BQ623505

Overview
NameBQ623505
Unique NameBQ623505
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length523
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL122_ORYSJ (Germin-like protein 12-2 OS=Oryza sativa subsp. japonica GN=Os12g0154800 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 3.499e-19
Identity = 49/113 (43.36%), Postives = 66/113 (58.41%), Query Frame = 3
Query:   15 RLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTTN-----NTFFSKVLTPGKVFLIPRALVHFQLNVG-NEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV 335
            R+D    G NPPHTHPR TE   V  GTL VG VT+N     N  F+K L  G VF+ P+ L+HFQ N   ++PA  I   ++QNPG       +F +  P+ ++VL K+F+V
Sbjct:   99 RIDYAPKGQNPPHTHPRATEILTVLEGTLYVGFVTSNQANGENKLFTKTLNKGDVFVFPQGLIHFQFNPSYDKPAVAIAALSSQNPGAITIANAVFGSNSPISDDVLAKAFQV 211          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL21_ARATH (Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana GN=GLP4 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 5.968e-19
Identity = 47/92 (51.09%), Postives = 56/92 (60.87%), Query Frame = 3
Query:    9 LFRLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIF 284
            L R+D   GG+NPPHTHPR TE   V  GTL VG +TT N   S+ L  G VF  P+ LVHFQ N G+ PA+ I  FN+Q PG      T+F
Sbjct:   95 LSRIDYAPGGLNPPHTHPRATEVVFVLEGTLDVGFLTTANKLISQSLKKGDVFAFPKGLVHFQKNNGDVPASVIAAFNSQLPGTQSLGATLF 186          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL15_ARATH (Germin-like protein subfamily 1 member 5 OS=Arabidopsis thaliana GN=At3g04190 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.268e-18
Identity = 46/108 (42.59%), Postives = 64/108 (59.26%), Query Frame = 3
Query:   15 RLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTTNN---TFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSF 329
            R+D   GG+ PPHTHPRG+E  +V +G L VG V++N    T F+KVL PG VF+ P+ L+ F  N+G   A  I    +QNPG       +F + P +  +VL K+F
Sbjct:  100 RIDFAPGGLYPPHTHPRGSEIFLVMKGKLFVGFVSSNEYNYTLFTKVLYPGDVFVFPKGLIQFHANIGKTNAVVIAATGSQNPGRIIIGNAVFGSKPLIDPKVLAKAF 207          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GLT3_ARATH (Germin-like protein subfamily T member 3 OS=Arabidopsis thaliana GN=At1g74820 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 2.962e-18
Identity = 42/108 (38.89%), Postives = 64/108 (59.26%), Query Frame = 3
Query:    9 LFRLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFR 332
            ++ + +  GG N PH+HP  TEAG+V  G++LVG +TTN T +SKV+ PG +F+IP  L+H++ NVG      + +     P       T+    P +PNEVL  +F+
Sbjct:  105 MYNVAIAPGGYNQPHSHPGVTEAGVVIEGSVLVGFLTTNYTLYSKVIGPGDMFVIPPGLIHYEGNVGKTQCRLLTVVADDLPSEVGVPHTLLATKPAIPNEVLISAFK 212          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL31_ORYSJ (Germin-like protein 3-1 OS=Oryza sativa subsp. japonica GN=Os03g0179000 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 3.868e-18
Identity = 46/113 (40.71%), Postives = 71/113 (62.83%), Query Frame = 3
Query:   15 RLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGN-EPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV-GDDV 347
            R+DL  GG+ PPH+HPR +EA +V  G++LVG   T+   ++++L  G+ F+ PRA+VHF  N+    PA  +   N+Q+PG      + F   P +P+EVL K+F++ G DV
Sbjct:  103 RIDLAPGGMAPPHSHPRASEAALVLSGSVLVGFADTSYRLYTQLLRAGEAFVFPRAMVHFLYNMDTAAPAVVLSGLNSQSPGAQLVPFSAFRTEPRLPDEVLKKAFKITGQDV 215          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL14_ARATH (Germin-like protein subfamily 1 member 4 OS=Arabidopsis thaliana GN=At3g04180 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 3.868e-18
Identity = 45/108 (41.67%), Postives = 65/108 (60.19%), Query Frame = 3
Query:   15 RLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTTNN---TFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSF 329
            R D   GG++PPHTHPRG++  +V +G L VG V++N    T F+KVL PG VF+ P+ L+HF  N+G   A  I    +Q+PG       +F + P +  +VL K+F
Sbjct:  100 RYDFAPGGLDPPHTHPRGSQIFLVMKGKLFVGFVSSNEYNYTLFTKVLYPGDVFVFPKGLIHFHANIGETNAVVISAGGSQDPGRIIIGDAVFGSKPLIDPKVLAKAF 207          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL13_ARATH (Germin-like protein subfamily 1 member 3 OS=Arabidopsis thaliana GN=At3g04170 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 3.868e-18
Identity = 46/108 (42.59%), Postives = 64/108 (59.26%), Query Frame = 3
Query:   15 RLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTTNN---TFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSF 329
            R+D   GG+ PPH HPR +E  +V +G LLVG V++N+   T FSK+L PG VF+ P  LV F  N+G   A  I    +QNPG       +F + PP+  ++L K+F
Sbjct:   97 RIDFAPGGLIPPHIHPRASEIILVIKGKLLVGFVSSNDYNYTLFSKILYPGDVFVHPIGLVQFHANIGKTNAVAIGAVGSQNPGYISVGDAVFGSKPPIDPKILAKAF 204          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL32_ARATH (Germin-like protein subfamily 3 member 2 OS=Arabidopsis thaliana GN=At3g10080 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 5.052e-18
Identity = 43/105 (40.95%), Postives = 64/105 (60.95%), Query Frame = 3
Query:   15 RLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSF 329
            R DL  G INPPH HPR TE   + +G +  G V +NN  ++KV+  G++ + P+ LVHFQ+NVG+  AT +   N+QNPG+      +F +   +  E+L K+F
Sbjct:  103 RADLKPGSINPPHYHPRATEVAHLVKGRVYSGFVDSNNKVYAKVMEEGEMMVYPKGLVHFQMNVGDVTATIVGGLNSQNPGIQKIPSVVFGS--GINEELLMKAF 205          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL14_ORYSJ (Germin-like protein 1-4 OS=Oryza sativa subsp. japonica GN=Os01g0952100 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 8.066e-16
Identity = 43/111 (38.74%), Postives = 65/111 (58.56%), Query Frame = 3
Query:   33 GGINPPHTHPRGTEAGIVTRGTLLVGIVTT-----NNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIF-DATPPVPNEVLTKSFRVGDDV 347
            GG NPPH+HPR TE   V  G L VG V       ++   ++V+  G VF+ PR L+H++ +VG +PA  I  F++Q PG   +   +F  ++P VP +VL ++F+V   V
Sbjct:  114 GGANPPHSHPRATEILFVADGLLEVGFVVATAAPASSRLITRVVPKGGVFVFPRGLLHYERSVGEKPAVAISAFDSQLPGTQAAADALFGSSSPAVPTDVLARAFQVDGGV 224          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL92_ORYSJ (Putative germin-like protein 9-2 OS=Oryza sativa subsp. japonica GN=Os09g0568600 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.053e-15
Identity = 40/98 (40.82%), Postives = 57/98 (58.16%), Query Frame = 3
Query:   39 INPPHTHPRGTEAGIVTRGTLLVGIVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFR 332
            +NPPHTHPR  E  +V  G L VG + T N  +++ L  G +F+ P+ +VHFQ N GN+PA  +  F +  PGV     T+F     + + VL KSF+
Sbjct:  100 VNPPHTHPRSAELLLVVDGALSVGFIDTTNKLYTQDLAAGDMFVFPKGMVHFQFNSGNQPAMALSAFGSAAPGVVPVPVTVFGT--GIDDAVLAKSFK 195          
The following BLAST results are available for this feature:
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
GL122_ORYSJ3.499e-1943.36Germin-like protein 12-2 OS=Oryza sativa subsp. ja... [more]
GL21_ARATH5.968e-1951.09Germin-like protein subfamily 2 member 1 OS=Arabid... [more]
GL15_ARATH2.268e-1842.59Germin-like protein subfamily 1 member 5 OS=Arabid... [more]
GLT3_ARATH2.962e-1838.89Germin-like protein subfamily T member 3 OS=Arabid... [more]
GL31_ORYSJ3.868e-1840.71Germin-like protein 3-1 OS=Oryza sativa subsp. jap... [more]
GL14_ARATH3.868e-1841.67Germin-like protein subfamily 1 member 4 OS=Arabid... [more]
GL13_ARATH3.868e-1842.59Germin-like protein subfamily 1 member 3 OS=Arabid... [more]
GL32_ARATH5.052e-1840.95Germin-like protein subfamily 3 member 2 OS=Arabid... [more]
GL14_ORYSJ8.066e-1638.74Germin-like protein 1-4 OS=Oryza sativa subsp. jap... [more]
GL92_ORYSJ1.053e-1540.82Putative germin-like protein 9-2 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00596 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00596 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623505 ID=BQ623505; Name=BQ623505; organism=Citrus sinensis; type=EST; length=523bp
AGTTTCACCTCTTCCGACTTGACTTGGATGTCGGCGGAATAAACCCGCCT
CATACGCATCCTCGTGGAACTGAGGCTGGTATTGTTACCAGAGGAACGTT
GCTCGTAGGTATAGTAACAACTAATAATACCTTTTTCTCAAAGGTCTTGA
CTCCCGGGAAGGTGTTCTTAATTCCTAGAGCACTGGTTCACTTCCAACTA
AATGTTGGAAACGAGCCGGCCACCTTTATACCTATTTTCAATACTCAAAA
TCCTGGCGTTTCGGATTCAATCGGTACTATATTTGACGCAACGCCTCCCG
TTCCCAATGAAGTGTTGACCAAATCTTTCCGAGTGGGTGATGATGTGATC
AATGCCATCAGAGCAGCCCGAGCCCAATCAAGCTAGATTAACATCCTCGA
TGTTCGATCGATATCCTTTATGTCTCACAACTAATGGATGAGATCTGGTG
TGTGTACTAATTATTAAATAAAGAATAAAGCTGAGACAACCAATAATTAT
AGAATAAAAAAAAAAAAAAAAAA
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