BQ623505

Overview
NameBQ623505
Unique NameBQ623505
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length523
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL86_ORYSJ (Germin-like protein 8-6 OS=Oryza sativa subsp. japonica GN=Os08g0189500 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.678e-21
Identity = 54/110 (49.09%), Postives = 68/110 (61.82%), Query Frame = 3
Query:   15 RLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTT--NNTFFSKVLTPGKVFLIPRALVHFQLNVG-NEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV 335
            R+D    G NPPHTHPR TE   V  GTL VG VT+  NNT FSKVL  G VF+ P  L+HFQ N   ++PA  I   ++QNPG       +F + PP+ +EVL K+F+V
Sbjct:   98 RIDYAPLGQNPPHTHPRATEILTVLEGTLYVGFVTSNPNNTLFSKVLKKGDVFVFPVGLIHFQFNPNPHQPAVAIAALSSQNPGAITIANAVFGSKPPISDEVLAKAFQV 207          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL82_ORYSJ (Germin-like protein 8-2 OS=Oryza sativa subsp. japonica GN=GER3 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.678e-21
Identity = 52/110 (47.27%), Postives = 68/110 (61.82%), Query Frame = 3
Query:   15 RLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTTN--NTFFSKVLTPGKVFLIPRALVHFQLNVG-NEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV 335
            RLD    G+NPPHTHPR TE   V  GTL VG VT+N  N   SKVL  G VF+ P  L+HFQ N   ++PA  I   ++QNPGV      +F + PP+ +++L K+F+V
Sbjct:  100 RLDFAPLGLNPPHTHPRATEIFTVLEGTLYVGFVTSNPDNRLLSKVLNKGDVFVFPEGLIHFQFNPNPHKPAVAIAALSSQNPGVITIANAVFGSNPPISDDILMKAFQV 209          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL81_ORYSJ (Putative germin-like protein 8-1 OS=Oryza sativa subsp. japonica GN=Os08g0188900 PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.678e-21
Identity = 50/112 (44.64%), Postives = 71/112 (63.39%), Query Frame = 3
Query:    9 LFRLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTTN--NTFFSKVLTPGKVFLIPRALVHFQLNVG-NEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV 335
            + R+D    G+NPPHTHPR TE   V  GTL VG VT+N  N  FSKVL  G VF+ P+ L+HFQ N+  ++PA      ++QNPG+      +F + PP+ +++L K+F+V
Sbjct:   98 IVRVDYAPLGLNPPHTHPRATEIFTVLEGTLYVGFVTSNPDNKLFSKVLNKGDVFVFPKGLIHFQFNLDPHKPAIATSAISSQNPGIITIANAVFRSNPPISDDILAKAFQV 209          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL16_ARATH (Germin-like protein subfamily 1 member 6 OS=Arabidopsis thaliana GN=At3g04200 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.678e-21
Identity = 53/112 (47.32%), Postives = 67/112 (59.82%), Query Frame = 3
Query:    9 LFRLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTTN---NTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV 335
            L RLD   GG NPPH HPR TE  +VT+G LLVG V++N   N  F KVL  G VF+ P  L+HFQ+NV    A     F +QNPG       +F + P +P EVL K+F++
Sbjct:   99 LARLDFAQGGQNPPHIHPRATEILVVTKGKLLVGFVSSNQDNNRLFYKVLKRGDVFVFPIGLIHFQMNVRRTRAVAFAGFGSQNPGTIRIADAVFGSNPSIPQEVLAKAFQL 210          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL113_ARATH (Germin-like protein subfamily 1 member 13 OS=Arabidopsis thaliana GN=GLP6 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.678e-21
Identity = 49/112 (43.75%), Postives = 71/112 (63.39%), Query Frame = 3
Query:    9 LFRLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTTN---NTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV 335
            L R+D    G NPPHTHPR TE  ++  GTL VG V++N   N  F+KVL PG VF+ P  ++HFQ+N+G  PA      ++QN GV     T+F +TPP+  ++L ++F++
Sbjct:   97 LVRIDYAPYGQNPPHTHPRATEILVLIEGTLYVGFVSSNQDNNRLFAKVLYPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAFQL 208          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL18_ARATH (Germin-like protein subfamily 1 member 8 OS=Arabidopsis thaliana GN=GLP9 PE=2 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 2.191e-21
Identity = 51/112 (45.54%), Postives = 68/112 (60.71%), Query Frame = 3
Query:    9 LFRLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTTN---NTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV 335
            L R+D    G NPPHTHPR TE  +V +GTLLVG +++N   N  F+K L  G VF+ P  L+HFQ N+G  PA  I   ++QN GV     TIF + P V   VL ++F++
Sbjct:   99 LVRIDYAPNGQNPPHTHPRATEILVVQQGTLLVGFISSNQDGNRLFAKTLNVGDVFVFPEGLIHFQFNLGGTPAVAIAALSSQNAGVITIANTIFGSKPDVDPNVLARAFQM 210          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL87_ORYSJ (Germin-like protein 8-7 OS=Oryza sativa subsp. japonica GN=GER6 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 2.862e-21
Identity = 51/110 (46.36%), Postives = 68/110 (61.82%), Query Frame = 3
Query:   15 RLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTT--NNTFFSKVLTPGKVFLIPRALVHFQLNVG-NEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV 335
            R+D    G NPPHTHPR TE   V  GTL VG VT+  NNT FSKVL  G VF+ P  L+HFQ N   ++PA  +   ++QNPG       +F + PP+ +++L K+F+V
Sbjct:   98 RIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSNPNNTLFSKVLNKGDVFVFPEGLIHFQFNPNPHQPAVALAALSSQNPGAITIANAVFGSKPPISDDILAKAFQV 207          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL119_ARATH (Germin-like protein subfamily 1 member 19 OS=Arabidopsis thaliana GN=At5g39180 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 2.862e-21
Identity = 49/116 (42.24%), Postives = 72/116 (62.07%), Query Frame = 3
Query:    9 LFRLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTTN---NTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRVGDDV 347
            L R+D    G NPPHTHPR TE  ++  GTL VG V++N   N  F+KVL PG VF+ P  ++HFQ+N+G  PA      ++QN GV      +F +TPP+  ++L ++F++  +V
Sbjct:   96 LVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADIVFGSTPPINPDILAQAFQLDVNV 211          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL810_ORYSJ (Germin-like protein 8-10 OS=Oryza sativa subsp. japonica GN=GLP2 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 4.882e-21
Identity = 53/110 (48.18%), Postives = 67/110 (60.91%), Query Frame = 3
Query:   15 RLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTT--NNTFFSKVLTPGKVFLIPRALVHFQLNVG-NEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV 335
            R+D    G NPPHTHPR TE   V  GTL VG VT+  NNT FSKVL  G VF+ P  L+HFQ N   ++PA  I   ++QNPG       +F + PP+ + VL K+F+V
Sbjct:   97 RIDYAPLGENPPHTHPRATEILTVLEGTLYVGFVTSNPNNTLFSKVLNKGDVFVFPEGLIHFQFNPNPHQPAVAIAALSSQNPGAITIANAVFGSKPPISDIVLAKAFQV 206          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL19_ARATH (Putative germin-like protein subfamily 1 member 9 OS=Arabidopsis thaliana GN=At5g38910 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 4.882e-21
Identity = 52/111 (46.85%), Postives = 66/111 (59.46%), Query Frame = 3
Query:    9 LFRLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTTN--NTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV 335
            L R+D  V G NPPHTHPR +E   V  GTL VG VT+N  N  FSK L  G VF+ P+ L+HFQ+NVG  PA      ++QNPGV     T+F + P +    L  +F+V
Sbjct:   97 LVRIDYGVYGQNPPHTHPRASEVLYVAVGTLFVGFVTSNPENRLFSKTLYEGDVFVFPQGLIHFQVNVGKYPAVAFAGLSSQNPGVITIADTVFGSNPQIDPSFLASAFQV 207          
The following BLAST results are available for this feature:
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
GL86_ORYSJ1.678e-2149.09Germin-like protein 8-6 OS=Oryza sativa subsp. jap... [more]
GL82_ORYSJ1.678e-2147.27Germin-like protein 8-2 OS=Oryza sativa subsp. jap... [more]
GL81_ORYSJ1.678e-2144.64Putative germin-like protein 8-1 OS=Oryza sativa s... [more]
GL16_ARATH1.678e-2147.32Germin-like protein subfamily 1 member 6 OS=Arabid... [more]
GL113_ARATH1.678e-2143.75Germin-like protein subfamily 1 member 13 OS=Arabi... [more]
GL18_ARATH2.191e-2145.54Germin-like protein subfamily 1 member 8 OS=Arabid... [more]
GL87_ORYSJ2.862e-2146.36Germin-like protein 8-7 OS=Oryza sativa subsp. jap... [more]
GL119_ARATH2.862e-2142.24Germin-like protein subfamily 1 member 19 OS=Arabi... [more]
GL810_ORYSJ4.882e-2148.18Germin-like protein 8-10 OS=Oryza sativa subsp. ja... [more]
GL19_ARATH4.882e-2146.85Putative germin-like protein subfamily 1 member 9 ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00596 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00596 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623505 ID=BQ623505; Name=BQ623505; organism=Citrus sinensis; type=EST; length=523bp
AGTTTCACCTCTTCCGACTTGACTTGGATGTCGGCGGAATAAACCCGCCT
CATACGCATCCTCGTGGAACTGAGGCTGGTATTGTTACCAGAGGAACGTT
GCTCGTAGGTATAGTAACAACTAATAATACCTTTTTCTCAAAGGTCTTGA
CTCCCGGGAAGGTGTTCTTAATTCCTAGAGCACTGGTTCACTTCCAACTA
AATGTTGGAAACGAGCCGGCCACCTTTATACCTATTTTCAATACTCAAAA
TCCTGGCGTTTCGGATTCAATCGGTACTATATTTGACGCAACGCCTCCCG
TTCCCAATGAAGTGTTGACCAAATCTTTCCGAGTGGGTGATGATGTGATC
AATGCCATCAGAGCAGCCCGAGCCCAATCAAGCTAGATTAACATCCTCGA
TGTTCGATCGATATCCTTTATGTCTCACAACTAATGGATGAGATCTGGTG
TGTGTACTAATTATTAAATAAAGAATAAAGCTGAGACAACCAATAATTAT
AGAATAAAAAAAAAAAAAAAAAA
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