BQ623508

Overview
NameBQ623508
Unique NameBQ623508
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length649
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2169 contig Csv1_Contig2169:929..1577. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_HELGL (Elongation factor 1-alpha (Fragment) OS=Helicoverpa gelotopoeon PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 2.752e-49
Identity = 74/120 (61.67%), Postives = 102/120 (85.00%), Query Frame = 2 
Query:   59 LAFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVR 418
            + FNVKNV+VK+L+RG+VA +SK++P + AA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K+DRR+GK  E  PK +K+GDA +V ++P+KP+ VE+F ++PPLGRFAVR
Sbjct:  294 VGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413

HSP 2 Score: 45.4394 bits (106), Expect = 2.752e-49
Identity = 20/21 (95.24%), Postives = 21/21 (100.00%), Query Frame = 1 
Query:    1 VKSVEMHHEALQEALPGDNVG 63
            VKSVEMHHEALQEA+PGDNVG
Sbjct:  275 VKSVEMHHEALQEAVPGDNVG 295
[Close]
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_HELDI (Elongation factor 1-alpha (Fragment) OS=Heliocheilus discalis PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 2.752e-49
Identity = 74/120 (61.67%), Postives = 102/120 (85.00%), Query Frame = 2 
Query:   59 LAFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVR 418
            + FNVKNV+VK+L+RG+VA +SK++P + AA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K+DRR+GK  E  PK +K+GDA +V ++P+KP+ VE+F ++PPLGRFAVR
Sbjct:  294 VGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413

HSP 2 Score: 45.4394 bits (106), Expect = 2.752e-49
Identity = 20/21 (95.24%), Postives = 21/21 (100.00%), Query Frame = 1 
Query:    1 VKSVEMHHEALQEALPGDNVG 63
            VKSVEMHHEALQEA+PGDNVG
Sbjct:  275 VKSVEMHHEALQEAVPGDNVG 295
[Close]
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_HELAM (Elongation factor 1-alpha (Fragment) OS=Helicoverpa armigera PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 2.752e-49
Identity = 74/120 (61.67%), Postives = 102/120 (85.00%), Query Frame = 2 
Query:   59 LAFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVR 418
            + FNVKNV+VK+L+RG+VA +SK++P + AA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K+DRR+GK  E  PK +K+GDA +V ++P+KP+ VE+F ++PPLGRFAVR
Sbjct:  294 VGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413

HSP 2 Score: 45.4394 bits (106), Expect = 2.752e-49
Identity = 20/21 (95.24%), Postives = 21/21 (100.00%), Query Frame = 1 
Query:    1 VKSVEMHHEALQEALPGDNVG 63
            VKSVEMHHEALQEA+PGDNVG
Sbjct:  275 VKSVEMHHEALQEAVPGDNVG 295
[Close]
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_HELAL (Elongation factor 1-alpha (Fragment) OS=Heliocheilus albipunctella PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 2.752e-49
Identity = 74/120 (61.67%), Postives = 102/120 (85.00%), Query Frame = 2 
Query:   59 LAFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVR 418
            + FNVKNV+VK+L+RG+VA +SK++P + AA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K+DRR+GK  E  PK +K+GDA +V ++P+KP+ VE+F ++PPLGRFAVR
Sbjct:  294 VGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413

HSP 2 Score: 45.4394 bits (106), Expect = 2.752e-49
Identity = 20/21 (95.24%), Postives = 21/21 (100.00%), Query Frame = 1 
Query:    1 VKSVEMHHEALQEALPGDNVG 63
            VKSVEMHHEALQEA+PGDNVG
Sbjct:  275 VKSVEMHHEALQEAVPGDNVG 295
[Close]
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_ANIIF (Elongation factor 1-alpha (Fragment) OS=Anicla infecta PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 2.752e-49
Identity = 74/120 (61.67%), Postives = 102/120 (85.00%), Query Frame = 2 
Query:   59 LAFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVR 418
            + FNVKNV+VK+L+RG+VA +SK++P + AA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K+DRR+GK  E  PK +K+GDA +V ++P+KP+ VE+F ++PPLGRFAVR
Sbjct:  294 VGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413

HSP 2 Score: 45.4394 bits (106), Expect = 2.752e-49
Identity = 20/21 (95.24%), Postives = 21/21 (100.00%), Query Frame = 1 
Query:    1 VKSVEMHHEALQEALPGDNVG 63
            VKSVEMHHEALQEA+PGDNVG
Sbjct:  275 VKSVEMHHEALQEAVPGDNVG 295
[Close]
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_ADIBE (Elongation factor 1-alpha (Fragment) OS=Adisura bella PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 2.752e-49
Identity = 74/120 (61.67%), Postives = 102/120 (85.00%), Query Frame = 2 
Query:   59 LAFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVR 418
            + FNVKNV+VK+L+RG+VA +SK++P + AA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K+DRR+GK  E  PK +K+GDA +V ++P+KP+ VE+F ++PPLGRFAVR
Sbjct:  294 VGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413

HSP 2 Score: 45.4394 bits (106), Expect = 2.752e-49
Identity = 20/21 (95.24%), Postives = 21/21 (100.00%), Query Frame = 1 
Query:    1 VKSVEMHHEALQEALPGDNVG 63
            VKSVEMHHEALQEA+PGDNVG
Sbjct:  275 VKSVEMHHEALQEAVPGDNVG 295
[Close]
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_BLAHO (Elongation factor 1-alpha OS=Blastocystis hominis PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 5.970e-46
Identity = 76/133 (57.14%), Postives = 105/133 (78.95%), Query Frame = 2 
Query:   59 LAFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKS 457
            + FNV NV+V+D+ RG V  ++K+DP  +  +  +QVI+MNHP  I  GY PV+DCHT+HIA KF ++++++D+R+GK L + P  +KNG + M +++P+KPM VETFSDYPPLGRFAVRDMRQTVAVG+IKS
Sbjct:  298 VGFNVNNVSVEDIHRGNVCGDAKNDPPCKTES-DAQVIVMNHPSGIRPGYCPVVDCHTAHIACKFEKIMSEMDKRTGKVLRENPDIVKNGKSMMAQLVPSKPMCVETFSDYPPLGRFAVRDMRQTVAVGIIKS 429

HSP 2 Score: 41.2022 bits (95), Expect = 5.970e-46
Identity = 17/21 (80.95%), Postives = 20/21 (95.24%), Query Frame = 1 
Query:    1 VKSVEMHHEALQEALPGDNVG 63
            VKSVEMHHE++ +ALPGDNVG
Sbjct:  279 VKSVEMHHESIPQALPGDNVG 299
[Close]
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A2_EUPCR (Elongation factor 1-alpha 2 OS=Euplotes crassus GN=EFA2 PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.373e-41
Identity = 74/140 (52.86%), Postives = 105/140 (75.00%), Query Frame = 2 
Query:   59 LAFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKDPT 478
            + FNV+ +  K++K G V  ++K+DP + A +F +QVI+MNHPG I  GY PVLD HT+H+A KF  L++K + R+GK +E+ PKFLKNG++G+V+++PTKP+ VE FS Y  LGRF +RDM++TVAVGVI+ V  K  T
Sbjct:  294 VGFNVR-LEAKEIKAGHVCGDAKNDPPKNAESFIAQVIVMNHPGHIKAGYQPVLDIHTAHVATKFKTLLSKNEARTGKLIEEAPKFLKNGESGIVELVPTKPLCVEEFSKYAALGRFVIRDMKRTVAVGVIQEVIHKKET 432

HSP 2 Score: 31.5722 bits (70), Expect = 2.373e-41
Identity = 14/21 (66.67%), Postives = 16/21 (76.19%), Query Frame = 1 
Query:    1 VKSVEMHHEALQEALPGDNVG 63
            VKS+E HH  L+EA PG NVG
Sbjct:  275 VKSLEAHHNKLEEAEPGLNVG 295
[Close]
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_THEON (Elongation factor 1-alpha OS=Thermococcus onnurineus (strain NA1) GN=tuf PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 3.005e-38
Identity = 63/140 (45.00%), Postives = 95/140 (67.86%), Query Frame = 2 
Query:   59 LAFNVKNVAVKDLKRGFVASNSKDDPA--REAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 472
            + FNV+ V   D+KRG VA ++ + P   R    F +Q+I++NHP  I  GY PVL  HT  +AV+F +L+ K+D R+G  +E+ P+F+K GD+ +V + PTKPMV+E   + P +GRFA+RDM QTVA G++ S++K +
Sbjct:  289 IGFNVRGVGKNDIKRGDVAGHTNNPPTVVRPKDTFKAQIIVLNHPTAITIGYTPVLHAHTLQVAVRFEQLLAKLDPRTGNVVEENPQFIKTGDSAIVVLRPTKPMVIEPVKEIPQMGRFAIRDMGQTVAAGMVISIQKAE 428

HSP 2 Score: 43.1282 bits (100), Expect = 3.005e-38
Identity = 17/21 (80.95%), Postives = 20/21 (95.24%), Query Frame = 1 
Query:    1 VKSVEMHHEALQEALPGDNVG 63
            VKS+EMHHE +QEALPGDN+G
Sbjct:  270 VKSIEMHHEPMQEALPGDNIG 290
[Close]
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Match: EF1A_THESM (Elongation factor 1-alpha OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=tuf PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 3.915e-38
Identity = 64/138 (46.38%), Postives = 95/138 (68.84%), Query Frame = 2 
Query:   59 LAFNVKNVAVKDLKRGFVASNSKDDPA--REAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 466
            + FNV+ V   D+KRG VA ++ + P   R    F +Q+I++NHP  I  GY PVL  HT+ +AV+F +L+ K+D R+G  +E+ P+F+K GD+ +V + PTKPMV+E   + P LGRFA+RDM QTVA G++ S++K
Sbjct:  289 IGFNVRGVGKNDIKRGDVAGHTTNPPTVVRPRDTFKAQIIVLNHPTAITIGYTPVLHAHTTQVAVRFEQLLAKLDPRTGNVVEENPQFIKTGDSAIVVLRPTKPMVIEPVKELPQLGRFAIRDMGQTVAAGMVISIQK 426

HSP 2 Score: 41.5874 bits (96), Expect = 3.915e-38
Identity = 16/21 (76.19%), Postives = 20/21 (95.24%), Query Frame = 1 
Query:    1 VKSVEMHHEALQEALPGDNVG 63
            VKS+EMHHE++ EALPGDN+G
Sbjct:  270 VKSIEMHHESMPEALPGDNIG 290
The following BLAST results are available for this feature:
BLAST of BQ623508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 171
Match NameE-valueIdentityDescription
EF1A_HELGL2.752e-4961.67Elongation factor 1-alpha (Fragment) OS=Helicoverp... [more]
EF1A_HELDI2.752e-4961.67Elongation factor 1-alpha (Fragment) OS=Heliocheil... [more]
EF1A_HELAM2.752e-4961.67Elongation factor 1-alpha (Fragment) OS=Helicoverp... [more]
EF1A_HELAL2.752e-4961.67Elongation factor 1-alpha (Fragment) OS=Heliocheil... [more]
EF1A_ANIIF2.752e-4961.67Elongation factor 1-alpha (Fragment) OS=Anicla inf... [more]
EF1A_ADIBE2.752e-4961.67Elongation factor 1-alpha (Fragment) OS=Adisura be... [more]
EF1A_BLAHO5.970e-4657.14Elongation factor 1-alpha OS=Blastocystis hominis ... [more]
EF1A2_EUPCR2.373e-4152.86Elongation factor 1-alpha 2 OS=Euplotes crassus GN... [more]
EF1A_THEON3.005e-3845.00Elongation factor 1-alpha OS=Thermococcus onnurine... [more]
EF1A_THESM3.915e-3846.38Elongation factor 1-alpha OS=Thermococcus sibiricu... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00599 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00599 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623508 ID=BQ623508; Name=BQ623508; organism=Citrus sinensis; type=EST; length=649bp
GTTAAGTCTGTTGAGATGCACCACGAAGCTCTGCAGGAGGCCCTTCCGGG
TGACAATGTTGGCCTTCAACGTGAAGAACGTTGCTGTCAAGGATCTCAAG
CGTGGTTTTGTTGCTTCCAACTCGAAGGATGATCCGGCCAGGGAAGCTGC
CAACTTCACTTCACAGGTCATCATCATGAACCATCCTGGCCAGATTGGAA
ATGGATATGCCCCAGTGCTTGACTGCCACACCTCCCACATTGCCGTCAAG
TTTTCTGAGCTCGTGACGAAGATTGATAGGCGATCAGGCAAGGAGCTTGA
GAAGGAGCCCAAGTTCTTGAAGAATGGAGATGCCGGAATGGTTAAGATGA
TTCCCACCAAGCCCATGGTTGTTGAGACATTCTCCGACTACCCACCCCTT
GGTCGTTTTGCTGTTAGGGACATGCGTCAGACTGTTGCTGTGGGTGTTAT
CAAGAGTGTTGAGAAGAAGGATCCCACAGGTGCCAAGGTCACCAAGTCCG
CAGCCAAGAAGAAATGAGAAATTTTTATGGGTCTGTCTACAATAGTTAGG
GTTTATTTTCTGGCTTTTTTATTTTCTTTTCTGGTTTTGGTTTGCATCAA
TGTTTCTGCAAACAGCCCTATTTGCTTCCACCAGTTTGCTGGTGAGCAT
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