BQ623505

Overview
NameBQ623505
Unique NameBQ623505
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length523
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL34_ARATH (Germin-like protein subfamily 3 member 4 OS=Arabidopsis thaliana GN=At5g61750 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.376e-15
Identity = 42/90 (46.67%), Postives = 55/90 (61.11%), Query Frame = 3
Query:   15 RLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIF 284
            R DL+  G  P H+HPR +E   V +G +  G V TNN  F  VL  G VF+ P+ L+HF L+ G EPAT    +N+QNPGV  +IG +F
Sbjct:   94 RTDLERDGSVPFHSHPRSSEMLFVVKGVVFAGFVDTNNKIFQTVLQKGDVFVFPKGLLHFCLSGGFEPATAFSFYNSQNPGVV-NIGEVF 182          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL12_ARATH (Putative germin-like protein subfamily 1 member 2 OS=Arabidopsis thaliana GN=At3g04150 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.376e-15
Identity = 44/108 (40.74%), Postives = 61/108 (56.48%), Query Frame = 3
Query:   15 RLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTTNN---TFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSF 329
            RLD   GG  PPH HPR ++  +V +G L VG V++N+   T FSK+L PG VF  P  LV F  N G   A  I +  +Q+PGV      +F + P +  ++L K+F
Sbjct:  100 RLDFAPGGQLPPHIHPRASQIILVLKGQLSVGFVSSNDYNYTLFSKILYPGDVFAFPIGLVQFHANTGKTHAVAIGVVGSQDPGVIPIGDAVFGSNPLIDPKLLAKAF 207          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: AB19B_PRUPE (Auxin-binding protein ABP19b OS=Prunus persica GN=ABP19B PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 6.828e-15
Identity = 36/84 (42.86%), Postives = 55/84 (65.48%), Query Frame = 3
Query:    9 LFRLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGV 260
            L RLDL  GG+ P HTHP  +E  +V +GT++ G V ++NT + K L  G + + P+ L+HFQ+N G+ PA   P F++ +PG+
Sbjct:   87 LARLDLGPGGVVPFHTHPGASEVLLVVQGTIIAGFVASDNTPYLKTLKKGDIIVFPQGLLHFQVNGGDTPAIAFPSFSSPSPGL 170          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: AB19A_PRUPE (Auxin-binding protein ABP19a OS=Prunus persica GN=ABP19A PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 8.918e-15
Identity = 36/84 (42.86%), Postives = 54/84 (64.29%), Query Frame = 3
Query:    9 LFRLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGV 260
            L RLDL  GG+ P HTHP  +E  +V +GT++ G V ++NT + K L  G + + P+ L+HFQ+N G  PA   P F++ +PG+
Sbjct:   87 LARLDLGPGGVIPFHTHPGASEVLLVVQGTIIAGFVASDNTPYLKTLKKGDIMVFPQGLLHFQVNGGGTPALAFPSFSSPSPGL 170          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL93_ORYSJ (Germin-like protein 9-3 OS=Oryza sativa subsp. japonica GN=Os09g0568700 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.987e-14
Identity = 38/98 (38.78%), Postives = 56/98 (57.14%), Query Frame = 3
Query:   39 INPPHTHPRGTEAGIVTRGTLLVGIVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFR 332
            +NPPHTHPR  E  ++  G L VG V T N  +++ L  G +F+ P+ +VHFQ N GN+PA  +  F +   G+     T+F     + + VL KSF+
Sbjct:  100 LNPPHTHPRSAELLLLVDGALSVGFVDTTNKLYTQDLAAGDMFVFPKGMVHFQFNSGNQPAMALSAFGSAAAGLVSVPVTVFGTN--IDDAVLAKSFK 195          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL11_ARATH (Germin-like protein subfamily 1 member 1 OS=Arabidopsis thaliana GN=GLP7 PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 5.780e-14
Identity = 42/113 (37.17%), Postives = 61/113 (53.98%), Query Frame = 3
Query:   15 RLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGN-EPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKSFRV-GDDV 347
            RLD    G+ PPH HPR +E  +   G LLVG V T+   F++ L PG+ F+ P+ L+HF  N+     A  +   ++QNPG      + F + PP   EVL  ++ + G DV
Sbjct:   96 RLDFGGSGVVPPHVHPRASEVTVCLDGVLLVGFVDTSGRVFTQELHPGETFVFPKGLIHFLYNIDTVSSALAVSGLSSQNPGTQIVSLSSFISKPPFLVEVLKSAYDINGQDV 208          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: ABP20_PRUPE (Auxin-binding protein ABP20 OS=Prunus persica GN=ABP20 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.288e-13
Identity = 39/104 (37.50%), Postives = 60/104 (57.69%), Query Frame = 3
Query:   15 RLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTKS 326
            RLDL VGG+ P HTHP  +E  IV +GT+  G V ++NT + + L  G + + P+ L+HFQ+N G  PA     F + +PG+      +F     +P EV+ ++
Sbjct:   94 RLDLAVGGVVPFHTHPGASEVLIVAQGTICAGFVASDNTPYLQTLEKGDIMVFPQGLLHFQVNGGEAPALAFASFGSASPGLQILDFALF--KNDLPTEVIAQT 195          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL51_ORYSJ (Germin-like protein 5-1 OS=Oryza sativa subsp. japonica GN=Os05g0197200 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.682e-13
Identity = 41/109 (37.61%), Postives = 64/109 (58.72%), Query Frame = 3
Query:   15 RLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTT--NNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPG---VSDSIGTIFDATPPVPNEVLTKS 326
            R+D+  GG+ PPH HPR +E  +V  G +  G VT+  ++   +KVL  G VF +P+ LVHF  N G+EPA      ++QNPG   V+D++        P+P +++ K+
Sbjct:  107 RVDVAPGGVFPPHYHPRASETAVVLAGAVYFGFVTSYPDSRVVAKVLRRGDVFAVPQGLVHFLHNNGSEPAALYASLSSQNPGLVLVADAL-----LAAPLPVDLVAKT 210          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL31_ARATH (Germin-like protein subfamily 3 member 1 OS=Arabidopsis thaliana GN=GLP1 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.747e-13
Identity = 33/82 (40.24%), Postives = 50/82 (60.98%), Query Frame = 3
Query:   15 RLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGV 260
            RLDL   G+ P HTHP  +E   V  G++  G V++ N  + + L PG+V + P+ L+HFQ+N G   A+ +  FN+ NPG+
Sbjct:   88 RLDLAPKGVIPMHTHPGASEVLFVLTGSITAGFVSSANAVYVQTLKPGQVMVFPQGLLHFQINAGKSSASAVVTFNSANPGL 169          
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Match: GL111_ORYSJ (Germin-like protein 11-1 OS=Oryza sativa subsp. japonica GN=Os11g0537300 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.747e-13
Identity = 41/108 (37.96%), Postives = 55/108 (50.93%), Query Frame = 3
Query:   15 RLDLDVGGINPPHTHPRGTEAGIVTRGTLLVGIVTTNNTFFSKVLTPGKVFLIPRALVHFQLNVGNEPATFIPIFNTQNPGVSDSIGTIFDATPPVPNEVLTK--SFR 332
            R D+ V G   PH+HPR +E   V  G+++ G   T    F K L  G VF+ PR LVHF +N G   AT   + N+QNPGV      +F     V   ++ +  SFR
Sbjct:   99 RTDIAVSGAVLPHSHPRASEMMFVHSGSVVAGFFDTKGKLFQKTLAEGDVFIFPRGLVHFIMNYGFGLATTFSVLNSQNPGVVGITHAMFAPDSEVAEGLMARMLSFR 206          
The following BLAST results are available for this feature:
BLAST of BQ623505 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
GL34_ARATH1.376e-1546.67Germin-like protein subfamily 3 member 4 OS=Arabid... [more]
GL12_ARATH1.376e-1540.74Putative germin-like protein subfamily 1 member 2 ... [more]
AB19B_PRUPE6.828e-1542.86Auxin-binding protein ABP19b OS=Prunus persica GN=... [more]
AB19A_PRUPE8.918e-1542.86Auxin-binding protein ABP19a OS=Prunus persica GN=... [more]
GL93_ORYSJ1.987e-1438.78Germin-like protein 9-3 OS=Oryza sativa subsp. jap... [more]
GL11_ARATH5.780e-1437.17Germin-like protein subfamily 1 member 1 OS=Arabid... [more]
ABP20_PRUPE1.288e-1337.50Auxin-binding protein ABP20 OS=Prunus persica GN=A... [more]
GL51_ORYSJ1.682e-1337.61Germin-like protein 5-1 OS=Oryza sativa subsp. jap... [more]
GL31_ARATH3.747e-1340.24Germin-like protein subfamily 3 member 1 OS=Arabid... [more]
GL111_ORYSJ3.747e-1337.96Germin-like protein 11-1 OS=Oryza sativa subsp. ja... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00596 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00596 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623505 ID=BQ623505; Name=BQ623505; organism=Citrus sinensis; type=EST; length=523bp
AGTTTCACCTCTTCCGACTTGACTTGGATGTCGGCGGAATAAACCCGCCT
CATACGCATCCTCGTGGAACTGAGGCTGGTATTGTTACCAGAGGAACGTT
GCTCGTAGGTATAGTAACAACTAATAATACCTTTTTCTCAAAGGTCTTGA
CTCCCGGGAAGGTGTTCTTAATTCCTAGAGCACTGGTTCACTTCCAACTA
AATGTTGGAAACGAGCCGGCCACCTTTATACCTATTTTCAATACTCAAAA
TCCTGGCGTTTCGGATTCAATCGGTACTATATTTGACGCAACGCCTCCCG
TTCCCAATGAAGTGTTGACCAAATCTTTCCGAGTGGGTGATGATGTGATC
AATGCCATCAGAGCAGCCCGAGCCCAATCAAGCTAGATTAACATCCTCGA
TGTTCGATCGATATCCTTTATGTCTCACAACTAATGGATGAGATCTGGTG
TGTGTACTAATTATTAAATAAAGAATAAAGCTGAGACAACCAATAATTAT
AGAATAAAAAAAAAAAAAAAAAA
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