BQ623531

Overview
NameBQ623531
Unique NameBQ623531
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: NEC1_NICLS (Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana sanderae GN=NECI PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 6.354e-31
Identity = 54/96 (56.25%), Postives = 63/96 (65.62%), Query Frame = 3
Query:  141 DPSPLQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            D   LQD+CVA  +  + V VNG  CK      A DF    + KPG T N+ G  VT ANVEQ+PGLNTLG+S  RIDYAP G NPPHTHPRA+E+
Sbjct:   34 DEDMLQDVCVA--DLHSKVKVNGFPCKTN--FTAADFSSLAISKPGATNNKFGSVVTTANVEQVPGLNTLGVSLARIDYAPGGINPPHTHPRASEM 125          

HSP 2 Score: 38.1206 bits (87), Expect = 6.354e-31
Identity = 18/41 (43.90%), Postives = 27/41 (65.85%), Query Frame = 2
Query:  458 LVFVTSNQLN-------NTLIAKVLNKGDVFVFPIGMIHFQ 559
            +VFV   +L+       N L++K + KG+VFVFP G++HFQ
Sbjct:  125 MVFVMEGELDVGFITTANVLVSKKIIKGEVFVFPRGLVHFQ 165          

HSP 3 Score: 37.3502 bits (85), Expect = 6.354e-31
Identity = 18/39 (46.15%), Postives = 25/39 (64.10%), Query Frame = 1
Query:  568 GKTNAVAIAALSSQFPGVITIANTGFGANPPINPDFLAR 684
            G+  A  I+A +SQ PG  +I  T FGA+PP+  D LA+
Sbjct:  169 GEVPAAVISAFNSQLPGTQSIPITLFGASPPVPDDVLAQ 207          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL24_ARATH (Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana GN=GLP10 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 9.742e-30
Identity = 54/97 (55.67%), Postives = 66/97 (68.04%), Query Frame = 3
Query:  138 FDPSPLQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            +DP  LQD+CVA  +  + + VNG  CK      A DFF +G+ KP    N +G +VT ANVE+I GLNTLG+S  RIDYAP G NPPHTHPRATE+
Sbjct:   22 YDPDTLQDLCVA--DRTSGIKVNGFTCKPESNITASDFFFAGIGKPAVVNNTVGSAVTGANVEKIAGLNTLGVSLARIDYAPGGLNPPHTHPRATEV 116          

HSP 2 Score: 39.6614 bits (91), Expect = 9.742e-30
Identity = 19/46 (41.30%), Postives = 29/46 (63.04%), Query Frame = 2
Query:  458 LVFVTSNQLN-------NTLIAKVLNKGDVFVFPIGMIHFQFTSEK 574
            ++FV   +L+       N L AK + KG+VFVFP G+IH+Q  ++K
Sbjct:  116 VIFVLEGELDVGFITTANKLFAKTVKKGEVFVFPRGLIHYQKNNDK 161          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL111_ARATH (Germin-like protein subfamily 1 member 11 OS=Arabidopsis thaliana GN=At5g38940 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.144e-28
Identity = 65/109 (59.63%), Postives = 72/109 (66.06%), Query Frame = 3
Query:  141 DPSPLQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEIPGGPGGNTLCWFL 467
            DPS LQD CV+ +   N VFVNGKFCKDPKL  A DFF SGL       + +G +VT  NV  + GLNTLGIS VRIDYA  GQNPPHTHPRATEI     G  L  F+
Sbjct:   26 DPSQLQDFCVSANTSANGVFVNGKFCKDPKLVTADDFFFSGLQTARPITSPVGSTVTAVNVNNLLGLNTLGISLVRIDYAVNGQNPPHTHPRATEILVVEQGTLLVGFV 134          

HSP 2 Score: 70.4774 bits (171), Expect = 9.811e-12
Identity = 44/85 (51.76%), Postives = 49/85 (57.65%), Query Frame = 1
Query:  430 LVVLEGTLYVGFCDIKPAE*HTHCKSSEQGRCFCVSDWHDSLPIHIGKTNAVAIAALSSQFPGVITIANTGFGANPPINPDFLAR 684
            LVV +GTL VGF    P       K   +G  F   +       +IGK  AVA AALSSQ PGVITIANT FGANP INP  LA+
Sbjct:  122 LVVEQGTLLVGFVTSNPDN-RLFSKVLNEGDVFVFPEGLIHFQANIGKAPAVAFAALSSQNPGVITIANTVFGANPAINPTILAK 205          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL11_ORYSJ (Germin-like protein 1-1 OS=Oryza sativa subsp. japonica GN=GER4 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 3.011e-28
Identity = 57/96 (59.38%), Postives = 66/96 (68.75%), Query Frame = 3
Query:  141 DPSPLQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            DP  LQD+CVA  +  + V +NG  CK      A DFF +GL  PGNT N  G +VT ANV+  PG+NTLG+S  RIDYAP GQNPPHTHPRATEI
Sbjct:   26 DPDMLQDVCVA--DLASPVKLNGFPCKAN--VTADDFFFAGLKNPGNTNNPAGSNVTAANVQSFPGVNTLGVSMARIDYAPGGQNPPHTHPRATEI 117          

HSP 2 Score: 35.8094 bits (81), Expect = 3.011e-28
Identity = 31/85 (36.47%), Postives = 37/85 (43.53%), Query Frame = 1
Query:  430 LVVLEGTLYVGFCDIKPAE*HTHCKSSEQGRCFCVSDWHDSLPIHIGKTNAVAIAALSSQFPGVITIANTGFGANPPINPDFLAR 684
            + VLEG L VGF  I  A      K+   G  F           + G   A  IAA +SQ  G   IA T F A PP+  D LA+
Sbjct:  118 IFVLEGVLEVGF--ITTAN-KLFTKTVTAGEVFVFPRGLVHFQQNRGHGPAAVIAAFNSQLQGTQAIAATLFAAAPPVPSDVLAK 199          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: RHRE_PEA (Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 3.921e-28
Identity = 54/96 (56.25%), Postives = 64/96 (66.67%), Query Frame = 3
Query:  141 DPSPLQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            D   LQD+CVA  +  + + VNG  CK      A+DFF + L K G T N  G  VT ANV++IPGLNTLG+S  RIDYAP G NPPHTHPRATE+
Sbjct:   22 DADALQDLCVA--DYASVILVNGFACKPASNVTAEDFFSNLLVKQGATNNTFGSLVTGANVQRIPGLNTLGVSMARIDYAPGGLNPPHTHPRATEM 115          

HSP 2 Score: 40.0466 bits (92), Expect = 3.921e-28
Identity = 20/41 (48.78%), Postives = 26/41 (63.41%), Query Frame = 2
Query:  458 LVFVTSNQLN-------NTLIAKVLNKGDVFVFPIGMIHFQ 559
            +VFV   QL+       N LIAK + KG+ FVFP G++HFQ
Sbjct:  115 MVFVLEGQLDVGFITTTNQLIAKTIAKGETFVFPKGLVHFQ 155          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL22_ARATH (Germin-like protein subfamily 2 member 2 OS=Arabidopsis thaliana GN=At1g02335 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 4.210e-27
Identity = 51/97 (52.58%), Postives = 65/97 (67.01%), Query Frame = 3
Query:  138 FDPSPLQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            +DP  LQD+CVA  +  +   +NG  CK+       DFF +G+ KP    + +G +VT ANVE+IPGLNTL +S  RIDYAP G NPPHTHPRATE+
Sbjct:   23 YDPDALQDLCVA--DKSHGTKLNGFPCKETLNITESDFFFAGISKPAVINSTMGSAVTGANVEKIPGLNTLSVSLARIDYAPGGLNPPHTHPRATEV 117          

HSP 2 Score: 35.4242 bits (80), Expect = 4.210e-27
Identity = 28/83 (33.73%), Postives = 39/83 (46.99%), Query Frame = 1
Query:  436 VLEGTLYVGFCDIKPAE*HTHCKSSEQGRCFCVSDWHDSLPIHIGKTNAVAIAALSSQFPGVITIANTGFGANPPINPDFLAR 684
            VLEG L VGF  I  A      K+ + G  F           + GK+ A  ++A +SQ PG  ++A T F A P +  D L +
Sbjct:  120 VLEGELEVGF--ITTAN-KLFTKTIKIGEVFVFPRGLVHFQKNNGKSPASVLSAFNSQLPGTASVAATLFAAEPALPEDVLTK 199          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL52_ORYSJ (Germin-like protein 5-1 OS=Oryza sativa subsp. japonica GN=Os05g0277500 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.210e-27
Identity = 57/96 (59.38%), Postives = 64/96 (66.67%), Query Frame = 3
Query:  141 DPSPLQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            DP  LQDICVA  +  +AV VNG  CK        DF+  GL   GNT N  G  VT ANVE++PGLNTLG+S  RIDYAP G NPPHTHPRATE+
Sbjct:   27 DPDLLQDICVA--DLTSAVKVNGFACK--AAVTEDDFYFKGLAAAGNTNNTYGSVVTGANVEKLPGLNTLGVSMSRIDYAPGGLNPPHTHPRATEM 118          

HSP 2 Score: 35.8094 bits (81), Expect = 4.210e-27
Identity = 18/41 (43.90%), Postives = 24/41 (58.54%), Query Frame = 2
Query:  458 LVFVTSNQLN-------NTLIAKVLNKGDVFVFPIGMIHFQ 559
            +VFV    L+       N L  K ++ GDVFVFP G++HFQ
Sbjct:  118 MVFVLQGTLDVGFITTANKLYTKTISAGDVFVFPRGLLHFQ 158          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL25_ARATH (Probable germin-like protein subfamily 2 member 5 OS=Arabidopsis thaliana GN=At5g26700 PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 4.213e-27
Identity = 52/92 (56.52%), Postives = 60/92 (65.22%), Query Frame = 3
Query:  153 LQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            LQD+CVA  +  NAV VNG  CKD      +DF+  GL     T    G  VT ANVE++PGLNTLG+S  RIDYAP G NPPH HPRA+EI
Sbjct:   25 LQDVCVA--DLSNAVKVNGYTCKDSTQITPEDFYFKGLANIAATNTSTGSVVTGANVEKLPGLNTLGLSMSRIDYAPNGLNPPHVHPRASEI 114          

HSP 2 Score: 40.817 bits (94), Expect = 4.213e-27
Identity = 22/41 (53.66%), Postives = 25/41 (60.98%), Query Frame = 2
Query:  458 LVFVTSNQLN-------NTLIAKVLNKGDVFVFPIGMIHFQ 559
            ++FV   QL          LIAK LNKGDVF FP G+IHFQ
Sbjct:  114 IIFVLEGQLYVGFVTTAGKLIAKNLNKGDVFTFPKGLIHFQ 154          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL23_ARATH (Germin-like protein subfamily 2 member 3 OS=Arabidopsis thaliana GN=GLP8 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.480e-27
Identity = 53/96 (55.21%), Postives = 64/96 (66.67%), Query Frame = 3
Query:  141 DPSPLQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSGLDKPGNTANR-LGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATE 425
            D + LQD CVA  +  N + VNG  CKDP     +DF+  GL     TAN  +G +VT ANVE++PGLNTLG+S  RIDYAP G NPPH HPRA+E
Sbjct:   23 DTNMLQDFCVA--DLSNGLKVNGYPCKDPAKVTPEDFYFIGLATAAATANSSMGSAVTGANVEKVPGLNTLGVSISRIDYAPGGLNPPHLHPRASE 116          

HSP 2 Score: 39.6614 bits (91), Expect = 5.480e-27
Identity = 28/86 (32.56%), Postives = 38/86 (44.19%), Query Frame = 1
Query:  427 SLVVLEGTLYVGFCDIKPAE*HTHCKSSEQGRCFCVSDWHDSLPIHIGKTNAVAIAALSSQFPGVITIANTGFGANPPINPDFLAR 684
            ++ VLEG L+VGF          H     +G  F           +  K  A  +AA  SQ PG   +  + FG+NPPI  D LA+
Sbjct:  117 AIFVLEGRLFVGFLTTTGKLISKHVN---KGDVFVFPKALLHFQQNPNKAPASVLAAFDSQLPGTQVVGPSLFGSNPPIPDDLLAK 199          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: NEC1_NICPL (Nectarin-1 OS=Nicotiana plumbaginifolia GN=NEC1 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.572e-26
Identity = 54/96 (56.25%), Postives = 63/96 (65.62%), Query Frame = 3
Query:  141 DPSPLQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            D   LQD+CVA  +  + V VNG  CK      A DF    + KPG T N+ G  VT ANVEQ+PGLNTLG+S  RIDYAP G NPPHTHPRA+E+
Sbjct:   34 DEDMLQDVCVA--DLHSKVKVNGFPCKTN--FTAADFSSFAISKPGATNNKFGSKVTTANVEQVPGLNTLGVSLARIDYAPGGINPPHTHPRASEM 125          

HSP 2 Score: 39.6614 bits (91), Expect = 1.572e-26
Identity = 19/46 (41.30%), Postives = 29/46 (63.04%), Query Frame = 2
Query:  458 LVFVTSNQLN-------NTLIAKVLNKGDVFVFPIGMIHFQFTSEK 574
            +VFV   +L+       N L++K + KG+VFVFP G++HFQ  + K
Sbjct:  125 MVFVMEGELDVGFITTANVLVSKQITKGEVFVFPRGLVHFQKNNGK 170          
The following BLAST results are available for this feature:
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
NEC1_NICLS6.354e-3156.25Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana s... [more]
GL24_ARATH9.742e-3055.67Germin-like protein subfamily 2 member 4 OS=Arabid... [more]
GL111_ARATH1.144e-2859.63Germin-like protein subfamily 1 member 11 OS=Arabi... [more]
GL11_ORYSJ3.011e-2859.38Germin-like protein 1-1 OS=Oryza sativa subsp. jap... [more]
RHRE_PEA3.921e-2856.25Rhicadhesin receptor OS=Pisum sativum GN=GER1 PE=1... [more]
GL22_ARATH4.210e-2752.58Germin-like protein subfamily 2 member 2 OS=Arabid... [more]
GL52_ORYSJ4.210e-2759.38Germin-like protein 5-1 OS=Oryza sativa subsp. jap... [more]
GL25_ARATH4.213e-2756.52Probable germin-like protein subfamily 2 member 5 ... [more]
GL23_ARATH5.480e-2755.21Germin-like protein subfamily 2 member 3 OS=Arabid... [more]
NEC1_NICPL1.572e-2656.25Nectarin-1 OS=Nicotiana plumbaginifolia GN=NEC1 PE... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00622 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00622 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623531 ID=BQ623531; Name=BQ623531; organism=Citrus sinensis; type=EST; length=693bp
AATAAGTTCAGAAATTGATTAAACAGAGTGAGATCCTACAGCTAGCTAGC
TAGCTAATTAAACACACAATGAAAACCAGTGTTCAATTTCTTAAAGGTTT
TGCTCTCTTGGTTTTAGCTTCTTCGTTGGCCTCTGCCTTTGATCCTAGTC
CTCTTCAGGATATCTGTGTAGCCATCGATGAGCCCAAGAACGCAGTTTTT
GTTAACGGGAAGTTCTGCAAGGACCCCAAGCTTGCTAAAGCTCAAGATTT
CTTCTTATCAGGGCTAGACAAGCCTGGAAACACAGCAAACCGTCTTGGTT
TTAGTGTGACAAATGCAAATGTTGAGCAAATTCCAGGACTCAACACCCTT
GGCATATCAGCAGTCCGTATTGACTATGCACCATACGGCCAAAACCCACC
TCACACGCACCCTCGTGCCACTGAGATCCCTGGTGGTCCTGGAGGGAACA
CTTTATGTTGGTTTTTGTGACATCAAACCAGCTGAATAACACACTCATTG
CAAAAGTTCTGAACAAGGGAGATGTTTTTGTGTTTCCGATTGGCATGATT
CACTTCCAATTCACATCGGAAAAACAAATGCAGTTGCAATTGCTGCTCTA
AGCAGCCAGTTCCCTGGTGTCATTACCATAGCAAACACGGGCTTCGGAGC
CAATCCTCCGATCAATCCTGATTTTCTTGCCAGGCGTCCAGTT
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