BQ623517

Overview
NameBQ623517
Unique NameBQ623517
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length512
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623517 vs. ExPASy Swiss-Prot
Match: LGB_PSOTE (Leghemoglobin OS=Psophocarpus tetragonolobus PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.267e-18
Identity = 54/111 (48.65%), Postives = 68/111 (61.26%), Query Frame = 2
Query:    5 APSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIK 337
            AP+AK LF FL +   P   NPKL  HA  +F +  +SA QLR  G V    +    LG+ H + GV D  F V K ALL+T+KEAV + WS EL NAW  AY++LAAA+K
Sbjct:   38 APAAKDLFPFLANGVDPT--NPKLIGHAEKLFGLVHDSAAQLRAKGAVVADAA----LGSLHAQKGVTDPQFVVVKEALLKTVKEAVGDKWSDELSNAWEVAYNELAAALK 142          
BLAST of BQ623517 vs. ExPASy Swiss-Prot
Match: LGB3_SOYBN (Leghemoglobin C3 OS=Glycine max GN=LGB1 PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 3.687e-18
Identity = 53/111 (47.75%), Postives = 69/111 (62.16%), Query Frame = 2
Query:    5 APSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIK 337
            AP AK LF+FL +   P   NPKL  HA  +F +  +SA QL+ +G V +  +    LG+ H +  + D  F V K ALL+TIKEAV + WS EL +AW  AYD+LAAAIK
Sbjct:   38 APVAKDLFSFLANGVDPT--NPKLTGHAEKLFGLVRDSAGQLKASGTVVIDAA----LGSIHAQKAITDPQFVVVKEALLKTIKEAVGDKWSDELSSAWEVAYDELAAAIK 142          
BLAST of BQ623517 vs. ExPASy Swiss-Prot
Match: LGB2_VICFA (Leghemoglobin 29 OS=Vicia faba GN=LB29 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 3.687e-18
Identity = 52/114 (45.61%), Postives = 67/114 (58.77%), Query Frame = 2
Query:    5 APSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIKTEM 346
            AP AK +F+ LKD++     NP +  H   VF M  ++A QL+  G+V + ++ L   G  H +  V   HF V K ALL+TIKEAV + WS EL NAW  AYD LA AI  EM
Sbjct:   37 APIAKNMFSVLKDANEIPLANPSINAHTEMVFEMVRDAAAQLQTTGQVVLGDTTL---GVVHTQKRVDGLHFMVVKEALLKTIKEAVGDKWSEELSNAWEIAYDGLAVAIMKEM 147          
BLAST of BQ623517 vs. ExPASy Swiss-Prot
Match: LGBA_SOYBN (Leghemoglobin A OS=Glycine max GN=LBA PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 6.289e-18
Identity = 53/111 (47.75%), Postives = 67/111 (60.36%), Query Frame = 2
Query:    5 APSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIK 337
            AP+AK LF+FL +   P   NPKL  HA  +F +  +SA QL+ +G V    +    LG+ H +  V D  F V K ALL+TIK AV + WS EL  AW  AYD+LAAAIK
Sbjct:   38 APAAKDLFSFLANGVDPT--NPKLTGHAEKLFALVRDSAGQLKASGTVVADAA----LGSVHAQKAVTDPQFVVVKEALLKTIKAAVGDKWSDELSRAWEVAYDELAAAIK 142          
BLAST of BQ623517 vs. ExPASy Swiss-Prot
Match: LGB2_SOYBN (Leghemoglobin C2 OS=Glycine max PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 6.289e-18
Identity = 53/111 (47.75%), Postives = 68/111 (61.26%), Query Frame = 2
Query:    5 APSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIK 337
            AP+AK LF+FL +   P   NPKL  HA  +F +  +SA QL+  G V    +    LG+ H +  + D  F V K ALL+TIKEAV + WS EL +AW  AYD+LAAAIK
Sbjct:   38 APAAKDLFSFLSNGVDP--SNPKLTGHAEKLFGLVRDSAGQLKANGTVVADAA----LGSIHAQKAITDPQFVVVKEALLKTIKEAVGDKWSDELSSAWEVAYDELAAAIK 142          
BLAST of BQ623517 vs. ExPASy Swiss-Prot
Match: LGB1_SOYBN (Leghemoglobin C1 OS=Glycine max PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 1.186e-16
Identity = 53/111 (47.75%), Postives = 66/111 (59.46%), Query Frame = 2
Query:    5 APSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIK 337
            AP+AK LF+FL +   P   NPKL  HA  +F +  +SA QL+  G V    +    L + H +  V D  F V K ALL+TIKEAV   WS EL +AW  AYD+LAAAIK
Sbjct:   38 APAAKDLFSFLANGVDPT--NPKLTGHAEKLFALVRDSAGQLKTNGTVVADAA----LVSIHAQKAVTDPQFVVVKEALLKTIKEAVGGNWSDELSSAWEVAYDELAAAIK 142          
BLAST of BQ623517 vs. ExPASy Swiss-Prot
Match: LGBA_PHAVU (Leghemoglobin A OS=Phaseolus vulgaris PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 1.549e-16
Identity = 50/111 (45.05%), Postives = 70/111 (63.06%), Query Frame = 2
Query:    5 APSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIK 337
            AP+AK LF+FL +   P   NPKL  HA ++F +  +SA QLR  G V    +    LG+ H + GV+++ F V K ALL+T+K+AV + W+ +L  A   AYD+LAAAIK
Sbjct:   38 APAAKNLFSFLANGVDPT--NPKLTAHAESLFGLVRDSAAQLRANGAVVADAA----LGSIHSQKGVSNDQFLVVKEALLKTLKQAVGDKWTDQLSTALELAYDELAAAIK 142          
BLAST of BQ623517 vs. ExPASy Swiss-Prot
Match: LGB2_VIGUN (Leghemoglobin-2 OS=Vigna unguiculata GN=LBII PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.311e-15
Identity = 52/111 (46.85%), Postives = 66/111 (59.46%), Query Frame = 2
Query:    5 APSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIK 337
            AP+AK LF+FL +       NPKL  HA  +F +  +SA QLR +G V    +    LGA H +  V D  F V K AL++T+KEAV + WS EL  A   AYD+LAAAIK
Sbjct:   38 APAAKNLFSFLANGVDAT--NPKLTGHAEKLFGLVRDSAAQLRASGGVVADAA----LGAVHSQKAVNDAQFVVVKEALVKTLKEAVGDKWSDELGTAVELAYDELAAAIK 142          
BLAST of BQ623517 vs. ExPASy Swiss-Prot
Match: LGB1_VIGUN (Leghemoglobin-1 OS=Vigna unguiculata GN=LBI PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.311e-15
Identity = 52/111 (46.85%), Postives = 66/111 (59.46%), Query Frame = 2
Query:    5 APSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIK 337
            AP+AK LF+FL +       NPKL  HA  +F +  +SA QLR +G V    +    LGA H +  V D  F V K AL++T+KEAV + WS EL  A   AYD+LAAAIK
Sbjct:   38 APAAKNLFSFLANGVDAT--NPKLTGHAEKLFGLVRDSAAQLRASGGVVADAA----LGAVHSQKAVNDAQFVVVKEALVKTLKEAVGDKWSDELGTAVELAYDELAAAIK 142          
BLAST of BQ623517 vs. ExPASy Swiss-Prot
Match: LGB2_PHAVU (Leghemoglobin OS=Phaseolus vulgaris PE=2 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 2.921e-15
Identity = 49/111 (44.14%), Postives = 65/111 (58.56%), Query Frame = 2
Query:    5 APSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIK 337
            AP+AK LF+FL +   P   NPKL  HA ++F +  +SA QLR  G V    +    LG+ H +  + D  F V K ALL+T+KEAV + W+ EL  A   AYD+ AA IK
Sbjct:   38 APAAKNLFSFLANGVDPT--NPKLTAHAESLFGLVRDSAAQLRANGAVVADAA----LGSIHSQKALNDSQFLVVKEALLKTLKEAVGDKWTDELSTALELAYDEFAAGIK 142          
The following BLAST results are available for this feature:
BLAST of BQ623517 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
LGB_PSOTE1.267e-1848.65Leghemoglobin OS=Psophocarpus tetragonolobus PE=2 ... [more]
LGB3_SOYBN3.687e-1847.75Leghemoglobin C3 OS=Glycine max GN=LGB1 PE=2 SV=2[more]
LGB2_VICFA3.687e-1845.61Leghemoglobin 29 OS=Vicia faba GN=LB29 PE=2 SV=1[more]
LGBA_SOYBN6.289e-1847.75Leghemoglobin A OS=Glycine max GN=LBA PE=1 SV=2[more]
LGB2_SOYBN6.289e-1847.75Leghemoglobin C2 OS=Glycine max PE=1 SV=2[more]
LGB1_SOYBN1.186e-1647.75Leghemoglobin C1 OS=Glycine max PE=2 SV=2[more]
LGBA_PHAVU1.549e-1645.05Leghemoglobin A OS=Phaseolus vulgaris PE=1 SV=2[more]
LGB2_VIGUN1.311e-1546.85Leghemoglobin-2 OS=Vigna unguiculata GN=LBII PE=1 ... [more]
LGB1_VIGUN1.311e-1546.85Leghemoglobin-1 OS=Vigna unguiculata GN=LBI PE=2 S... [more]
LGB2_PHAVU2.921e-1544.14Leghemoglobin OS=Phaseolus vulgaris PE=2 SV=3[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00608 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00608 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623517 ID=BQ623517; Name=BQ623517; organism=Citrus sinensis; type=EST; length=512bp
GATTGCACCATCAGCAAAGAAGCTGTTCACTTTTCTCAAAGATTCAGATA
TTCCTGTGGAGCAGAATCCGAAACTAAAGCCCCATGCCACGACTGTCTTT
GTTATGACGTGTGAATCGGCAGTGCAACTTAGAAAGGCTGGCAAAGTTAC
AGTGAGAGAGTCCAATCTAAAAGACTTGGGAGCTACCCATTTCAAATACG
GAGTTGCTGATGAACATTTTGAGGTGACAAAGTATGCATTGTTGGAGACC
ATAAAGGAAGCAGTACCTGAAATGTGGTCACCAGAGTTGAAGAATGCTTG
GGCGGAGGCTTATGATCAACTGGCTGCCGCCATCAAAACTGAAATGAAGC
CTCCTTTATAATTTGCTGATTGAATGTAAAAGTGATGCTGTTTCATGGAA
AAAAATAATATTGTAAAAATGTCATGTAATCATCAATTATCGAATATTGT
GTTGATCTAATCTAAGATCCAGTTCTCTCCAACAGAGCAATCTAATGATC
ATTTGTGAGTTT
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