BQ623525

Overview
NameBQ623525
Unique NameBQ623525
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length695
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2449 contig Csv1_Contig2449:480..1174. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623525 vs. ExPASy Swiss-Prot
Match: GLNA_DUNSA (Glutamine synthetase (Fragment) OS=Dunaliella salina PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 3.491e-57
Identity = 70/135 (51.85%), Postives = 93/135 (68.89%), Query Frame = 2
Query:   44 AEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTK 448
            A+EPW+GIEQEYTLL    KWPL                   A ++ GRDI + HY+ CL+AGI ISG+NGEV+P QWE+QVGP  GI+ GDQ+W++RY++ R+ E+  V ++FDPKPI GDWNG+G H N+S +
Sbjct:    2 AQEPWFGIEQEYTLLNSVTKWPLGWPKGGYPAGQGPYYCSVGAGRSIGRDIPEVHYRCCLHAGIQISGVNGEVLPSQWEYQVGPVEGIAMGDQMWMSRYLMYRVAELFNVEVTFDPKPIPGDWNGSGGHVNFSNR 136          

HSP 2 Score: 79.337 bits (194), Expect = 3.491e-57
Identity = 37/52 (71.15%), Postives = 43/52 (82.69%), Query Frame = 3
Query:  483 KKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFNGGVANRGASIRVG 638
            + + +KLG RH  HIAAYGEGNERRLTGKHET+ +N F+ GVANRG SIRVG
Sbjct:  148 RSSAKKLGKRHRWHIAAYGEGNERRLTGKHETSSMNDFSWGVANRGCSIRVG 199          
BLAST of BQ623525 vs. ExPASy Swiss-Prot
Match: GLNA1_CHLRE (Glutamine synthetase cytosolic isozyme OS=Chlamydomonas reinhardtii GN=GLN1 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 4.527e-57
Identity = 77/152 (50.66%), Postives = 98/152 (64.47%), Query Frame = 2
Query:    2 RHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMR 457
            R A A++   +    EEPW+GIEQEYTLL    KWPL                   A  A GRD+ + HY+ CL AG+NISG+N EV+P QWE+QVGP  GI+ GD +W++RYI+ R+ E+  V +SFDPKPI GDWNG+G H NYSTK+ R
Sbjct:  136 RFACAEVMEKAK--KEEPWFGIEQEYTLLNAITKWPLGWPKGGYPAPQGPYYCSAGAGVAIGRDVAEVHYRLCLAAGVNISGVNAEVLPSQWEYQVGPCEGITMGDHMWMSRYIMYRVCEMFNVEVSFDPKPIPGDWNGSGGHTNYSTKATR 285          

HSP 2 Score: 75.8702 bits (185), Expect = 4.527e-57
Identity = 36/58 (62.07%), Postives = 46/58 (79.31%), Query Frame = 3
Query:  465 EAFEGIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFNGGVANRGASIRVG 638
            + ++ I++   KL  RH+ HIAAYGEGNERRLTGKHET+ ++ F+ GVANRG SIRVG
Sbjct:  289 DGWKVIQEHCAKLEARHAVHIAAYGEGNERRLTGKHETSSMSDFSWGVANRGCSIRVG 346          
BLAST of BQ623525 vs. ExPASy Swiss-Prot
Match: GLNA_NEUCR (Glutamine synthetase OS=Neurospora crassa GN=gln-1 PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 5.905e-57
Identity = 82/157 (52.23%), Postives = 102/157 (64.97%), Query Frame = 2
Query:    2 RHAAAKIF-SHSDVVAEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGG 469
            RH AAK+  +H+D V   PW+G+EQEYTLL  + + P                      K   RDIV++HYK CLYAG+ ISG N EVMP QWEFQVGP  GI  GD LW+AR++L R++E  G  +SFDPKPI GDWNGAG H N+ST++MR +GG
Sbjct:  115 RHEAAKLMEAHADQV---PWFGLEQEYTLLDINDR-PYGWPRNGFPAPQGPYYCGVGTGKVVQRDIVEAHYKCCLYAGVKISGTNAEVMPAQWEFQVGPCDGIEMGDHLWLARFLLHRVSEEFGAKVSFDPKPIPGDWNGAGLHTNFSTENMRKEGG 267          

HSP 2 Score: 76.6406 bits (187), Expect = 5.905e-57
Identity = 35/52 (67.31%), Postives = 43/52 (82.69%), Query Frame = 3
Query:  480 IKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFNGGVANRGASIRV 635
            I+ AI+KL  RH EHIA YGEGN++RLTG+HET  I++F  GVANRGASIR+
Sbjct:  271 IEDAIKKLEARHKEHIAVYGEGNDKRLTGRHETGSIDSFTYGVANRGASIRI 322          
BLAST of BQ623525 vs. ExPASy Swiss-Prot
Match: GLNA_COLGL (Glutamine synthetase OS=Colletotrichum gloeosporioides GN=GLN1 PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 5.906e-57
Identity = 83/156 (53.21%), Postives = 97/156 (62.18%), Query Frame = 2
Query:    2 RHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGG 469
            RH  AK+       A EPW+G+EQEYTLL    + P                      K   RDIVD+HYKACLY+G+ ISG N EVMP QWEFQVGP VGI  GD LW+AR++L RI E  G  +S DPKPI GDWNGAG H+N+STK MR +GG
Sbjct:  113 RHECAKLMEAH--AAHEPWFGLEQEYTLLDLSNR-PFGWPANGFPAPQGPYYCGVGTGKVVQRDIVDAHYKACLYSGVKISGTNAEVMPAQWEFQVGPCVGIEMGDHLWLARFLLARIAEEFGAKVSVDPKPIPGDWNGAGLHSNFSTKEMRVEGG 265          

HSP 2 Score: 75.485 bits (184), Expect = 5.906e-57
Identity = 36/52 (69.23%), Postives = 43/52 (82.69%), Query Frame = 3
Query:  480 IKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFNGGVANRGASIRV 635
            I+ AI+KL  RH EHIA YGEGNE+RLTG+HET  I+ F+ GVANRGASIR+
Sbjct:  269 IEAAIKKLEGRHKEHIAVYGEGNEKRLTGRHETGAIDQFSYGVANRGASIRI 320          
BLAST of BQ623525 vs. ExPASy Swiss-Prot
Match: GLNA_RAT (Glutamine synthetase OS=Rattus norvegicus GN=Glul PE=1 SV=3)

HSP 1 Score: 172.17 bits (435), Expect = 6.590e-57
Identity = 82/156 (52.56%), Postives = 103/156 (66.03%), Query Frame = 2
Query:    2 RHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGG 469
            RH+  +I     V ++ PW+G+EQEYTL+  D   P                    ADKA+GRDIV++HY+ACLYAGI I+G N EVMP QWEFQ+GP  GI  GD LWVAR+IL R+ E  GV+ +FDPKPI G+WNGAG H N+STK+MR + G
Sbjct:  114 RHSCKRIMDM--VSSQHPWFGMEQEYTLMGTDGH-PFGWPSNGFPGPQGPYYCGVGADKAYGRDIVEAHYRACLYAGIKITGTNAEVMPAQWEFQIGPCEGIRMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENG 266          

HSP 2 Score: 62.7734 bits (151), Expect = 6.590e-57
Identity = 33/56 (58.93%), Postives = 40/56 (71.43%), Query Frame = 3
Query:  480 IKKAIEKLGLRHSEHIAAY----GEGNERRLTGKHETADINTFNGGVANRGASIRV 635
            I++AI+KL  RH  HI AY    G  N RRLTG HET++IN F+ GVANR ASIR+
Sbjct:  270 IEEAIDKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGVANRSASIRI 325          

HSP 3 Score: 28.1054 bits (61), Expect = 6.590e-57
Identity = 10/15 (66.67%), Postives = 13/15 (86.67%), Query Frame = 2
Query:  650 ERRKGYFEDRRPAFN 694
            + +KGYFEDRRP+ N
Sbjct:  331 QEKKGYFEDRRPSAN 345          
BLAST of BQ623525 vs. ExPASy Swiss-Prot
Match: GLNA2_DROME (Glutamine synthetase 2 cytoplasmic OS=Drosophila melanogaster GN=Gs2 PE=2 SV=3)

HSP 1 Score: 176.022 bits (445), Expect = 7.698e-57
Identity = 84/142 (59.15%), Postives = 98/142 (69.01%), Query Frame = 2
Query:   44 AEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGG 469
            AEEPW+GIEQEYT L  D   PL                   A+K + RDIVD+HY+ACLYAGI +SG N EVMP QWEFQVGP  GIS GD LW+AR++L RI+E  G+V + DPKP+ GDWNGAGAH N STK+MR DGG
Sbjct:  132 AEEPWFGIEQEYTFLDFDGH-PLGWPKNGFPGPQGPYYCGVGANKVYARDIVDAHYRACLYAGIKVSGTNAEVMPAQWEFQVGPCEGISIGDDLWMARFLLHRISEEFGIVSTLDPKPMPGDWNGAGAHTNVSTKAMREDGG 272          

HSP 2 Score: 65.855 bits (159), Expect = 7.698e-57
Identity = 33/56 (58.93%), Postives = 39/56 (69.64%), Query Frame = 3
Query:  480 IKKAIEKLGLRHSEHIAAY----GEGNERRLTGKHETADINTFNGGVANRGASIRV 635
            I+KA+ KL   H  HI AY    G+ N RRLTGKHET+ IN F+ GVANRG SIR+
Sbjct:  276 IEKAVAKLSKCHERHIRAYDPKQGQDNARRLTGKHETSSINDFSAGVANRGCSIRI 331          
BLAST of BQ623525 vs. ExPASy Swiss-Prot
Match: GLNA_CHICK (Glutamine synthetase OS=Gallus gallus GN=GLUL PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.308e-56
Identity = 86/157 (54.78%), Postives = 105/157 (66.88%), Query Frame = 2
Query:    2 RHAAAKIFSHSDVVAEE-PWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGG 469
            RH   +I    D+V+ + PW+G+EQEYTLL  D   P                    ADKA+GRDIV++HY+ACLYAG+ I G N EVMP QWEFQVGP  GI  GD LW+AR+IL R+ E  GV++SFDPKPI G+WNGAG H N+STK+MR DGG
Sbjct:  114 RHTCRRIM---DMVSNQHPWFGMEQEYTLLGTDGH-PFGWPSNCFPGPQGPYYCGVGADKAYGRDIVEAHYRACLYAGVKIGGTNAEVMPAQWEFQVGPCEGIEMGDHLWIARFILHRVCEDFGVIVSFDPKPIPGNWNGAGCHTNFSTKNMREDGG 266          

HSP 2 Score: 63.929 bits (154), Expect = 1.308e-56
Identity = 34/56 (60.71%), Postives = 40/56 (71.43%), Query Frame = 3
Query:  480 IKKAIEKLGLRHSEHIAAY----GEGNERRLTGKHETADINTFNGGVANRGASIRV 635
            I++AIEKL  RH  HI AY    G  N RRLTG HET+ I+ F+ GVANRGASIR+
Sbjct:  270 IEEAIEKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSSIHEFSAGVANRGASIRI 325          
BLAST of BQ623525 vs. ExPASy Swiss-Prot
Match: GLNA_ASHGO (Glutamine synthetase OS=Ashbya gossypii GN=GLN1 PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 1.706e-56
Identity = 81/159 (50.94%), Postives = 100/159 (62.89%), Query Frame = 2
Query:    2 RHAAAKIFSHSDVVAEEPWYGIEQEYTLLQKDVK---WPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGG 469
            RH AAK+F      A + W+G+EQEYTL   +     WP                    A K + RD+V++HY+ACLYAG+ ISGIN EVMP QWEFQVGP  GI+ GD+LWV RY+L R+ E  GV +SF PKP++GDWNGAG H N ST+ MR  GG
Sbjct:  110 RHEAAKLFEAHR--AADIWFGLEQEYTLFDHNDNVYGWP----KGGFPAPQGPYYCGVGAGKVYARDVVEAHYRACLYAGLRISGINAEVMPSQWEFQVGPCTGITMGDELWVGRYLLHRVAEEFGVKVSFHPKPLKGDWNGAGCHTNVSTREMRQPGG 262          

HSP 2 Score: 75.485 bits (184), Expect = 1.706e-56
Identity = 36/59 (61.02%), Postives = 43/59 (72.88%), Query Frame = 3
Query:  480 IKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFNGGVANRGASIRVGPDTEKE 656
            I++AI+KL  RH EHI  YG  NE RLTG+HETA + TF+ GVANRGASIR+     KE
Sbjct:  266 IEEAIDKLSKRHKEHIKLYGSDNELRLTGRHETASMATFSSGVANRGASIRIPRSVSKE 324          
BLAST of BQ623525 vs. ExPASy Swiss-Prot
Match: GLNA_SUIBO (Glutamine synthetase OS=Suillus bovinus GN=GLNA PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.706e-56
Identity = 77/139 (55.40%), Postives = 91/139 (65.47%), Query Frame = 2
Query:   53 PWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGG 469
            PW+G+EQEYTL   D   P                      K + RD++++HY+ACLYAG+NISGIN EVMP QWEFQVGP  GIS GD LW+ARY+L RI E  G+ +SF PKP+ GDWNGAG H NYSTK MR  GG
Sbjct:  124 PWFGLEQEYTLFDADGT-PFGWPKGGFPGPQGPYYCGAGTGKVFARDLIEAHYRACLYAGVNISGINAEVMPSQWEFQVGPCEGISMGDHLWMARYLLVRIAEQWGIKVSFHPKPLAGDWNGAGCHTNYSTKVMREPGG 261          

HSP 2 Score: 75.0998 bits (183), Expect = 1.706e-56
Identity = 36/52 (69.23%), Postives = 41/52 (78.85%), Query Frame = 3
Query:  480 IKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFNGGVANRGASIRV 635
            I +AIEKL  RH+EHIA YGE N+ RLTG+HET  I  F+ GVANRGASIRV
Sbjct:  265 IDEAIEKLSKRHAEHIAVYGEDNDLRLTGRHETGHIGDFSSGVANRGASIRV 316          
BLAST of BQ623525 vs. ExPASy Swiss-Prot
Match: GLNA_DEBHA (Glutamine synthetase OS=Debaryomyces hansenii GN=GLN1 PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.462e-56
Identity = 79/157 (50.32%), Postives = 104/157 (66.24%), Query Frame = 2
Query:    2 RHAAAKIF-SHSDVVAEEPWYGIEQEYTLLQKDVKWPLXXXXXXXXXXXXXXXXXXXADKAWGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHANYSTKSMRNDGG 469
            RH +AK+  +H+D   EE W+G+EQEYTL  +    P                      K + RD++++HY+ACL+AG++ISGIN EVMP QWEFQVGP  GI  GD+LW+ARY+L+R+ E  GV +SF PKP++G+WNGAG H N STKSMR  GG
Sbjct:  110 RHESAKLMKAHAD---EEVWFGLEQEYTLFDQ-FDQPYAWPKGGFPAPQGPYYCGVGTGKVYARDLIEAHYRACLHAGVDISGINAEVMPSQWEFQVGPCEGIQMGDELWIARYLLQRVAEEFGVKVSFHPKPLKGEWNGAGCHTNVSTKSMRLPGG 262          

HSP 2 Score: 70.0922 bits (170), Expect = 2.462e-56
Identity = 32/61 (52.46%), Postives = 42/61 (68.85%), Query Frame = 3
Query:  474 EGIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFNGGVANRGASIRVGPDTEKE 656
            + I+ A+ KL  RH EH+  YG  N++RLTG+HETA I  F+ GVANRGAS+R+     KE
Sbjct:  264 KSIEVALSKLAKRHKEHMLLYGADNDQRLTGRHETASIEGFSSGVANRGASVRIPRSVAKE 324          

HSP 3 Score: 25.7942 bits (55), Expect = 2.462e-56
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 2
Query:  662 GYFEDRRPAFN 694
            GYFEDRRPA N
Sbjct:  327 GYFEDRRPASN 337          
The following BLAST results are available for this feature:
BLAST of BQ623525 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
GLNA_DUNSA3.491e-5751.85Glutamine synthetase (Fragment) OS=Dunaliella sali... [more]
GLNA1_CHLRE4.527e-5750.66Glutamine synthetase cytosolic isozyme OS=Chlamydo... [more]
GLNA_NEUCR5.905e-5752.23Glutamine synthetase OS=Neurospora crassa GN=gln-1... [more]
GLNA_COLGL5.906e-5753.21Glutamine synthetase OS=Colletotrichum gloeosporio... [more]
GLNA_RAT6.590e-5752.56Glutamine synthetase OS=Rattus norvegicus GN=Glul ... [more]
GLNA2_DROME7.698e-5759.15Glutamine synthetase 2 cytoplasmic OS=Drosophila m... [more]
GLNA_CHICK1.308e-5654.78Glutamine synthetase OS=Gallus gallus GN=GLUL PE=2... [more]
GLNA_ASHGO1.706e-5650.94Glutamine synthetase OS=Ashbya gossypii GN=GLN1 PE... [more]
GLNA_SUIBO1.706e-5655.40Glutamine synthetase OS=Suillus bovinus GN=GLNA PE... [more]
GLNA_DEBHA2.462e-5650.32Glutamine synthetase OS=Debaryomyces hansenii GN=G... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00616 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00616 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623525 ID=BQ623525; Name=BQ623525; organism=Citrus sinensis; type=EST; length=695bp
AAGACATGCAGCTGCCAAGATTTTCAGCCATTCTGACGTTGTGGCTGAAG
AACCATGGTATGGTATTGAGCAGGAATACACCTTACTGCAGAAGGATGTT
AAATGGCCTCTTGGCTGGCCCATCGGTGGTTATCCTGGGCCTCAGGGACC
ATACTACTGTGGTGTTGGTGCTGACAAAGCTTGGGGGCGCGACATTGTAG
ACTCCCATTACAAGGCCTGTCTATATGCAGGAATCAACATCAGTGGCATC
AATGGAGAAGTCATGCCGGGGCAGTGGGAGTTCCAAGTTGGTCCCGCTGT
TGGAATTTCTGCTGGAGATCAGTTGTGGGTTGCCCGCTATATTTTAGAGA
GGATTACAGAGATTGCTGGAGTTGTGCTTTCTTTCGATCCCAAGCCAATT
CAGGGTGACTGGAATGGAGCTGGTGCTCACGCAAATTACAGCACCAAGTC
GATGAGGAACGATGGAGGCTTTTGAGGGTATTAAGAAAGCAATTGAGAAA
CTTGGACTGAGGCACAGTGAGCACATTGCCGCATATGGTGAAGGCAATGA
ACGCCGACTCACTGGCAAACATGAAACAGCTGACATCAACACTTTCAATG
GGGGTGTTGCTAACCGTGGGGCATCAATCCGTGTTGGACCAGACACAGAG
AAAGAAGGAAGGGGTACTTTGAGGACAGGAGACCTGCTTTTAACA
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