BQ623508
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_THECE (Elongation factor 1-alpha OS=Thermococcus celer GN=tuf PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 3.915e-38 Identity = 63/140 (45.00%), Postives = 95/140 (67.86%), Query Frame = 2 Query: 59 LAFNVKNVAVKDLKRGFVASNSKDDPA--REAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 472 + FNV+ V D+KRG VA ++ + P R F +Q+I++NHP I GY PVL HT +AV+F +L+ K+D R+G +E+ P+F+K GD+ +V + PTKPMV+E + P +GRFA+RDM QTVA G++ S++K + Sbjct: 289 IGFNVRGVGKNDIKRGDVAGHTNNPPTVVRPKDTFKAQIIVLNHPTAITVGYTPVLHAHTLQVAVRFEQLLAKLDPRTGNIVEENPQFIKTGDSAIVVLRPTKPMVIEPVKEIPQMGRFAIRDMGQTVAAGMVISIQKAE 428 HSP 2 Score: 43.1282 bits (100), Expect = 3.915e-38 Identity = 17/21 (80.95%), Postives = 20/21 (95.24%), Query Frame = 1 Query: 1 VKSVEMHHEALQEALPGDNVG 63 VKS+EMHHE +QEALPGDN+G Sbjct: 270 VKSIEMHHEPMQEALPGDNIG 290
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_PYRKO (Elongation factor 1-alpha OS=Pyrococcus kodakaraensis GN=tuf PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.914e-37 Identity = 63/140 (45.00%), Postives = 95/140 (67.86%), Query Frame = 2 Query: 59 LAFNVKNVAVKDLKRGFVASNSKDDPA--REAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 472 + FNV+ V D+KRG VA ++ + P R F +Q+I++NHP I GY PVL HT+ +AV+F +L+ K+D R+G +E+ P+F+K GD+ +V + PTK MV+E + P +GRFA+RDM QTVA G++ S++K D Sbjct: 289 IGFNVRGVGKNDIKRGDVAGHTTNPPTVVRPKDTFKAQIIVLNHPTAITVGYTPVLHAHTTQVAVRFEQLLAKLDPRTGNIVEENPQFIKTGDSAIVILRPTKAMVIEPVKEIPQMGRFAIRDMGQTVAAGMVISIQKAD 428 HSP 2 Score: 41.9726 bits (97), Expect = 1.914e-37 Identity = 17/21 (80.95%), Postives = 19/21 (90.48%), Query Frame = 1 Query: 1 VKSVEMHHEALQEALPGDNVG 63 VKS+EMHHE LQEA PGDN+G Sbjct: 270 VKSIEMHHEPLQEAYPGDNIG 290
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_THEGJ (Elongation factor 1-alpha OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=tuf PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 5.512e-37 Identity = 62/140 (44.29%), Postives = 95/140 (67.86%), Query Frame = 2 Query: 59 LAFNVKNVAVKDLKRGFVASNSKDDPA--REAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 472 + FNV+ V D+KRG VA ++ + P R F +Q+I++NHP I GY PVL HT+ +AV+F +L+ K+D R+G +E+ P+F+K GD+ +V + PTK MV+E + P +GRFA+RDM QTVA G++ S++K + Sbjct: 289 IGFNVRGVGKNDIKRGDVAGHTTNPPTVVRPKDTFKAQIIVLNHPTAITVGYTPVLHAHTTQVAVRFEQLLAKLDPRTGNIVEENPQFIKTGDSAIVILRPTKAMVIEPVKEIPQMGRFAIRDMGQTVAAGMVISIQKAE 428 HSP 2 Score: 41.9726 bits (97), Expect = 5.512e-37 Identity = 17/21 (80.95%), Postives = 19/21 (90.48%), Query Frame = 1 Query: 1 VKSVEMHHEALQEALPGDNVG 63 VKS+EMHHE LQEA PGDN+G Sbjct: 270 VKSIEMHHEPLQEAYPGDNIG 290
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_ARCFU (Elongation factor 1-alpha OS=Archaeoglobus fulgidus GN=tuf PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 7.181e-37 Identity = 62/131 (47.33%), Postives = 91/131 (69.47%), Query Frame = 2 Query: 59 LAFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVI 451 + FNV+ V+ KD++RG VA + D+P +FT+Q++++ HP I GY PV+ HT+ IA +F EL KID R+G+ E+ P+FLK GDA +VK+ PT+PMV+E D PP+GRFA+RDM T+ G++ Sbjct: 287 IGFNVRGVSKKDIRRGDVAGHP-DNPPTVVKDFTAQLVVLQHPTAITVGYTPVVHAHTAQIACRFVELQKKIDPRTGQVKEENPQFLKTGDAAIVKLEPTRPMVIERVKDIPPMGRFAIRDMGMTIGAGMV 416 HSP 2 Score: 41.2022 bits (95), Expect = 7.181e-37 Identity = 16/21 (76.19%), Postives = 19/21 (90.48%), Query Frame = 1 Query: 1 VKSVEMHHEALQEALPGDNVG 63 VKS+EMHHE +QEA PGDN+G Sbjct: 268 VKSIEMHHEPIQEAYPGDNIG 288
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_METHJ (Elongation factor 1-alpha OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=tuf PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.587e-36 Identity = 64/137 (46.72%), Postives = 91/137 (66.42%), Query Frame = 2 Query: 59 LAFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 469 + FNV+ + D++RG V S D+P A FT+Q++++ HP I GY PV CHT+ A F+ELV K+D R+G+ LE+ P FLK GDA ++K PTKP+ +E ++P LGRFA+RDM QT+A G+ +V KK Sbjct: 287 IGFNVRGIGKDDVRRGDVCGAS-DNPPAVAEEFTAQIVVLQHPSAITVGYTPVFHCHTAQTACTFTELVKKLDPRTGQTLEENPTFLKAGDAAIIKCHPTKPLCLENAKEFPQLGRFAIRDMGQTIAAGMCINVVKK 422 HSP 2 Score: 38.5058 bits (88), Expect = 1.587e-36 Identity = 14/21 (66.67%), Postives = 19/21 (90.48%), Query Frame = 1 Query: 1 VKSVEMHHEALQEALPGDNVG 63 VKS+EMHHE + +A+PGDN+G Sbjct: 268 VKSIEMHHEEIPQAVPGDNIG 288
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_PYRHO (Elongation factor 1-alpha OS=Pyrococcus horikoshii GN=tuf PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.570e-36 Identity = 59/138 (42.75%), Postives = 93/138 (67.39%), Query Frame = 2 Query: 59 LAFNVKNVAVKDLKRGFVASNSKDDPA--REAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 466 + FNV+ V+ D+KRG VA ++ P R F +Q+I++NHP I GY+PVL HT+ I V+F +++ K+D R+G +E+ P+F+K GD+ +V + P KP+V+E + P LGRFA+RDM T+A G++ S++K Sbjct: 289 IGFNVRGVSKNDIKRGDVAGHTDKPPTVVRTKDTFKAQIIVLNHPTAITVGYSPVLHAHTAQIPVRFEQILAKVDPRTGNIVEENPQFIKTGDSAIVVLRPMKPVVLEPVKEIPQLGRFAIRDMGMTIAAGMVISIQK 426 HSP 2 Score: 43.8986 bits (102), Expect = 4.570e-36 Identity = 18/21 (85.71%), Postives = 20/21 (95.24%), Query Frame = 1 Query: 1 VKSVEMHHEALQEALPGDNVG 63 VKS+EMHHE LQEALPGDN+G Sbjct: 270 VKSIEMHHEPLQEALPGDNIG 290
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_METJA (Elongation factor 1-alpha OS=Methanocaldococcus jannaschii GN=tuf PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.953e-36 Identity = 64/138 (46.38%), Postives = 93/138 (67.39%), Query Frame = 2 Query: 59 LAFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 472 + FNV+ V+ KD+KRG V + D+P A FT+Q++++ HP I GY PV HT+ +A F EL+ K+D R+G+ +E+ P+FLK GDA +VK+ PTKPMV+E + P LGRFA+RDM T+A G+ V+ K+ Sbjct: 291 IGFNVRGVSKKDIKRGDVCGHP-DNPPTVAEEFTAQIVVLQHPTAITVGYTPVFHAHTAQVACTFIELLKKLDPRTGQVIEENPQFLKTGDAAIVKIKPTKPMVIENVREIPQLGRFAIRDMGMTIAAGMAIDVKAKN 427 HSP 2 Score: 36.965 bits (84), Expect = 5.953e-36 Identity = 14/21 (66.67%), Postives = 18/21 (85.71%), Query Frame = 1 Query: 1 VKSVEMHHEALQEALPGDNVG 63 VKS+EMHHE + +A PGDN+G Sbjct: 272 VKSIEMHHEQIPQAEPGDNIG 292
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_PYRAB (Elongation factor 1-alpha OS=Pyrococcus abyssi GN=tuf PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 7.754e-36 Identity = 60/138 (43.48%), Postives = 91/138 (65.94%), Query Frame = 2 Query: 59 LAFNVKNVAVKDLKRGFVASNSKDDPA--REAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 466 + FNV+ V+ D+KRG VA + P R F +Q+I++NHP I GY+PVL HT+ + V+F +L+ KID R+G E+ P+F+K GD+ +V + P KP+V+E + P LGRFA+RDM T+A G++ S++K Sbjct: 289 IGFNVRGVSKNDIKRGDVAGHPDKPPTVVRTKDTFKAQIIVLNHPTAITVGYSPVLHAHTAQVPVRFEQLLAKIDPRTGNITEENPQFIKTGDSAIVVLRPMKPVVLEPVKELPQLGRFAIRDMGMTIAAGMVISIQK 426 HSP 2 Score: 43.8986 bits (102), Expect = 7.754e-36 Identity = 18/21 (85.71%), Postives = 20/21 (95.24%), Query Frame = 1 Query: 1 VKSVEMHHEALQEALPGDNVG 63 VKS+EMHHE LQEALPGDN+G Sbjct: 270 VKSIEMHHEPLQEALPGDNIG 290
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_METLZ (Elongation factor 1-alpha OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=tuf PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.316e-35 Identity = 64/137 (46.72%), Postives = 89/137 (64.96%), Query Frame = 2 Query: 59 LAFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 469 + FNV+ +A D++RG V ++ P A FT+QV+++ HP + GY PV CHTS A F+EL K+D RSG+ E+ P FLK GDA + + PT+P+V+ET + P LGRFAVRDM TVA G++ SV+ K Sbjct: 287 VGFNVRGIAKNDVRRGDVCGPIENPPT-VAEEFTAQVVVLQHPSVLSVGYTPVFHCHTSQTACMFTELNKKLDPRSGQVKEENPAFLKAGDAAICTITPTRPLVIETAKELPQLGRFAVRDMGMTVAAGLVLSVKAK 422 HSP 2 Score: 40.4318 bits (93), Expect = 1.316e-35 Identity = 17/21 (80.95%), Postives = 18/21 (85.71%), Query Frame = 1 Query: 1 VKSVEMHHEALQEALPGDNVG 63 VKS+EMHHE EALPGDNVG Sbjct: 268 VKSIEMHHEEFPEALPGDNVG 288
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_PYRWO (Elongation factor 1-alpha OS=Pyrococcus woesei GN=tuf PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.714e-35 Identity = 58/138 (42.03%), Postives = 94/138 (68.12%), Query Frame = 2 Query: 59 LAFNVKNVAVKDLKRGFVASNSKDDPA--REAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 466 + FNV+ V+ D+KRG VA ++ + P R F +Q+I++NHP I GY+PVL HT+ + V+F +L+ K+D ++G +E+ P+F+K GDA +V + P KP+V+E + P LGRFA+RDM T+A G++ S+++ Sbjct: 291 IGFNVRGVSKNDIKRGDVAGHTTNPPTVVRTKDTFKAQIIVLNHPTAITVGYSPVLHAHTAQVPVRFEQLLAKLDPKTGNIVEENPQFIKTGDAAIVILRPMKPVVLEPVKEIPQLGRFAIRDMGMTIAAGMVISIQR 428 HSP 2 Score: 42.743 bits (99), Expect = 1.714e-35 Identity = 17/21 (80.95%), Postives = 20/21 (95.24%), Query Frame = 1 Query: 1 VKSVEMHHEALQEALPGDNVG 63 VKS+EMHHE L+EALPGDN+G Sbjct: 272 VKSIEMHHEPLEEALPGDNIG 292 The following BLAST results are available for this feature:
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 171
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623508 ID=BQ623508; Name=BQ623508; organism=Citrus sinensis; type=EST; length=649bpback to top |