BQ623517

Overview
NameBQ623517
Unique NameBQ623517
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length512
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623517 vs. ExPASy Swiss-Prot
Match: HBP1_CASGL (Hemoglobin-1 OS=Casuarina glauca PE=1 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 8.755e-28
Identity = 62/115 (53.91%), Postives = 75/115 (65.22%), Query Frame = 2
Query:    5 APSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIKTEMK 349
            AP +K +F+FLKDS+   E NPKLK HA  +F   CESA +LR+ G      + LK LG+ H K  + D HFEV K ALL TIKEA+ E WS E+  AW EAY+QL A IK EMK
Sbjct:   37 APESKYVFSFLKDSNEIPENNPKLKAHAAVIFKTICESATELRQKGHAVWDNNTLKRLGSIHLKNKITDPHFEVMKGALLGTIKEAIKENWSDEMGQAWTEAYNQLVATIKAEMK 151          
BLAST of BQ623517 vs. ExPASy Swiss-Prot
Match: LGB2_LUPLU (Leghemoglobin-2 OS=Lupinus luteus PE=1 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 1.183e-24
Identity = 59/115 (51.30%), Postives = 77/115 (66.96%), Query Frame = 2
Query:    2 IAPSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIKTEM 346
            IAP+AK LF+FLK +    + NP+L+ HA  VF +  E+A+QL+  G V V ++ LK+LG+ H   GVAD HF V K A+L+TIKE V   WS EL +AW  AYD+LA  IK EM
Sbjct:   37 IAPAAKDLFSFLKGTSEVPQNNPELQAHAGKVFKLVYEAAIQLQVTG-VVVTDATLKNLGSVHVSKGVADAHFPVVKEAILKTIKEVVGAKWSEELNSAWTIAYDELAIVIKKEM 150          
BLAST of BQ623517 vs. ExPASy Swiss-Prot
Match: LGB1_LUPLU (Leghemoglobin-1 OS=Lupinus luteus PE=1 SV=3)

HSP 1 Score: 112.079 bits (279), Expect = 1.545e-24
Identity = 60/116 (51.72%), Postives = 74/116 (63.79%), Query Frame = 2
Query:    2 IAPSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIKTEMK 349
            IAP AK LF+FLK S    + NP L+ HA  VF +T E+A+QL+  G V   ++ LK LG+ H   GV D HF V K A+L+TIKE V + WS EL  AW  AYD+LA  IK EMK
Sbjct:   37 IAPGAKDLFSFLKGSSEVPQNNPDLQAHAGKVFKLTYEAAIQLQVNGAVA-SDATLKSLGSVHVSKGVVDAHFPVVKEAILKTIKEVVGDKWSEELNTAWTIAYDELAIIIKKEMK 151          
BLAST of BQ623517 vs. ExPASy Swiss-Prot
Match: LGB3_PEA (Leghemoglobin Lb120-1 OS=Pisum sativum PE=2 SV=3)

HSP 1 Score: 108.997 bits (271), Expect = 1.308e-23
Identity = 62/114 (54.39%), Postives = 76/114 (66.67%), Query Frame = 2
Query:    5 APSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIKTEM 346
            AP+AK +F+FLKDS   V  +PKL+ HA  VF M  +SA+QLR +G+V V ++ L   GA H + GV D HF V K ALLETIKEA  E WS EL  AW  AY+ LA+AIK  M
Sbjct:   36 APAAKGMFSFLKDS-AEVVDSPKLQAHAEKVFGMVHDSAIQLRASGEVVVGDATL---GAIHIQKGVVDPHFVVVKEALLETIKEASGEKWSEELSTAWEVAYEGLASAIKKAM 145          
BLAST of BQ623517 vs. ExPASy Swiss-Prot
Match: LGB_CANLI (Leghemoglobin OS=Canavalia lineata PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.232e-23
Identity = 60/114 (52.63%), Postives = 75/114 (65.79%), Query Frame = 2
Query:    5 APSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIKTEM 346
            AP+A+ +F+FL +   P   NPKLK HA  VF MT +SAVQLR  G+V + +  L   G+ H + GV D HF V K ALL+T KEAV + W+ EL NAW  AYD+LAAAIK  M
Sbjct:   38 APAAQNMFSFLSNGVDP--NNPKLKAHAEKVFKMTVDSAVQLRAKGEVVLADPTL---GSVHVQKGVLDPHFLVVKEALLKTFKEAVGDKWNDELGNAWEVAYDELAAAIKKAM 146          
BLAST of BQ623517 vs. ExPASy Swiss-Prot
Match: LGB6_PEA (Leghemoglobin Lb120-34 OS=Pisum sativum PE=2 SV=3)

HSP 1 Score: 107.842 bits (268), Expect = 2.915e-23
Identity = 61/114 (53.51%), Postives = 76/114 (66.67%), Query Frame = 2
Query:    5 APSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIKTEM 346
            AP+AK +F+FLKDS   V  +PKL+ HA  VF M  +SA+QLR +G+V + ++ L   GA H + GV D HF V K ALLETIKEA  E WS EL  AW  AY+ LA+AIK  M
Sbjct:   36 APAAKGMFSFLKDS-AEVVDSPKLQAHAEKVFGMVHDSAIQLRASGEVVLGDATL---GAIHIQKGVVDPHFVVVKEALLETIKEASGEKWSEELSTAWEVAYEGLASAIKKAM 145          
BLAST of BQ623517 vs. ExPASy Swiss-Prot
Match: LGB2_SESRO (Leghemoglobin 2 OS=Sesbania rostrata GN=GLB2 PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 6.493e-23
Identity = 57/114 (50.00%), Postives = 74/114 (64.91%), Query Frame = 2
Query:    5 APSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIKTEM 346
            AP+AK +F+FLKDSD   + NP L+ HA  VF +  +SA QLR  G V + +++L   G+ H + GV D HF V K ALL+T+KEA    WS E+ NAW  AYD L+AAIK  M
Sbjct:   37 APAAKGMFSFLKDSDGVPQNNPSLQAHAEKVFGLVRDSAAQLRATGVVVLADASL---GSVHVQKGVLDPHFVVVKEALLKTLKEAAGATWSDEVSNAWEVAYDGLSAAIKKAM 147          
BLAST of BQ623517 vs. ExPASy Swiss-Prot
Match: LGB5_PEA (Leghemoglobin Lb120-29 OS=Pisum sativum PE=2 SV=3)

HSP 1 Score: 106.301 bits (264), Expect = 8.480e-23
Identity = 61/114 (53.51%), Postives = 75/114 (65.79%), Query Frame = 2
Query:    5 APSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIKTEM 346
            AP+ K +F+FLKDS   V  +PKL+ HA  VF M  +SAVQLR +G+V + ++ L   GA H + GV D HF V K ALLETIKEA  E WS EL  AW  AY+ LA+AIK  M
Sbjct:   36 APATKGMFSFLKDS-AGVVDSPKLQAHAEKVFGMVHDSAVQLRVSGEVVLGDATL---GAIHIQKGVVDSHFVVVKEALLETIKEASGEKWSEELSTAWEVAYEGLASAIKKAM 145          
BLAST of BQ623517 vs. ExPASy Swiss-Prot
Match: LGB4_MEDSA (Leghemoglobin OS=Medicago sativa GN=LB3 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 8.480e-23
Identity = 59/114 (51.75%), Postives = 77/114 (67.54%), Query Frame = 2
Query:    5 APSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIKTEM 346
            AP+AK +F+FLKDS   V+ +P+L+ HA  VF M  +SAVQLR  G+V + ++ L   G+ H + GV D HF V K ALL+TIKEAV + WS EL  +W  AYD LA+AIK  M
Sbjct:   37 APAAKGMFSFLKDS-AGVQDSPQLQAHAEKVFGMVRDSAVQLRATGEVVLGDATL---GSIHIQKGVVDPHFVVVKEALLKTIKEAVGDKWSEELSTSWEVAYDGLASAIKKAM 146          
BLAST of BQ623517 vs. ExPASy Swiss-Prot
Match: LGB2_MEDTR (Leghemoglobin 2 OS=Medicago truncatula GN=LB2 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.447e-22
Identity = 60/114 (52.63%), Postives = 74/114 (64.91%), Query Frame = 2
Query:    5 APSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIKTEM 346
            AP+AK +F+FLKD+   V+ +PKL+ HA  VF M  +SAVQLR  G V + ++ L   GA H + GV D HF V K ALL+TIKE   + WS EL  AW  AYD LAAAIK  M
Sbjct:   36 APAAKGMFSFLKDT-AGVQDSPKLQSHAEKVFGMVRDSAVQLRATGGVVLGDATL---GAIHIQKGVVDPHFVVVKEALLKTIKEVSGDKWSEELSTAWEVAYDALAAAIKKAM 145          
The following BLAST results are available for this feature:
BLAST of BQ623517 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
HBP1_CASGL8.755e-2853.91Hemoglobin-1 OS=Casuarina glauca PE=1 SV=2[more]
LGB2_LUPLU1.183e-2451.30Leghemoglobin-2 OS=Lupinus luteus PE=1 SV=2[more]
LGB1_LUPLU1.545e-2451.72Leghemoglobin-1 OS=Lupinus luteus PE=1 SV=3[more]
LGB3_PEA1.308e-2354.39Leghemoglobin Lb120-1 OS=Pisum sativum PE=2 SV=3[more]
LGB_CANLI2.232e-2352.63Leghemoglobin OS=Canavalia lineata PE=2 SV=1[more]
LGB6_PEA2.915e-2353.51Leghemoglobin Lb120-34 OS=Pisum sativum PE=2 SV=3[more]
LGB2_SESRO6.493e-2350.00Leghemoglobin 2 OS=Sesbania rostrata GN=GLB2 PE=1 ... [more]
LGB5_PEA8.480e-2353.51Leghemoglobin Lb120-29 OS=Pisum sativum PE=2 SV=3[more]
LGB4_MEDSA8.480e-2351.75Leghemoglobin OS=Medicago sativa GN=LB3 PE=2 SV=1[more]
LGB2_MEDTR1.447e-2252.63Leghemoglobin 2 OS=Medicago truncatula GN=LB2 PE=2... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00608 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00608 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623517 ID=BQ623517; Name=BQ623517; organism=Citrus sinensis; type=EST; length=512bp
GATTGCACCATCAGCAAAGAAGCTGTTCACTTTTCTCAAAGATTCAGATA
TTCCTGTGGAGCAGAATCCGAAACTAAAGCCCCATGCCACGACTGTCTTT
GTTATGACGTGTGAATCGGCAGTGCAACTTAGAAAGGCTGGCAAAGTTAC
AGTGAGAGAGTCCAATCTAAAAGACTTGGGAGCTACCCATTTCAAATACG
GAGTTGCTGATGAACATTTTGAGGTGACAAAGTATGCATTGTTGGAGACC
ATAAAGGAAGCAGTACCTGAAATGTGGTCACCAGAGTTGAAGAATGCTTG
GGCGGAGGCTTATGATCAACTGGCTGCCGCCATCAAAACTGAAATGAAGC
CTCCTTTATAATTTGCTGATTGAATGTAAAAGTGATGCTGTTTCATGGAA
AAAAATAATATTGTAAAAATGTCATGTAATCATCAATTATCGAATATTGT
GTTGATCTAATCTAAGATCCAGTTCTCTCCAACAGAGCAATCTAATGATC
ATTTGTGAGTTT
back to top