BQ623520

Overview
NameBQ623520
Unique NameBQ623520
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length683
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13682 contig Csv1_Contig13682:68..749. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623520 vs. ExPASy Swiss-Prot
Match: PUR6_MYCTU (Phosphoribosylaminoimidazole carboxylase catalytic subunit OS=Mycobacterium tuberculosis GN=purE PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.573e-13
Identity = 37/84 (44.05%), Postives = 54/84 (64.29%), Query Frame = 2
Query:  296 DAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDRVEAHLSGVAAANSQILVI 547
            + P VG+IM SD D PVM DAA  L++F +P E++++  H+  +   SYA  A ERG+++II G    AHL G+ AA + + VI
Sbjct:    6 ERPRVGVIMGSDSDWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSYARGAAERGLEVIIAGAGGAAHLPGMVAAATPLPVI 89          
BLAST of BQ623520 vs. ExPASy Swiss-Prot
Match: PURCE_DICDI (Bifunctional purine synthesis protein purC/E OS=Dictyostelium discoideum GN=purC/E PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.258e-12
Identity = 45/134 (33.58%), Postives = 65/134 (48.51%), Query Frame = 2
Query:  134 NNSKRPNSVRTVSRGTIPVLASSNGSATSRRKDDSSVREPSTVFEEENPNGD---STDAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDRVEAHLSGVAAA 526
            +N+   N+  T    ++P + S   + T         ++ S V    N N       + P+VGIIM S  D   M  AA TL+  GVP+E +I+  H+       YA +AK RG+KI+I G    AHL G+ AA
Sbjct:  305 SNNNNNNTSSTSRSNSLPNVPSITTTPTLHHHHHHHQQQQSGVGNNNNVNSGFQVQLNQPLVGIIMGSQSDWETMKLAANTLTTLGVPFETRIVSAHRTPDRLFEYAKTAKSRGLKIVIAGAGGAAHLPGMVAA 438          
BLAST of BQ623520 vs. ExPASy Swiss-Prot
Match: PUR6_CORAM (Phosphoribosylaminoimidazole carboxylase catalytic subunit OS=Corynebacterium ammoniagenes GN=purE PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.258e-12
Identity = 36/83 (43.37%), Postives = 52/83 (62.65%), Query Frame = 2
Query:  299 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDRVEAHLSGVAAANSQILVI 547
            AP+VG+IM SD D P +  AA  L +FGVP+E+ ++  H+  ++ L YA  A  RGIK+I+      AHL G+ AA + + VI
Sbjct:    3 APLVGLIMGSDSDWPTVEPAAEVLDEFGVPFEVGVVSAHRTPEKMLDYAKQAHTRGIKVIVACAGGAAHLPGMVAAATPLPVI 85          
BLAST of BQ623520 vs. ExPASy Swiss-Prot
Match: PUR6_PICME (Phosphoribosylaminoimidazole carboxylase OS=Pichia methanolica GN=ADE1 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.255e-12
Identity = 36/86 (41.86%), Postives = 52/86 (60.47%), Query Frame = 2
Query:  290 STDAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDRVEAHLSGVAAANSQILVI 547
            ++  P+VG+IM SD DLPVM+     L  F VP+E+ I+  H+  +    YA+ A +RG+K II G    AHL G+ AA + + VI
Sbjct:  398 TSSKPLVGVIMGSDSDLPVMSLGCNILKQFNVPFEVTIVSAHRTPQRMAKYAIDAPKRGLKCIIAGAGGAAHLPGMVAAMTPLPVI 483          
BLAST of BQ623520 vs. ExPASy Swiss-Prot
Match: PUR6_VIGAC (Phosphoribosylaminoimidazole carboxylase, chloroplastic (Fragment) OS=Vigna aconitifolia GN=PURKE PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.482e-12
Identity = 35/81 (43.21%), Postives = 51/81 (62.96%), Query Frame = 2
Query:  305 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDRVEAHLSGVAAANSQILVI 547
            ++G IM SD DLPVM  AA  +  FGVP+E++I+  H+  +    YA SA ERG ++II G    AHL G+ A+ + + V+
Sbjct:  390 LLGFIMGSDSDLPVMKSAAEMMEMFGVPHEVRIVSAHRTPELMFCYASSAHERGYQVIIAGAGGAAHLPGMVASLTPLPVV 470          

HSP 2 Score: 21.557 bits (44), Expect = 5.482e-12
Identity = 9/23 (39.13%), Postives = 16/23 (69.57%), Query Frame = 3
Query:  582 NDVINSIRMPSHVQVASVPRNNA 650
            + +++ ++MP  V VA+V  NNA
Sbjct:  483 DSLLSIVQMPRGVPVATVAVNNA 505          
BLAST of BQ623520 vs. ExPASy Swiss-Prot
Match: PUR6_VIBPA (Phosphoribosylaminoimidazole carboxylase catalytic subunit OS=Vibrio parahaemolyticus GN=purE PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.479e-12
Identity = 40/80 (50.00%), Postives = 49/80 (61.25%), Query Frame = 2
Query:  308 VGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDRVEAHLSGVAAANSQILVI 547
            VGIIM S  D P M  AA  L  FGV YE K++  H+  +    YA SAKERGIK+II G    AHL G+AAA + + V+
Sbjct:    3 VGIIMGSKSDWPTMKLAADMLDQFGVSYETKVVSAHRTPQLLADYASSAKERGIKVIIAGAGGAAHLPGMAAAFTSLPVL 82          
BLAST of BQ623520 vs. ExPASy Swiss-Prot
Match: PUR6_VIBF1 (Phosphoribosylaminoimidazole carboxylase catalytic subunit OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=purE PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.112e-11
Identity = 38/80 (47.50%), Postives = 48/80 (60.00%), Query Frame = 2
Query:  308 VGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDRVEAHLSGVAAANSQILVI 547
            VGIIM S  D P M  AA  L  F VPYE K++  H+  +    YA  AK+RGIK+II G    AHL G+AAA + + V+
Sbjct:    3 VGIIMGSKSDWPTMKLAAEMLDRFNVPYETKVVSAHRTPQLLADYATQAKDRGIKVIIAGAGGAAHLPGMAAAFTSVPVL 82          
BLAST of BQ623520 vs. ExPASy Swiss-Prot
Match: PUR6_SYNY3 (Phosphoribosylaminoimidazole carboxylase catalytic subunit OS=Synechocystis sp. (strain PCC 6803) GN=purE PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.112e-11
Identity = 36/86 (41.86%), Postives = 53/86 (61.63%), Query Frame = 2
Query:  290 STDAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDRVEAHLSGVAAANSQILVI 547
            ++ +P+VGIIM SD DLP M  A     +F VP E+ I+  H+  +  + YA +A +RG++III G    AHL G+ AA + + VI
Sbjct:    2 TSPSPLVGIIMGSDSDLPTMAAAIAVCEEFAVPTEVAIISAHRTPERMVEYAQTAHQRGLRIIIAGAGGAAHLPGMVAALTPLPVI 87          
BLAST of BQ623520 vs. ExPASy Swiss-Prot
Match: PUR6_MYCLE (Phosphoribosylaminoimidazole carboxylase catalytic subunit OS=Mycobacterium leprae GN=purE PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.704e-11
Identity = 35/85 (41.18%), Postives = 51/85 (60.00%), Query Frame = 2
Query:  293 TDAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDRVEAHLSGVAAANSQILVI 547
            T  P VG+IM SD D  VM DAA  L++F +P E++++  H+   E   YA +A +R I +II G    AHL G+ A+ + + VI
Sbjct:    2 TRQPRVGVIMGSDSDWSVMQDAAHALAEFDIPIEVRVVSAHRTPAEMFDYARNAVDRSIAVIIAGAGGAAHLPGMVASATPLPVI 86          
BLAST of BQ623520 vs. ExPASy Swiss-Prot
Match: PUR6_AQUAE (Phosphoribosylaminoimidazole carboxylase catalytic subunit OS=Aquifex aeolicus GN=purE PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.704e-11
Identity = 34/82 (41.46%), Postives = 51/82 (62.20%), Query Frame = 2
Query:  302 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDRVEAHLSGVAAANSQILVI 547
            P+VG+IM S  D   M  A   L +FGVP+E+K++  H+  +    YA +A+ERGI++II G    AHL G+ A+ + + VI
Sbjct:    3 PLVGVIMGSISDWEYMKKAVEVLKEFGVPHEVKVVSAHRTPELMYEYAKTARERGIEVIIAGAGGSAHLPGMTASMTTLPVI 84          
The following BLAST results are available for this feature:
BLAST of BQ623520 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
PUR6_MYCTU8.573e-1344.05Phosphoribosylaminoimidazole carboxylase catalytic... [more]
PURCE_DICDI3.258e-1233.58Bifunctional purine synthesis protein purC/E OS=Di... [more]
PUR6_CORAM3.258e-1243.37Phosphoribosylaminoimidazole carboxylase catalytic... [more]
PUR6_PICME4.255e-1241.86Phosphoribosylaminoimidazole carboxylase OS=Pichia... [more]
PUR6_VIGAC5.482e-1243.21Phosphoribosylaminoimidazole carboxylase, chloropl... [more]
PUR6_VIBPA9.479e-1250.00Phosphoribosylaminoimidazole carboxylase catalytic... [more]
PUR6_VIBF12.112e-1147.50Phosphoribosylaminoimidazole carboxylase catalytic... [more]
PUR6_SYNY32.112e-1141.86Phosphoribosylaminoimidazole carboxylase catalytic... [more]
PUR6_MYCLE4.704e-1141.18Phosphoribosylaminoimidazole carboxylase catalytic... [more]
PUR6_AQUAE4.704e-1141.46Phosphoribosylaminoimidazole carboxylase catalytic... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00611 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00611 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623520 ID=BQ623520; Name=BQ623520; organism=Citrus sinensis; type=EST; length=683bp
GGCGGTGCTCACAATGAAGACCATTACCATTGATCTGCGAGTGCTATTTT
GTGTACTCAACAAGGTCATCGTTACTTCTTGCTTAATAGAACCGCGGCAA
AAAAAATTTGTTGAAGGAAAAGTTCGGATGTTCAATAACAGCAAGCGTCC
CAATTCGGTTCGTACTGTAAGCCGGGGCACAATTCCTGTTTTAGCCTCGT
CGAACGGCTCTGCTACTTCCAGAAGGAAGGATGATTCATCTGTCCGTGAA
CCATCAACTGTCTTCGAGGAAGAAAACCCTAATGGTGACTCTACAGATGC
CCCAATTGTTGGGATAATCATGGAATCGGATTTGGATCTTCCTGTTATGA
ATGATGCTGCGAGGACCTTGAGTGACTTCGGCGTACCTTATGAGATTAAA
ATATTACCACCTCATCAAAATTGCAAGGAGGCATTGTCTTATGCATTGTC
GGCTAAGGAGCGAGGCATTAAGATCATTATTGTTGGTGACCGTGTTGAAG
CCCATTTATCAGGTGTAGCTGCTGCAAATTCTCAAATACTTGTTATTTCG
TGTTCCTTTATTAAGTGAAGACTGGAGTGAAAATGATGTAATCAACTCAA
TTCGGATGCCAAGTCATGTCCAAGTTGCATCTGTTCCAAGAAATAATGCG
AAAATGCTGCTCTATATGCAGTAAAGGGACTTG
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