BQ623525

Overview
NameBQ623525
Unique NameBQ623525
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length695
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2449 contig Csv1_Contig2449:480..1174. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623525 vs. ExPASy Swiss-Prot
Match: GLNA_LUPLU (Glutamine synthetase nodule isozyme OS=Lupinus luteus PE=3 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.759e-69
Identity = 144/235 (61.28%), Postives = 157/235 (66.81%), Query Frame = 2
Query:    2 RHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGF*GY*ESN*ETWTEAQ*AHCRIW----*RQ*TPTHWQT*NS*HQHFQWGCC*PWGINPCWTRHRERRKGYFEDRRPAFN 694
            RHAAAKIFSH DVVAEEPW+GIEQEYTLLQKD+ WP+                   A+KA+GRDIVDSHYKACLYAGINISGIN EVMPGQWEFQVGP+VGISAGD+LWVARYILERITEIAGVVLS DPKPI GDWNGAGAH NYSTKSMRNDGG+    +   E   +    H   +     R+ T  H     S    F WG               +  KGYFEDRRPA N
Sbjct:  107 RHAAAKIFSHPDVVAEEPWFGIEQEYTLLQKDIHWPIGWPLGGFPGPQGPYYCGTGAEKAFGRDIVDSHYKACLYAGINISGINAEVMPGQWEFQVGPSVGISAGDELWVARYILERITEIAGVVLSLDPKPIPGDWNGAGAHTNYSTKSMRNDGGY-EVIKKAIEKLGKRHNEHIAAYGEGNERRLTGRHETADIS---TFFWGVANRGASIRVGRDTEKEGKGYFEDRRPASN 337          
BLAST of BQ623525 vs. ExPASy Swiss-Prot
Match: GLNA1_PHAVU (Glutamine synthetase PR-1 OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 3.001e-69
Identity = 142/235 (60.43%), Postives = 160/235 (68.09%), Query Frame = 2
Query:    2 RHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGF*GY*ESN*ETWTEAQ*AHCRIW----*RQ*TPTHWQT*NS*HQHFQWGCC*PWGINPCWTRHRERRKGYFEDRRPAFN 694
            RH AAKIFS+ DVVAEEPWYGIEQEYTLLQK+V WP+                   ADKA+GRDIVD+HYKAC+YAGINISGINGEVMPGQWEFQVGPAVGISAGD+LWVARYILERITE+AGVVLSFDPKPI+GDWNGAGAH NYSTK+MRNDGG+    +S  +   +    H   +     R+ T  H     +    F WG               +  KGYFEDRRPA N
Sbjct:  107 RHNAAKIFSNPDVVAEEPWYGIEQEYTLLQKEVNWPVGWPVGGFPGPQGPYYCGVGADKAFGRDIVDAHYKACVYAGINISGINGEVMPGQWEFQVGPAVGISAGDELWVARYILERITEVAGVVLSFDPKPIKGDWNGAGAHTNYSTKTMRNDGGYEEI-KSAIQKLGKRHKEHIAAYGEGNERRLTGRHE---TADINTFLWGVANRGASIRVGRDTEKAGKGYFEDRRPASN 337          
BLAST of BQ623525 vs. ExPASy Swiss-Prot
Match: GLN11_ORYSJ (Glutamine synthetase cytosolic isozyme 1-1 OS=Oryza sativa subsp. japonica GN=GLN1-1 PE=1 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 5.119e-69
Identity = 142/235 (60.43%), Postives = 156/235 (66.38%), Query Frame = 2
Query:    2 RHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGF*GY*ESN*ETWTEAQ*AHCRIW----*RQ*TPTHWQT*NS*HQHFQWGCC*PWGINPCWTRHRERRKGYFEDRRPAFN 694
            RH AAKIFS  +V +EEPWYGIEQEYTLLQKD+ WPL                   ADK++GRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGP+VGISAGDQ+WVARYILERITEIAGVV+SFDPKPI GDWNGAGAH NYSTKSMRNDGG+    +S  E        H   +     R+ T  H     +    F WG               +  KGYFEDRRPA N
Sbjct:  107 RHNAAKIFSSPEVASEEPWYGIEQEYTLLQKDINWPLGWPVGGFPGPQGPYYCGIGADKSFGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISAGDQVWVARYILERITEIAGVVVSFDPKPIPGDWNGAGAHTNYSTKSMRNDGGY-EIIKSAIEKLKLRHKEHISAYGEGNERRLTGRHE---TADINTFSWGVANRGASVRVGRETEQNGKGYFEDRRPASN 337          
BLAST of BQ623525 vs. ExPASy Swiss-Prot
Match: GLNA1_PEA (Glutamine synthetase nodule isozyme OS=Pisum sativum GN=GS1 PE=2 SV=2)

HSP 1 Score: 259.225 bits (661), Expect = 1.489e-68
Identity = 141/236 (59.75%), Postives = 162/236 (68.64%), Query Frame = 2
Query:    2 RHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGF*GY*ESN*ETWTEAQ*AHCRIW----*RQ*TPTHWQT*NS*HQHFQWGCC*PWGINPCWTRHRERR-KGYFEDRRPAFN 694
            RHAAAK+FSH DVVAEE WYGIEQEYTLLQKD+ WPL                   ADKA+GRD+V++HYKACL+AGINISGINGEVMPGQWEFQVGP+VGISAGD++WVARYILERITE+AGVVL+FDPKPI+GDWNGAGAH NYSTKSMR DGG+    +   E   +    H   +     R+ T  H     +    F WG     G +    R  E+  KGYFEDRRPA N
Sbjct:  106 RHAAAKVFSHPDVVAEETWYGIEQEYTLLQKDINWPLGWPAGGYPGPQGPYYCSVGADKAFGRDVVEAHYKACLFAGINISGINGEVMPGQWEFQVGPSVGISAGDEIWVARYILERITEVAGVVLTFDPKPIKGDWNGAGAHTNYSTKSMREDGGY-EIIKKAIEKLGKRLPEHISAYGEGNERRLTGKHE---TADINTFSWGVA-NRGASVRVGRDTEKEGKGYFEDRRPASN 336          
BLAST of BQ623525 vs. ExPASy Swiss-Prot
Match: GLNA_NICPL (Glutamine synthetase OS=Nicotiana plumbaginifolia PE=2 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 4.333e-68
Identity = 145/236 (61.44%), Postives = 165/236 (69.92%), Query Frame = 2
Query:    2 RHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGF*GY*ESN*ETWTEAQ*AHCRIW----*RQ*TPTHWQT*NS*HQHFQWGCC*PWGINPCWTRHRERR-KGYFEDRRPAFN 694
            RHAAAKIFS+ DVVAEEPWYGIEQEYTLLQ+D+ WPL                   ADKA+GRDIVDSHYKA LYAGINISGINGEVMPGQWEFQVGP+VGISAGD++WVARYILERI EIAGVV+SFDPKPI GDWNGAGAH NYSTKSMR DGG+    ++  +   + +  H   +     R+ T  H +T N     F+WG     G +    R  E+  KGYFEDRRPA N
Sbjct:  107 RHAAAKIFSNPDVVAEEPWYGIEQEYTLLQRDINWPLGWPIGGFPGPQGPYYCGTGADKAFGRDIVDSHYKAYLYAGINISGINGEVMPGQWEFQVGPSVGISAGDEVWVARYILERIAEIAGVVVSFDPKPIPGDWNGAGAHTNYSTKSMREDGGYEVILKAIEKLGLKHK-EHIAAYGEGNERRLTGKH-ETANI--STFKWGVA-NRGASVRVGRDTEKAGKGYFEDRRPASN 337          
BLAST of BQ623525 vs. ExPASy Swiss-Prot
Match: GLNA1_MAIZE (Glutamine synthetase root isozyme 1 OS=Zea mays GN=GLN6 PE=2 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 6.257e-67
Identity = 139/236 (58.90%), Postives = 161/236 (68.22%), Query Frame = 2
Query:    2 RHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGF*GY*ESN*ETWTEAQ*AHCRIW----*RQ*TPTHWQT*NS*HQHFQWGCC*PWGINPCWTRHRERR-KGYFEDRRPAFN 694
            R++AAK+FSH DV AE PWYGIEQEYTLLQKDV WPL                   ADKA+GRD+VD+HYKACLYAGINISGINGEVMPGQWEFQVGP+VGISAGD++WVARYILERITE+AG+VLS DPKPI+GDWNGAGAH NYSTKSMR  GG+    ++  +   +    H   +     R+ T  H     +    F+WG     G +    R  ER  KGYFEDRRPA N
Sbjct:  107 RYSAAKVFSHPDVAAEVPWYGIEQEYTLLQKDVSWPLGWPVGGYPGPQGPYYCAAGADKAFGRDVVDAHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISAGDEIWVARYILERITEMAGIVLSLDPKPIKGDWNGAGAHTNYSTKSMREAGGY-EVIKAAIDKLGKRHKEHIAAYGEGNERRLTGRHE---TADINTFKWGVA-NRGASIRVGRDTEREGKGYFEDRRPASN 337          
BLAST of BQ623525 vs. ExPASy Swiss-Prot
Match: GLNA2_PHAVU (Glutamine synthetase PR-2 OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 2.378e-66
Identity = 137/234 (58.55%), Postives = 158/234 (67.52%), Query Frame = 2
Query:    2 RHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGF*GY*ESN*E---TWTEAQ*AHCRIW*RQ*TPTHWQT*NS*HQHFQWGCC*PWGINPCWTRHRERRKGYFEDRRPAFN 694
            R+ AAKIFSH DVVAE PWYGIEQEYTLLQKDV WPL                   ADKA+GRDIVD+HYKAC+YAGINISGINGEVMPGQWEFQVGP+VGISAGD++W ARYILERITE+AG V+SFDPKPI GDWNGAGAH+NYSTKSMR +GG+    ++  +      E   A+ +   R+ T  H     +    F WG               ++ KGYFEDRRPA N
Sbjct:  107 RYDAAKIFSHPDVVAEVPWYGIEQEYTLLQKDVNWPLGWPLGGYPGPQGPYYCGVGADKAYGRDIVDAHYKACVYAGINISGINGEVMPGQWEFQVGPSVGISAGDEVWAARYILERITELAGAVVSFDPKPIPGDWNGAGAHSNYSTKSMREEGGYEVIKKAIEKLGLRHKEHIAAYGKGNERRLTGRHE---TADINTFSWGVANRGSSVRVGRDTEKQGKGYFEDRRPASN 337          
BLAST of BQ623525 vs. ExPASy Swiss-Prot
Match: GLNA5_MAIZE (Glutamine synthetase root isozyme 5 OS=Zea mays GN=GS1-5 PE=2 SV=2)

HSP 1 Score: 249.98 bits (637), Expect = 9.035e-66
Identity = 135/235 (57.45%), Postives = 154/235 (65.53%), Query Frame = 2
Query:    2 RHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGF*GY*ESN*ETWTEAQ*AHCRIW----*RQ*TPTHWQT*NS*HQHFQWGCC*PWGINPCWTRHRERRKGYFEDRRPAFN 694
            R+ AA +FSH DV AE PWYGIEQEYTLLQKD+ WPL                   ADKA+GRD+VD+HYKACLYAGINISGINGEVMPGQWEFQVGP+VGISAGD++WVARYILERITE+AG+VLS DPKPI+GDWNGAGAH NYSTKSMR  GG+    E+  E        H   +     R+ T  H     +    F+WG               +  KGYFEDRRPA N
Sbjct:  107 RYKAATVFSHPDVAAEVPWYGIEQEYTLLQKDLSWPLGWPVGGYPGPQGPYYCAAGADKAFGRDVVDAHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISAGDEIWVARYILERITEMAGIVLSLDPKPIKGDWNGAGAHTNYSTKSMREAGGYEVIKEAI-EKLGRRHREHIAAYGEGNERRLTGRHE---TADINTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASN 337          
BLAST of BQ623525 vs. ExPASy Swiss-Prot
Match: GLNA4_MAIZE (Glutamine synthetase root isozyme 4 OS=Zea mays GN=GLN5 PE=2 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 2.013e-65
Identity = 135/235 (57.45%), Postives = 158/235 (67.23%), Query Frame = 2
Query:    2 RHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGF*GY*ESN*ETWTEAQ*AHCRIW----*RQ*TPTHWQT*NS*HQHFQWGCC*PWGINPCWTRHRERRKGYFEDRRPAFN 694
            R++AAKIFS  +V AEEPWYGIEQEYTLLQKD  WPL                   A+K++GRDIVD+HYKACLYAGINISGINGEVMPGQWEFQVGP+VGIS+GDQ+WVARYILERITEIAGVV++FDPKPI GDWNGAGAH NYST+SMR +GG+    ++  E        H   +     R+ T  H     +    F WG     G +    +  +  KGYFEDRRPA N
Sbjct:  107 RYSAAKIFSSPEVAAEEPWYGIEQEYTLLQKDTNWPLGWPIGGFPGPQGPYYCGIGAEKSFGRDIVDAHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISSGDQVWVARYILERITEIAGVVVTFDPKPIPGDWNGAGAHTNYSTESMRKEGGY-EVIKAAIEKLKLRHKEHIAAYGEGNERRLTGRHE---TADINTFSWGVA-NRGASVAVGQTEQNGKGYFEDRRPASN 336          
BLAST of BQ623525 vs. ExPASy Swiss-Prot
Match: GLNA1_DAUCA (Glutamine synthetase cytosolic isozyme OS=Daucus carota GN=GLN1 PE=2 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 2.629e-65
Identity = 142/236 (60.17%), Postives = 159/236 (67.37%), Query Frame = 2
Query:   11 AAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGGF*GY*ESN*ETWTEAQ*AHCRIW-------*RQ*TPTHWQT*NS*HQHFQWGCC*PWGINPCWTRHRERR-KGYFEDRRPAFN 694
            AAKIFSH DV AE PW+GIEQEYTLL+K+V  P+                   ADKA+GRDIVD+HYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGD+LWVARYILERITEIAGVV+S DPKPI GDWNGAGAH NYSTKSMRN+GGF    E   +   + +  H +          R+ T  H     S H+ F WG     G +    R  E+  KGYFEDRRPA N
Sbjct:  109 AAKIFSHPDVAAEVPWFGIEQEYTLLKKEVNCPIGCPTGGYPGPQGPYYCGIGADKAFGRDIVDAHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDELWVARYILERITEIAGVVVSLDPKPIPGDWNGAGAHTNYSTKSMRNEGGF----EIIKKAIAKLETKHAQHIAAYGEGNERRLTGKHETA--SIHK-FSWGVA-NRGASVRVGRDTEKEGKGYFEDRRPASN 336          
The following BLAST results are available for this feature:
BLAST of BQ623525 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
GLNA_LUPLU1.759e-6961.28Glutamine synthetase nodule isozyme OS=Lupinus lut... [more]
GLNA1_PHAVU3.001e-6960.43Glutamine synthetase PR-1 OS=Phaseolus vulgaris PE... [more]
GLN11_ORYSJ5.119e-6960.43Glutamine synthetase cytosolic isozyme 1-1 OS=Oryz... [more]
GLNA1_PEA1.489e-6859.75Glutamine synthetase nodule isozyme OS=Pisum sativ... [more]
GLNA_NICPL4.333e-6861.44Glutamine synthetase OS=Nicotiana plumbaginifolia ... [more]
GLNA1_MAIZE6.257e-6758.90Glutamine synthetase root isozyme 1 OS=Zea mays GN... [more]
GLNA2_PHAVU2.378e-6658.55Glutamine synthetase PR-2 OS=Phaseolus vulgaris PE... [more]
GLNA5_MAIZE9.035e-6657.45Glutamine synthetase root isozyme 5 OS=Zea mays GN... [more]
GLNA4_MAIZE2.013e-6557.45Glutamine synthetase root isozyme 4 OS=Zea mays GN... [more]
GLNA1_DAUCA2.629e-6560.17Glutamine synthetase cytosolic isozyme OS=Daucus c... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00616 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00616 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623525 ID=BQ623525; Name=BQ623525; organism=Citrus sinensis; type=EST; length=695bp
AAGACATGCAGCTGCCAAGATTTTCAGCCATTCTGACGTTGTGGCTGAAG
AACCATGGTATGGTATTGAGCAGGAATACACCTTACTGCAGAAGGATGTT
AAATGGCCTCTTGGCTGGCCCATCGGTGGTTATCCTGGGCCTCAGGGACC
ATACTACTGTGGTGTTGGTGCTGACAAAGCTTGGGGGCGCGACATTGTAG
ACTCCCATTACAAGGCCTGTCTATATGCAGGAATCAACATCAGTGGCATC
AATGGAGAAGTCATGCCGGGGCAGTGGGAGTTCCAAGTTGGTCCCGCTGT
TGGAATTTCTGCTGGAGATCAGTTGTGGGTTGCCCGCTATATTTTAGAGA
GGATTACAGAGATTGCTGGAGTTGTGCTTTCTTTCGATCCCAAGCCAATT
CAGGGTGACTGGAATGGAGCTGGTGCTCACGCAAATTACAGCACCAAGTC
GATGAGGAACGATGGAGGCTTTTGAGGGTATTAAGAAAGCAATTGAGAAA
CTTGGACTGAGGCACAGTGAGCACATTGCCGCATATGGTGAAGGCAATGA
ACGCCGACTCACTGGCAAACATGAAACAGCTGACATCAACACTTTCAATG
GGGGTGTTGCTAACCGTGGGGCATCAATCCGTGTTGGACCAGACACAGAG
AAAGAAGGAAGGGGTACTTTGAGGACAGGAGACCTGCTTTTAACA
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