BQ623508
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_SULAC (Elongation factor 1-alpha OS=Sulfolobus acidocaldarius GN=tuf PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 5.321e-34 Identity = 68/137 (49.64%), Postives = 94/137 (68.61%), Query Frame = 2 Query: 59 LAFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 469 + FNV+ V KD+KRG VA S +P A FT+QVI++ HP +G GY PVL HT+ IA + SE+ ++ID ++GKE EK P+F+K GD+ +VK P K +V E F ++P LGRFA+RDM +TV VGVI V+ + Sbjct: 295 IGFNVRGVEKKDVKRGDVAG-SVQNPPTVADEFTAQVIVIWHPTAVGVGYTPVLHVHTASIACRVSEITSRIDPKTGKEAEKNPQFIKAGDSAIVKFKPIKELVAEKFREFPALGRFAMRDMGKTVGVGVIIDVKPR 430 HSP 2 Score: 31.187 bits (69), Expect = 5.321e-34 Identity = 11/21 (52.38%), Postives = 16/21 (76.19%), Query Frame = 1 Query: 1 VKSVEMHHEALQEALPGDNVG 63 V+S+E HH + +A PGDN+G Sbjct: 276 VRSIETHHTKIDKAEPGDNIG 296
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_METMP (Elongation factor 1-alpha OS=Methanococcus maripaludis GN=tuf PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 6.932e-34 Identity = 63/138 (45.65%), Postives = 92/138 (66.67%), Query Frame = 2 Query: 59 LAFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 472 + FNV+ V KD+KRG V ++ + P AA+FT+Q++++ HP + GY PV HT+ IA F EL K++ +G+ LE+ P FLK GDA +VK++PTKP+V+E+ + P LGRFA+RDM TVA G+ V K+ Sbjct: 291 IGFNVRGVGKKDIKRGDVLGHTTNPPT-VAADFTAQIVVLQHPSVMTVGYTPVFHAHTAQIACTFMELQKKLNPATGEVLEENPDFLKAGDAAIVKLMPTKPLVMESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427 HSP 2 Score: 35.8094 bits (81), Expect = 6.932e-34 Identity = 14/21 (66.67%), Postives = 17/21 (80.95%), Query Frame = 1 Query: 1 VKSVEMHHEALQEALPGDNVG 63 +K+VEMHHE L A PGDN+G Sbjct: 272 IKTVEMHHEQLPSAEPGDNIG 292
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_METM6 (Elongation factor 1-alpha OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=tuf PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 6.932e-34 Identity = 63/138 (45.65%), Postives = 92/138 (66.67%), Query Frame = 2 Query: 59 LAFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 472 + FNV+ V KD+KRG V ++ + P AA+FT+Q++++ HP + GY PV HT+ IA F EL K++ +G+ LE+ P FLK GDA +VK++PTKP+V+E+ + P LGRFA+RDM TVA G+ V K+ Sbjct: 291 IGFNVRGVGKKDIKRGDVLGHTTNPPT-VAADFTAQIVVLQHPSVMTVGYTPVFHAHTAQIACTFMELQKKLNPATGEVLEENPDFLKAGDAAIVKLMPTKPLVMESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427 HSP 2 Score: 35.8094 bits (81), Expect = 6.932e-34 Identity = 14/21 (66.67%), Postives = 17/21 (80.95%), Query Frame = 1 Query: 1 VKSVEMHHEALQEALPGDNVG 63 +K+VEMHHE L A PGDN+G Sbjct: 272 IKTVEMHHEQLPSAEPGDNIG 292
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_METM5 (Elongation factor 1-alpha OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=tuf PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 6.932e-34 Identity = 63/138 (45.65%), Postives = 92/138 (66.67%), Query Frame = 2 Query: 59 LAFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 472 + FNV+ V KD+KRG V ++ + P AA+FT+Q++++ HP + GY PV HT+ IA F EL K++ +G+ LE+ P FLK GDA +VK++PTKP+V+E+ + P LGRFA+RDM TVA G+ V K+ Sbjct: 291 IGFNVRGVGKKDIKRGDVLGHTTNPPT-VAADFTAQIVVLQHPSVMTVGYTPVFHAHTAQIACTFMELQKKLNPATGEVLEENPDFLKAGDAAIVKLMPTKPLVMESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427 HSP 2 Score: 35.8094 bits (81), Expect = 6.932e-34 Identity = 14/21 (66.67%), Postives = 17/21 (80.95%), Query Frame = 1 Query: 1 VKSVEMHHEALQEALPGDNVG 63 +K+VEMHHE L A PGDN+G Sbjct: 272 IKTVEMHHEQLPSAEPGDNIG 292
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_METBF (Elongation factor 1-alpha OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=tuf PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.176e-33 Identity = 60/137 (43.80%), Postives = 88/137 (64.23%), Query Frame = 2 Query: 59 LAFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 469 + +NV+ + D++RG V ++ D+P + A F Q++++ HP I GY PV HTS IA + EL K+D +SG+ E+ P FLK GDA +V + PTKPMV+E + P LGRFA+RDM T+A G+ SV++K Sbjct: 287 IGWNVRGIGKADVRRGDVCGHT-DNPPKVADTFVGQIVVLQHPSAITAGYTPVFHAHTSQIACQLIELNKKLDPKSGQVKEENPTFLKAGDAAIVTIKPTKPMVIEPVKEIPQLGRFAIRDMGMTIAAGMCMSVKQK 422 HSP 2 Score: 39.6614 bits (91), Expect = 1.176e-33 Identity = 15/21 (71.43%), Postives = 19/21 (90.48%), Query Frame = 1 Query: 1 VKSVEMHHEALQEALPGDNVG 63 VKS+EMHHE + +ALPGDN+G Sbjct: 268 VKSIEMHHEEIPQALPGDNIG 288
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_STAMF (Elongation factor 1-alpha OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=tuf PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 2.597e-33 Identity = 62/135 (45.93%), Postives = 95/135 (70.37%), Query Frame = 2 Query: 59 LAFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVE 463 + FNV+ V+ +D++RG VA + D+P A FT++V I+ HP I GY PV+ HT+ +A + E+ K+D R+GK +E+ P+F+K GDA +V+ P KP+VVE +SD+PPLGRFA+RDM +T+ +GV+ V+ Sbjct: 296 IGFNVRGVSKRDIRRGDVAGHL-DNPPTVAEEFTARVFIIWHPTAITVGYTPVIHIHTASVASRIVEIKAKLDPRTGKVVEENPQFIKMGDAAIVRFKPIKPLVVEKYSDFPPLGRFAMRDMGKTIGIGVVVDVK 429 HSP 2 Score: 31.5722 bits (70), Expect = 2.597e-33 Identity = 11/21 (52.38%), Postives = 17/21 (80.95%), Query Frame = 1 Query: 1 VKSVEMHHEALQEALPGDNVG 63 V+S+E HH +++A PGDN+G Sbjct: 277 VRSIETHHVRIEKAEPGDNIG 297
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_PYRAE (Elongation factor 1-alpha OS=Pyrobaculum aerophilum GN=tuf PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.735e-33 Identity = 60/135 (44.44%), Postives = 94/135 (69.63%), Query Frame = 2 Query: 59 LAFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVE 463 + NV+ +A +D+KRG V + P A ++++++ HP IG GYAPV+ HT+ + V+ +ELV+K+D R+G+ +E++P+F+K GD +VK+ P KP+V E FSD+PPLGRFA+RDM +T+A G I V+ Sbjct: 304 IGVNVRGIAKEDVKRGDVLGKPDNVPT-VAEEIVARIVVLWHPTAIGPGYAPVMHIHTATVPVQITELVSKLDPRTGQAVEQKPQFIKQGDVAIVKIKPLKPVVAEKFSDFPPLGRFALRDMGRTIAAGQILEVK 437 HSP 2 Score: 33.4982 bits (75), Expect = 5.735e-33 Identity = 12/22 (54.55%), Postives = 18/22 (81.82%), Query Frame = 1 Query: 1 VKSVEMHHEALQEALPGDNVGL 66 V+S+E HH L++A PGDN+G+ Sbjct: 285 VRSIETHHMKLEQAQPGDNIGV 306
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_METTP (Elongation factor 1-alpha OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=tuf PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 7.475e-33 Identity = 55/134 (41.04%), Postives = 86/134 (64.18%), Query Frame = 2 Query: 59 LAFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSV 460 + +NV+ + D++RG V + D+P A FT+Q++++ HP I GY PV CHT+ +A +E+ K+D R+G E+ P F+K GDA ++ + PTKPMV+E + P LGRFA+RDM T+A G+ ++V Sbjct: 289 IGWNVRGIGKNDIRRGDVCGHV-DNPPTVAKEFTAQIVVLQHPSAISAGYTPVFHCHTAQVACTITEIKAKLDPRTGSVKEQNPAFIKTGDAAIISVRPTKPMVIEKVKEIPQLGRFAIRDMGMTIAAGMCQNV 421 HSP 2 Score: 36.1946 bits (82), Expect = 7.475e-33 Identity = 13/21 (61.90%), Postives = 18/21 (85.71%), Query Frame = 1 Query: 1 VKSVEMHHEALQEALPGDNVG 63 VKS+E+HH+ + EA PGDN+G Sbjct: 270 VKSIEIHHQEIPEAYPGDNIG 290
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_METST (Elongation factor 1-alpha OS=Methanosphaera stadtmanae (strain DSM 3091) GN=tuf PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 9.738e-33 Identity = 58/130 (44.62%), Postives = 84/130 (64.62%), Query Frame = 2 Query: 59 LAFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGV 448 + FNV+ V D+KRG VA +++ P+ A F +Q++++ HPG + GY PV HT+ +A F L K+D +G+ E+ P FLK GDA +V + PTKPMV+E + P +GRFA+RDM QTVA G+ Sbjct: 277 VGFNVRGVGKNDIKRGDVAGTTQNPPS-VAKEFKAQIVVLQHPGVMTVGYTPVFHAHTAQVACTFLSLDVKLDPATGQPKEENPDFLKTGDAALVTIKPTKPMVIENIKEIPHMGRFAIRDMGQTVAAGM 405 HSP 2 Score: 38.5058 bits (88), Expect = 9.738e-33 Identity = 16/21 (76.19%), Postives = 18/21 (85.71%), Query Frame = 1 Query: 1 VKSVEMHHEALQEALPGDNVG 63 VKS+EMHHE L +A PGDNVG Sbjct: 258 VKSIEMHHEVLDKAEPGDNVG 278
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_PICTO (Elongation factor 1-alpha OS=Picrophilus torridus GN=tuf PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 3.647e-32 Identity = 55/136 (40.44%), Postives = 86/136 (63.24%), Query Frame = 2 Query: 59 LAFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 466 + FNV+ +A +LKRG V + + P FT+Q++++NHP I GY PV HT+ +A + E+V I+ + G L+++P F+K GD +VK++P + +V+E S++P LGRFA+RDM TVA G +EK Sbjct: 289 IGFNVRGIAKNELKRGDVCGPANNPPT-VVKGFTAQIVVLNHPSVIAAGYKPVFHVHTAQVACRIDEIVKTINPKDGTTLKEKPDFIKTGDIAIVKVVPDRALVIEKVSEFPQLGRFAIRDMGMTVAAGQCIDLEK 423 HSP 2 Score: 38.891 bits (89), Expect = 3.647e-32 Identity = 15/21 (71.43%), Postives = 19/21 (90.48%), Query Frame = 1 Query: 1 VKSVEMHHEALQEALPGDNVG 63 VKS+EMHHE +Q+A PGDN+G Sbjct: 270 VKSIEMHHEPMQQAGPGDNIG 290 The following BLAST results are available for this feature:
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 171
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623508 ID=BQ623508; Name=BQ623508; organism=Citrus sinensis; type=EST; length=649bpback to top |