BQ623531

Overview
NameBQ623531
Unique NameBQ623531
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL36_ORYSJ (Germin-like protein 3-6 OS=Oryza sativa subsp. japonica GN=Os03g0694000 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.487e-23
Identity = 47/97 (48.45%), Postives = 59/97 (60.82%), Query Frame = 3
Query:  141 DPSPLQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSGLDKPGNT-ANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            D  PLQD CVA  + K  V VNG  CK    A  +  F S +   G+  AN  G +VT  +V + PG+NTLG+S  R+D+AP G NPPH HPRATE+
Sbjct:   30 DADPLQDFCVADLDSK--VTVNGHACKPASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGGTNPPHVHPRATEV 124          

HSP 2 Score: 45.0542 bits (105), Expect = 1.487e-23
Identity = 25/84 (29.76%), Postives = 38/84 (45.24%), Query Frame = 1
Query:  433 VVLEGTLYVGFCDIKPAE*HTHCKSSEQGRCFCVSDWHDSLPIHIGKTNAVAIAALSSQFPGVITIANTGFGANPPINPDFLAR 684
            +VL G L VG           + K    G  F +         ++GKT A  + + +SQ PG++ +  T FG+NPPI    L +
Sbjct:  126 IVLRGELLVGIIGTLDTGNRYYSKVVRAGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVK 209          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL35_ORYSJ (Germin-like protein 3-5 OS=Oryza sativa subsp. japonica GN=Os03g0693900 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.487e-23
Identity = 46/97 (47.42%), Postives = 59/97 (60.82%), Query Frame = 3
Query:  141 DPSPLQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSGLDKPGNT-ANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            D  PLQD CVA  +  + V VNG  CK    A  +  F S +   G+  AN  G +VT  +V + PG+NTLG+S  R+D+AP G NPPH HPRATE+
Sbjct:   28 DADPLQDFCVA--DLNSEVTVNGHACKPASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGGTNPPHVHPRATEV 122          

HSP 2 Score: 45.0542 bits (105), Expect = 1.487e-23
Identity = 25/84 (29.76%), Postives = 38/84 (45.24%), Query Frame = 1
Query:  433 VVLEGTLYVGFCDIKPAE*HTHCKSSEQGRCFCVSDWHDSLPIHIGKTNAVAIAALSSQFPGVITIANTGFGANPPINPDFLAR 684
            +VL G L VG           + K    G  F +         ++GKT A  + + +SQ PG++ +  T FG+NPPI    L +
Sbjct:  124 IVLRGELLVGIIGTLDTGNRYYSKVVRAGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVK 207          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL34_ORYSJ (Putative germin-like protein 3-4 OS=Oryza sativa subsp. japonica GN=Os03g0693800 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.934e-23
Identity = 47/97 (48.45%), Postives = 59/97 (60.82%), Query Frame = 3
Query:  141 DPSPLQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSGLDKPGNT-ANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            D  PLQD CVA  + K  V VNG  CK    A  +  F S +   G+  AN  G +VT  +V + PG+NTLG+S  R+D+AP G NPPH HPRATE+
Sbjct:   30 DADPLQDFCVADLDSK--VTVNGHACKPASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGGTNPPHVHPRATEV 124          

HSP 2 Score: 44.669 bits (104), Expect = 1.934e-23
Identity = 25/84 (29.76%), Postives = 38/84 (45.24%), Query Frame = 1
Query:  433 VVLEGTLYVGFCDIKPAE*HTHCKSSEQGRCFCVSDWHDSLPIHIGKTNAVAIAALSSQFPGVITIANTGFGANPPINPDFLAR 684
            +VL G L VG           + K    G  F +         ++GKT A  + + +SQ PG++ +  T FG+NPPI    L +
Sbjct:  126 IVLRGELLVGIIGTLDMGNRYYSKVVRAGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVK 209          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL38_ORYSJ (Germin-like protein 3-8 OS=Oryza sativa subsp. japonica GN=Os03g0804700 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.935e-23
Identity = 53/115 (46.09%), Postives = 64/115 (55.65%), Query Frame = 3
Query:  141 DPSPLQDICVAI-----DEPKNAVFVNGKF-CKDPKLAKAQDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEIPGGPGGNTLCWFL 467
            DP P+QD CVA+     D    A      F CK      + DFF +GL    +T NR GF+VT AN E  PGLNTLG+S  R+D AP G NP H+HPRATE+     G  L  F+
Sbjct:   26 DPEPVQDFCVAVVPRAGDAAAAACPAYPGFPCKPASTVVSDDFFFAGLAVASDTDNRFGFNVTAANAETFPGLNTLGVSIGRVDLAPGGVNPLHSHPRATELIHVVAGRVLAGFV 140          

HSP 2 Score: 34.6538 bits (78), Expect = 1.935e-23
Identity = 19/57 (33.33%), Postives = 28/57 (49.12%), Query Frame = 1
Query:  514 QGRCFCVSDWHDSLPIHIGKTNAVAIAALSSQFPGVITIANTGFGANPPINPDFLAR 684
            +G  F V         ++G   A  I A +SQ PGV+   +T FG++P I    LA+
Sbjct:  153 EGETFVVPRGMIHFQYNVGGVAAQVITAFNSQMPGVVAAGSTLFGSDPEIPDAVLAK 209          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL33_ORYSJ (Germin-like protein 3-3 OS=Oryza sativa subsp. japonica GN=Os03g0693700 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.219e-23
Identity = 48/97 (49.48%), Postives = 59/97 (60.82%), Query Frame = 3
Query:  141 DPSPLQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSGLDKPGNT-ANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            DP PLQD CVA  +  + V +NG  CK    A  +  F S L   G+  AN  G +VT  +V   PG+NTLG+S  RID+AP G NPPH HPRATE+
Sbjct:   28 DPDPLQDFCVA--DLDSEVTLNGYPCKPTPAAGDEFLFSSRLATGGDVNANPNGSNVTQLDVAGWPGVNTLGVSMNRIDFAPGGTNPPHVHPRATEV 122          

HSP 2 Score: 43.1282 bits (100), Expect = 7.219e-23
Identity = 24/84 (28.57%), Postives = 38/84 (45.24%), Query Frame = 1
Query:  433 VVLEGTLYVGFCDIKPAE*HTHCKSSEQGRCFCVSDWHDSLPIHIGKTNAVAIAALSSQFPGVITIANTGFGANPPINPDFLAR 684
            +VL G L VG           + +    G  F +         ++GKT A  + + +SQ PG++ +  T FG+NPPI    L +
Sbjct:  124 IVLRGELLVGIIGSLDTGNRYYSRVVRGGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVK 207          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL11_ARATH (Germin-like protein subfamily 1 member 1 OS=Arabidopsis thaliana GN=GLP7 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 1.073e-20
Identity = 44/98 (44.90%), Postives = 59/98 (60.20%), Query Frame = 3
Query:  141 DPSPLQDICVAIDEPKNA-VFVNGKFCKDPKLAKAQDFFLSGLDKPGNTANR-LGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            DP PLQD CV+     +  +F+NGK CKDP  A   DF  S L +PGNT  +    +VT      +PGLNT+G++  R+D+   G  PPH HPRA+E+
Sbjct:   19 DPDPLQDYCVSPPPSSHQQIFLNGKLCKDPTQASVSDFSTSALSRPGNTKTKPFMINVTVTTTANLPGLNTVGLTMARLDFGGSGVVPPHVHPRASEV 116          

HSP 2 Score: 27.7202 bits (60), Expect = 1.073e-20
Identity = 22/77 (28.57%), Postives = 34/77 (44.16%), Query Frame = 1
Query:  433 VVLEGTLYVGFCDIKPAE*HTHCKSSEQGRCFCVSDWHDSLPIHIGK-TNAVAIAALSSQFPGVITIANTGFGANPP 660
            V L+G L VGF D          +    G  F           +I   ++A+A++ LSSQ PG   ++ + F + PP
Sbjct:  118 VCLDGVLLVGFVDTSG---RVFTQELHPGETFVFPKGLIHFLYNIDTVSSALAVSGLSSQNPGTQIVSLSSFISKPP 191          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL32_ARATH (Germin-like protein subfamily 3 member 2 OS=Arabidopsis thaliana GN=At3g10080 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 2.056e-18
Identity = 44/101 (43.56%), Postives = 53/101 (52.48%), Query Frame = 3
Query:  141 DPSPLQDICVAIDEPKNAVFVNGKF-----CKDPKLAKAQDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            DP P+QD C  I +P  + + +  F     CK+      +DF  SGL   GN     GF+      E  PGLNTLGIS VR D  P   NPPH HPRATE+
Sbjct:   26 DPDPIQDFC--IPKPVTSPYHDHHFSTNLPCKNSSEVTTEDFVFSGLKTAGNFTET-GFATVPVGPENFPGLNTLGISFVRADLKPGSINPPHYHPRATEV 123          

HSP 2 Score: 34.2686 bits (77), Expect = 2.056e-18
Identity = 12/25 (48.00%), Postives = 20/25 (80.00%), Query Frame = 2
Query:  485 NNTLIAKVLNKGDVFVFPIGMIHFQ 559
            NN + AKV+ +G++ V+P G++HFQ
Sbjct:  139 NNKVYAKVMEEGEMMVYPKGLVHFQ 163          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL111_ORYSJ (Germin-like protein 11-1 OS=Oryza sativa subsp. japonica GN=Os11g0537300 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.879e-18
Identity = 42/108 (38.89%), Postives = 56/108 (51.85%), Query Frame = 3
Query:  141 DPSPLQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEIPGGPGGNTLCWF 464
            D  PLQD+C    + +  +F+NG FCK P    A DF    L+  G+  N +  S       + PGLNTLGIS  R D A  G   PH+HPRA+E+     G+ +  F
Sbjct:   24 DSPPLQDVCPMAPQGERKLFMNGFFCKSPSTIMASDFKTLLLNHAGDLDNMVRSSANIITATEFPGLNTLGISMARTDIAVSGAVLPHSHPRASEMMFVHSGSVVAGF 131          

HSP 2 Score: 31.9574 bits (71), Expect = 5.879e-18
Identity = 12/21 (57.14%), Postives = 16/21 (76.19%), Query Frame = 2
Query:  494 LIAKVLNKGDVFVFPIGMIHF 556
            L  K L +GDVF+FP G++HF
Sbjct:  138 LFQKTLAEGDVFIFPRGLVHF 158          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL34_ARATH (Germin-like protein subfamily 3 member 4 OS=Arabidopsis thaliana GN=At5g61750 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 9.959e-18
Identity = 38/96 (39.58%), Postives = 53/96 (55.21%), Query Frame = 3
Query:  141 DPSPLQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            D   +QD C      ++  F+NG  CK+P    AQDF  + L + G+T N L  +VT     + PGLNTLG+S  R D    G  P H+HPR++E+
Sbjct:   19 DSDNMQDTCPTAPGEQSIFFINGYPCKNPTKITAQDFKSTKLTEAGDTDNYLQSNVTLLTALEFPGLNTLGLSVSRTDLERDGSVPFHSHPRSSEM 114          

HSP 2 Score: 38.1206 bits (87), Expect = 9.959e-18
Identity = 17/33 (51.52%), Postives = 21/33 (63.64%), Query Frame = 2
Query:  458 LVFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHF 556
            +VF      NN +   VL KGDVFVFP G++HF
Sbjct:  121 VVFAGFVDTNNKIFQTVLQKGDVFVFPKGLLHF 153          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL31_ARATH (Germin-like protein subfamily 3 member 1 OS=Arabidopsis thaliana GN=GLP1 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.295e-17
Identity = 45/92 (48.91%), Postives = 52/92 (56.52%), Query Frame = 3
Query:  153 LQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            +QD CVA    K A    G  C  P   KA DF  SGL  PGNT N +  +VT A   Q PGLN LG+S  R+D AP G  P HTHP A+E+
Sbjct:   19 VQDFCVA--NLKRAETPAGYPCIRPIHVKATDFVFSGLGTPGNTTNIINAAVTPAFAAQFPGLNGLGLSTARLDLAPKGVIPMHTHPGASEV 108          

HSP 2 Score: 30.4166 bits (67), Expect = 1.295e-17
Identity = 12/29 (41.38%), Postives = 17/29 (58.62%), Query Frame = 2
Query:  488 NTLIAKVLNKGDVFVFPIGMIHFQFTSEK 574
            N +  + L  G V VFP G++HFQ  + K
Sbjct:  125 NAVYVQTLKPGQVMVFPQGLLHFQINAGK 153          
The following BLAST results are available for this feature:
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
GL36_ORYSJ1.487e-2348.45Germin-like protein 3-6 OS=Oryza sativa subsp. jap... [more]
GL35_ORYSJ1.487e-2347.42Germin-like protein 3-5 OS=Oryza sativa subsp. jap... [more]
GL34_ORYSJ1.934e-2348.45Putative germin-like protein 3-4 OS=Oryza sativa s... [more]
GL38_ORYSJ1.935e-2346.09Germin-like protein 3-8 OS=Oryza sativa subsp. jap... [more]
GL33_ORYSJ7.219e-2349.48Germin-like protein 3-3 OS=Oryza sativa subsp. jap... [more]
GL11_ARATH1.073e-2044.90Germin-like protein subfamily 1 member 1 OS=Arabid... [more]
GL32_ARATH2.056e-1843.56Germin-like protein subfamily 3 member 2 OS=Arabid... [more]
GL111_ORYSJ5.879e-1838.89Germin-like protein 11-1 OS=Oryza sativa subsp. ja... [more]
GL34_ARATH9.959e-1839.58Germin-like protein subfamily 3 member 4 OS=Arabid... [more]
GL31_ARATH1.295e-1748.91Germin-like protein subfamily 3 member 1 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00622 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00622 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623531 ID=BQ623531; Name=BQ623531; organism=Citrus sinensis; type=EST; length=693bp
AATAAGTTCAGAAATTGATTAAACAGAGTGAGATCCTACAGCTAGCTAGC
TAGCTAATTAAACACACAATGAAAACCAGTGTTCAATTTCTTAAAGGTTT
TGCTCTCTTGGTTTTAGCTTCTTCGTTGGCCTCTGCCTTTGATCCTAGTC
CTCTTCAGGATATCTGTGTAGCCATCGATGAGCCCAAGAACGCAGTTTTT
GTTAACGGGAAGTTCTGCAAGGACCCCAAGCTTGCTAAAGCTCAAGATTT
CTTCTTATCAGGGCTAGACAAGCCTGGAAACACAGCAAACCGTCTTGGTT
TTAGTGTGACAAATGCAAATGTTGAGCAAATTCCAGGACTCAACACCCTT
GGCATATCAGCAGTCCGTATTGACTATGCACCATACGGCCAAAACCCACC
TCACACGCACCCTCGTGCCACTGAGATCCCTGGTGGTCCTGGAGGGAACA
CTTTATGTTGGTTTTTGTGACATCAAACCAGCTGAATAACACACTCATTG
CAAAAGTTCTGAACAAGGGAGATGTTTTTGTGTTTCCGATTGGCATGATT
CACTTCCAATTCACATCGGAAAAACAAATGCAGTTGCAATTGCTGCTCTA
AGCAGCCAGTTCCCTGGTGTCATTACCATAGCAAACACGGGCTTCGGAGC
CAATCCTCCGATCAATCCTGATTTTCTTGCCAGGCGTCCAGTT
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