BQ623517

Overview
NameBQ623517
Unique NameBQ623517
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length512
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623517 vs. ExPASy Swiss-Prot
Match: LGB3_SESRO (Leghemoglobin 3 OS=Sesbania rostrata GN=GLB3 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 1.889e-22
Identity = 56/114 (49.12%), Postives = 74/114 (64.91%), Query Frame = 2
Query:    5 APSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIKTEM 346
            AP+AK +F+FLKD D   + NP L+ HA  VF +  +SA QLR  G V + +++L   G+ H + GV D HF V K ALL+T+KEA    WS E+ NAW  AYD+L+AAIK  M
Sbjct:   37 APAAKGMFSFLKDFDEVPQNNPSLQAHAEKVFGLVRDSAAQLRATGVVVLADASL---GSVHVQKGVLDPHFVVVKEALLKTLKEAGGATWSDEVSNAWEVAYDELSAAIKKAM 147          
BLAST of BQ623517 vs. ExPASy Swiss-Prot
Match: LGB4_PEA (Leghemoglobin Lb120-8 OS=Pisum sativum PE=2 SV=3)

HSP 1 Score: 104.76 bits (260), Expect = 2.467e-22
Identity = 60/114 (52.63%), Postives = 75/114 (65.79%), Query Frame = 2
Query:    5 APSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIKTEM 346
            AP+AK +F+FLKDS   V  +PKL+ HA  VF M  +SA+QLR +G+V + +  L   GA H + GV D HF V K ALL+TIKEA  E WS EL  AW  AY+ LA+AIK  M
Sbjct:   36 APAAKGMFSFLKDS-AEVVDSPKLQAHAEKVFGMVHDSAIQLRASGEVVLGDVTL---GAIHIQKGVIDPHFVVVKEALLDTIKEASGEKWSEELSTAWEIAYEGLASAIKKAM 145          
BLAST of BQ623517 vs. ExPASy Swiss-Prot
Match: LGB3_MEDSA (Leghemoglobin-3 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.209e-22
Identity = 59/114 (51.75%), Postives = 72/114 (63.16%), Query Frame = 2
Query:    5 APSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIKTEM 346
            AP+AK +F+FLKDS   V+ +PKL+ HA  VF M  +SA QLR  G V + ++ L   GA H + GV D HF V K ALL+TIKE   + WS EL  AW  AYD LA AIK  M
Sbjct:   36 APAAKGMFSFLKDS-AGVQDSPKLQSHAEKVFGMVRDSAAQLRATGGVVLGDATL---GAIHIQKGVVDPHFAVVKEALLKTIKEVSGDKWSEELNTAWEVAYDALATAIKKAM 145          
BLAST of BQ623517 vs. ExPASy Swiss-Prot
Match: LGB1_MEDSA (Leghemoglobin-1 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.209e-22
Identity = 59/114 (51.75%), Postives = 74/114 (64.91%), Query Frame = 2
Query:    5 APSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIKTEM 346
            AP+AK LF+FLK+S   V+ +P+L+ HA  VF +  +SAVQLR  G V + ++ L   GA H + GV D HF V K ALL+TIKEA  + WS EL  AW  AYD LA AIK  M
Sbjct:   37 APAAKGLFSFLKNS-AEVQDSPQLQAHAEKVFGLVRDSAVQLRATGGVVLGDATL---GAIHVRKGVVDPHFVVVKEALLKTIKEAAGDKWSEELNTAWEVAYDALATAIKKAM 146          
BLAST of BQ623517 vs. ExPASy Swiss-Prot
Match: LGB3_VICFA (Leghemoglobin 49 OS=Vicia faba PE=2 SV=3)

HSP 1 Score: 103.605 bits (257), Expect = 5.497e-22
Identity = 59/114 (51.75%), Postives = 74/114 (64.91%), Query Frame = 2
Query:    5 APSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIKTEM 346
            AP+AK +F+FLKDS   V  +PKL+ HA  VF M  +SA+QL+  G+V ++  +L   GA H + GV D HF V K ALL+TIKEA  + WS EL  AW  AYD LA AIK  M
Sbjct:   36 APAAKGMFSFLKDS-AGVVDSPKLQAHAEQVFGMVRDSAIQLQATGEVVLKNGSL---GAIHIQKGVVDPHFVVVKEALLKTIKEASGDKWSEELSIAWEVAYDGLATAIKKAM 145          
BLAST of BQ623517 vs. ExPASy Swiss-Prot
Match: LGB2_PEA (Leghemoglobin Lb5-10 OS=Pisum sativum PE=2 SV=3)

HSP 1 Score: 101.679 bits (252), Expect = 2.089e-21
Identity = 59/114 (51.75%), Postives = 72/114 (63.16%), Query Frame = 2
Query:    5 APSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIKTEM 346
            AP+AK LF+FLKD+   VE +PKL+ HA  VF +  +SA QLR  G+V +  + L   GA H + GV D HF V K ALL+TIK+A    WS EL  AW  AYD LA AIK  M
Sbjct:   37 APAAKGLFSFLKDT-AGVEDSPKLQAHAEQVFGLVRDSAAQLRTKGEVVLGNATL---GAIHVQRGVTDPHFVVVKEALLQTIKKASGNNWSEELNTAWEVAYDGLATAIKKAM 146          
BLAST of BQ623517 vs. ExPASy Swiss-Prot
Match: LGB1_PEA (Leghemoglobin-1 OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 2.089e-21
Identity = 59/115 (51.30%), Postives = 73/115 (63.48%), Query Frame = 2
Query:    5 APSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIKTEMK 349
            AP+AK LF+FLKD+   VE +PKL+ HA  VF +  +SA QLR  G+V +  + L   GA H + GV + HF V K ALL+TIK+A    WS EL  AW  AYD LA AIK  MK
Sbjct:   36 APAAKGLFSFLKDT-AGVEDSPKLQAHAEQVFGLVRDSAAQLRTKGEVVLGNATL---GAIHVQKGVTNPHFVVVKEALLQTIKKASGNNWSEELNTAWEVAYDGLATAIKKAMK 146          
BLAST of BQ623517 vs. ExPASy Swiss-Prot
Match: LGB1_MEDTR (Leghemoglobin 1 OS=Medicago truncatula GN=LB1 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 4.653e-21
Identity = 58/114 (50.88%), Postives = 72/114 (63.16%), Query Frame = 2
Query:    5 APSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIKTEM 346
            AP+AK LF+FLKDS   V+ +P+L+ HA  VF +  +SA QLR  G V + ++ L   GA H + GV D HF V K ALL+TIKEA  + WS EL  AW  AYD LA  IK  M
Sbjct:   37 APAAKGLFSFLKDS-AGVQDSPQLQAHAEKVFGLVRDSASQLRATGGVVLGDAAL---GAIHIQKGVVDPHFVVVKEALLKTIKEAAGDKWSEELSTAWEVAYDALATEIKKAM 146          
BLAST of BQ623517 vs. ExPASy Swiss-Prot
Match: LGB1_VICFA (Leghemoglobin-1 OS=Vicia faba PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 2.309e-20
Identity = 58/111 (52.25%), Postives = 70/111 (63.06%), Query Frame = 2
Query:    5 APSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIK 337
            AP+AK +F+FLKDS   V  +PKL  HA  VF M  +SAVQLR  G+V +   +    G+ H + GV D HF V K ALL+TIKEA  + WS EL  AW  AYD LA AIK
Sbjct:   37 APTAKAMFSFLKDS-AGVVDSPKLGAHAEKVFGMVRDSAVQLRATGEVVLDGKD----GSIHIQKGVLDPHFVVVKEALLKTIKEASGDKWSEELSAAWEVAYDGLATAIK 142          
BLAST of BQ623517 vs. ExPASy Swiss-Prot
Match: LGB_LOTJA (Leghemoglobin OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 6.719e-20
Identity = 55/116 (47.41%), Postives = 76/116 (65.52%), Query Frame = 2
Query:    2 IAPSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAV-PEMWSPELKNAWAEAYDQLAAAIKTEM 346
            IAP+AK +F+FLK+S    + +P+L+ HA  VF +T ++A QL   G+VT+ +++L   GA H +  V D HF V K ALL+T+KEAV  + WS +L  AW  AYD LA AIK  M
Sbjct:   36 IAPTAKDMFSFLKESG--PKHSPQLQAHAEKVFALTRDAATQLVAKGEVTLADASL---GAVHVQKAVTDPHFVVVKEALLQTVKEAVGADEWSDDLSTAWEGAYDGLATAIKKAM 146          
The following BLAST results are available for this feature:
BLAST of BQ623517 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
LGB3_SESRO1.889e-2249.12Leghemoglobin 3 OS=Sesbania rostrata GN=GLB3 PE=2 ... [more]
LGB4_PEA2.467e-2252.63Leghemoglobin Lb120-8 OS=Pisum sativum PE=2 SV=3[more]
LGB3_MEDSA4.209e-2251.75Leghemoglobin-3 OS=Medicago sativa PE=2 SV=1[more]
LGB1_MEDSA4.209e-2251.75Leghemoglobin-1 OS=Medicago sativa PE=2 SV=1[more]
LGB3_VICFA5.497e-2251.75Leghemoglobin 49 OS=Vicia faba PE=2 SV=3[more]
LGB2_PEA2.089e-2151.75Leghemoglobin Lb5-10 OS=Pisum sativum PE=2 SV=3[more]
LGB1_PEA2.089e-2151.30Leghemoglobin-1 OS=Pisum sativum PE=1 SV=2[more]
LGB1_MEDTR4.653e-2150.88Leghemoglobin 1 OS=Medicago truncatula GN=LB1 PE=2... [more]
LGB1_VICFA2.309e-2052.25Leghemoglobin-1 OS=Vicia faba PE=1 SV=2[more]
LGB_LOTJA6.719e-2047.41Leghemoglobin OS=Lotus japonicus PE=2 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00608 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00608 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623517 ID=BQ623517; Name=BQ623517; organism=Citrus sinensis; type=EST; length=512bp
GATTGCACCATCAGCAAAGAAGCTGTTCACTTTTCTCAAAGATTCAGATA
TTCCTGTGGAGCAGAATCCGAAACTAAAGCCCCATGCCACGACTGTCTTT
GTTATGACGTGTGAATCGGCAGTGCAACTTAGAAAGGCTGGCAAAGTTAC
AGTGAGAGAGTCCAATCTAAAAGACTTGGGAGCTACCCATTTCAAATACG
GAGTTGCTGATGAACATTTTGAGGTGACAAAGTATGCATTGTTGGAGACC
ATAAAGGAAGCAGTACCTGAAATGTGGTCACCAGAGTTGAAGAATGCTTG
GGCGGAGGCTTATGATCAACTGGCTGCCGCCATCAAAACTGAAATGAAGC
CTCCTTTATAATTTGCTGATTGAATGTAAAAGTGATGCTGTTTCATGGAA
AAAAATAATATTGTAAAAATGTCATGTAATCATCAATTATCGAATATTGT
GTTGATCTAATCTAAGATCCAGTTCTCTCCAACAGAGCAATCTAATGATC
ATTTGTGAGTTT
back to top