VF+ P  ++HFQ+N+G  PA      ++QN GV     T+F +TPP+  ++L ++F++  +V
Sbjct:   96 LVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAFQLDVNV 211          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL114_ARATH (Germin-like protein subfamily 1 member 14 OS=Arabidopsis thaliana GN=At5g39110 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 5.767e-22
Identity = 50/116 (43.10%), Postives = 73/116 (62.93%), Query Frame = 3
Query:    9 LFRLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTTN---NTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRVGDDV 347
            L R+D    G NPPHTHPR TE  ++  GTL VG V++N   N  F+KVL PG VF+ P  ++HFQ+N+G  PA      ++QN GV     T+F +TPP+  ++L ++F++  +V
Sbjct:   97 LVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAFQLDVNV 212          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL112_ARATH (Putative germin-like protein subfamily 1 member 12 OS=Arabidopsis thaliana GN=At5g38960 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 5.767e-22
Identity = 50/115 (43.48%), Postives = 69/115 (60.00%), Query Frame = 3
Query:    9 LFRLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTT--NNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRVGDDV 347
            L R+D  + G NPPHTHPR TE  +V  GTL VG  ++   N  F+K L  G VF+ P  L+HFQ+N+G +PA      ++QNPGV     T+F + PP+   VL K+F++   V
Sbjct:  100 LVRIDYGINGQNPPHTHPRATEILLVQEGTLFVGFFSSFPENRLFNKTLNKGDVFVFPEGLIHFQVNIGKQPAVAFASLSSQNPGVIIIGNTLFGSKPPIDPNVLAKAFQLDPKV 214          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL116_ARATH (Germin-like protein subfamily 1 member 16 OS=Arabidopsis thaliana GN=At5g39130 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 7.532e-22
Identity = 51/116 (43.97%), Postives = 73/116 (62.93%), Query Frame = 3
Query:    9 LFRLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTTN---NTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRVGDDV 347
            L R+D    G NPPHTHPRG+E  ++  GTL VG V++N   N  F+KVL PG VF+ P  ++HFQLN+G  PA      ++QN GV     T+F + PP+  E+L ++F++  +V
Sbjct:   96 LVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQLNIGKIPAIAFAGLSSQNAGVITIANTVFGSNPPIYPELLARAFQLDANV 211          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL23_ORYSJ (Putative germin-like protein 2-3 OS=Oryza sativa subsp. japonica GN=Os02g0491800 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 9.837e-22
Identity = 50/111 (45.05%), Postives = 69/111 (62.16%), Query Frame = 3
Query:    9 LFRLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTTN--NTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV 335
            L R+D  + G+NPPHTHPR TE   V  G+L VG VT+N  N  F+KV+  G VF+ P+ LVHFQ N G   A  I   ++QNPGV      +F + P + +++L K+F+V
Sbjct:  101 LARIDYALHGLNPPHTHPRATEILTVLEGSLYVGFVTSNPENKLFTKVINKGDVFVFPKGLVHFQFNYGTTDAVAIVALSSQNPGVITVANAVFGSKPSITDDILAKAFQV 211          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL120_ARATH (Germin-like protein subfamily 1 member 20 OS=Arabidopsis thaliana GN=GLP5A PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.285e-21
Identity = 51/116 (43.97%), Postives = 72/116 (62.07%), Query Frame = 3
Query:    9 LFRLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTTN---NTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRVGDDV 347
            L R+D    G NPPHTHPRG+E  ++  GTL VG V++N   N  F+KVL PG VF+ P  ++HFQ+NVG  PA      ++QN GV     T+F + PP+  E+L ++F++   V
Sbjct:   96 LVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQVNVGKIPAVAFAGLSSQNAGVITIANTVFGSNPPIYPELLARAFQLDASV 211          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL118_ARATH (Germin-like protein subfamily 1 member 18 OS=Arabidopsis thaliana GN=GLP2A PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 1.285e-21
Identity = 51/116 (43.97%), Postives = 72/116 (62.07%), Query Frame = 3
Query:    9 LFRLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTTN---NTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRVGDDV 347
            L R+D    G NPPHTHPRG+E  ++  GTL VG V++N   N  F+KVL PG VF+ P  ++HFQ+NVG  PA      ++QN GV     T+F + PP+  E+L ++F++   V
Sbjct:   96 LVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQVNVGKIPAVAFAGLSSQNAGVITIANTVFGSNPPIYPELLARAFQLDASV 211          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL88_ORYSJ (Germin-like protein 8-8 OS=Oryza sativa subsp. japonica GN=Os08g0189700 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.678e-21
Identity = 53/110 (48.18%), Postives = 68/110 (61.82%), Query Frame = 3
Query:   15 RLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTT--NNTFFSKVLTPGKVFLIPRALVHFQLNVG-NEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV 335
            R+D    G NPPHTHPR TE   V  GTL VG VT+  NNT FSKVL  G VF+ P  L+HFQ N   ++PA  I   ++QNPG       +F + PP+ ++VL K+F+V
Sbjct:   97 RIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSNPNNTLFSKVLNKGDVFVFPEGLIHFQFNPNPHQPAVAIAALSSQNPGAITIANAVFGSKPPISDKVLAKAFQV 206          
The following BLAST results are available for this feature:
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
GL812_ORYSJ4.416e-2246.85Germin-like protein 8-12 OS=Oryza sativa subsp. ja... [more]
GL117_ARATH5.767e-2243.10Germin-like protein subfamily 1 member 17 OS=Arabi... [more]
GL115_ARATH5.767e-2243.10Germin-like protein subfamily 1 member 15 OS=Arabi... [more]
GL114_ARATH5.767e-2243.10Germin-like protein subfamily 1 member 14 OS=Arabi... [more]
GL112_ARATH5.767e-2243.48Putative germin-like protein subfamily 1 member 12... [more]
GL116_ARATH7.532e-2243.97Germin-like protein subfamily 1 member 16 OS=Arabi... [more]
GL23_ORYSJ9.837e-2245.05Putative germin-like protein 2-3 OS=Oryza sativa s... [more]
GL120_ARATH1.285e-2143.97Germin-like protein subfamily 1 member 20 OS=Arabi... [more]
GL118_ARATH1.285e-2143.97Germin-like protein subfamily 1 member 18 OS=Arabi... [more]
GL88_ORYSJ1.678e-2148.18Germin-like protein 8-8 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00596 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00596 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623505 ID=BQ623505; Name=BQ623505; organism=Citrus sinensis; type=EST; length=523bp
AGTTTCACCTCTTCCGACTTGACTTGGATGTCGGCGGAATAAACCCGCCT
CATACGCATCCTCGTGGAACTGAGGCTGGTATTGTTACCAGAGGAACGTT
GCTCGTAGGTATAGTAACAACTAATAATACCTTTTTCTCAAAGGTCTTGA
CTCCCGGGAAGGTGTTCTTAATTCCTAGAGCACTGGTTCACTTCCAACTA
AATGTTGGAAACGAGCCGGCCACCTTTATACCTATTTTCAATACTCAAAA
TCCTGGCGTTTCGGATTCAATCGGTACTATATTTGACGCAACGCCTCCCG
TTCCCAATGAAGTGTTGACCAAATCTTTCCGAGTGGGTGATGATGTGATC
AATGCCATCAGAGCAGCCCGAGCCCAATCAAGCTAGATTAACATCCTCGA
TGTTCGATCGATATCCTTTATGTCTCACAACTAATGGATGAGATCTGGTG
TGTGTACTAATTATTAAATAAAGAATAAAGCTGAGACAACCAATAATTAT
AGAATAAAAAAAAAAAAAAAAAA
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