BQ623531

Overview
NameBQ623531
Unique NameBQ623531
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GLT3_ARATH (Germin-like protein subfamily T member 3 OS=Arabidopsis thaliana GN=At1g74820 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.184e-17
Identity = 47/109 (43.12%), Postives = 59/109 (54.13%), Query Frame = 3
Query:  147 SPLQDICVAIDE--PKNAVFVNGKFCKDPKLAKAQDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEIPGGPGGNTLCWFL 467
            +P QD CVA  +  P N+    G  CK      ++DFF SGL+ P NT+N  G +   AN+   PGLNTLGIS   +  AP G N PH+HP  TE      G+ L  FL
Sbjct:   38 NPFQDFCVADLQATPTNS----GYPCKSQ--VTSEDFFYSGLNTPLNTSNPKGIAANPANLLTFPGLNTLGISMYNVAIAPGGYNQPHSHPGVTEAGVVIEGSVLVGFL 140          

HSP 2 Score: 33.4982 bits (75), Expect = 2.184e-17
Identity = 13/25 (52.00%), Postives = 19/25 (76.00%), Query Frame = 2
Query:  485 NNTLIAKVLNKGDVFVFPIGMIHFQ 559
            N TL +KV+  GD+FV P G+IH++
Sbjct:  143 NYTLYSKVIGPGDMFVIPPGLIHYE 167          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: ABP20_PRUPE (Auxin-binding protein ABP20 OS=Prunus persica GN=ABP20 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.056e-16
Identity = 43/93 (46.24%), Postives = 53/93 (56.99%), Query Frame = 3
Query:  153 LQDICVA-IDEPKNAVFVNGKFCKDPKLAKAQDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            +QD CVA +  P+      G  CK P   K  DF  SGL   GNT+N +  +VT A V Q PG+N LGIS  R+D A  G  P HTHP A+E+
Sbjct:   25 VQDFCVADLAAPEGPA---GFSCKKPASVKVNDFVFSGLGIAGNTSNIIKAAVTPAFVAQFPGVNGLGISIARLDLAVGGVVPFHTHPGASEV 114          

HSP 2 Score: 33.4982 bits (75), Expect = 1.056e-16
Identity = 13/25 (52.00%), Postives = 18/25 (72.00%), Query Frame = 2
Query:  485 NNTLIAKVLNKGDVFVFPIGMIHFQ 559
            +NT   + L KGD+ VFP G++HFQ
Sbjct:  130 DNTPYLQTLEKGDIMVFPQGLLHFQ 154          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL12_ORYSJ (Germin-like protein 1-2 OS=Oryza sativa subsp. japonica GN=Os01g0705100 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.312e-16
Identity = 45/96 (46.88%), Postives = 58/96 (60.42%), Query Frame = 3
Query:  141 DPSPLQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            D  PLQDICVA  + + A  V+G  CK      + DFF   + +  +T+N  G + T A V   PGLNTLG+S  R D AP G NPPH+HPRA+E+
Sbjct:   30 DSPPLQDICVA--DLRAATAVDGFPCKPTASVVSDDFFCDAIVQAPSTSNPFGVNSTRATVSAFPGLNTLGLSITRTDLAPGGLNPPHSHPRASEL 123          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: AB19B_PRUPE (Auxin-binding protein ABP19b OS=Prunus persica GN=ABP19B PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.787e-16
Identity = 41/92 (44.57%), Postives = 49/92 (53.26%), Query Frame = 3
Query:  153 LQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            +QD CVA  + K      G  CK P +    DF  SGL   GNT N    +VT A   Q PG+N LGIS  R+D  P G  P HTHP A+E+
Sbjct:   20 VQDFCVA--DYKAPDGPAGYSCKKPAIVTVNDFVYSGLGIAGNTTNIFKAAVTPAFAAQFPGVNGLGISLARLDLGPGGVVPFHTHPGASEV 109          

HSP 2 Score: 35.039 bits (79), Expect = 1.787e-16
Identity = 14/25 (56.00%), Postives = 18/25 (72.00%), Query Frame = 2
Query:  485 NNTLIAKVLNKGDVFVFPIGMIHFQ 559
            +NT   K L KGD+ VFP G++HFQ
Sbjct:  125 DNTPYLKTLKKGDIIVFPQGLLHFQ 149          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL33_ARATH (Germin-like protein subfamily 3 member 3 OS=Arabidopsis thaliana GN=GER3 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.322e-16
Identity = 38/92 (41.30%), Postives = 51/92 (55.43%), Query Frame = 3
Query:  153 LQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            +QD CVA  +PK     +G  CK+P      DF  +GL   GNT+N +  +VT A      G+N LG+S  R+D A  G  P HTHP A+E+
Sbjct:   22 VQDFCVA--DPKGPQSPSGYSCKNPDQVTENDFAFTGLGTAGNTSNIIKAAVTPAFAPAYAGINGLGVSLARLDLAGGGVIPLHTHPGASEV 111          

HSP 2 Score: 35.8094 bits (81), Expect = 2.322e-16
Identity = 15/29 (51.72%), Postives = 19/29 (65.52%), Query Frame = 2
Query:  488 NTLIAKVLNKGDVFVFPIGMIHFQFTSEK 574
            N +  K LN+GD  VFP G++HFQ  S K
Sbjct:  128 NKVYLKTLNRGDSMVFPQGLLHFQLNSGK 156          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GLP1_SINAL (Germin-like protein 1 OS=Sinapis alba GN=GLP1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.018e-16
Identity = 40/92 (43.48%), Postives = 51/92 (55.43%), Query Frame = 3
Query:  153 LQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            +QD CVA  +PK     +G  CK+P      DF  SGL K GNT+N +  +VT A      GLN L +S  R+D A  G  P HTHP A+E+
Sbjct:   22 VQDFCVA--DPKGPQNPSGYSCKNPDQVTENDFAFSGLGKAGNTSNVIKAAVTPAFAPAFAGLNGLDVSLARLDLAGGGVIPLHTHPGASEV 111          

HSP 2 Score: 33.8834 bits (76), Expect = 3.018e-16
Identity = 14/29 (48.28%), Postives = 19/29 (65.52%), Query Frame = 2
Query:  488 NTLIAKVLNKGDVFVFPIGMIHFQFTSEK 574
            N +  K L++GD  VFP G++HFQ  S K
Sbjct:  128 NKVYLKTLSRGDSMVFPQGLLHFQLNSGK 156          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: AB19A_PRUPE (Auxin-binding protein ABP19a OS=Prunus persica GN=ABP19A PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.926e-16
Identity = 41/92 (44.57%), Postives = 49/92 (53.26%), Query Frame = 3
Query:  153 LQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEI 428
            +QD CVA  + K      G  CK P      DF  SGL   GNT N +  +VT A   Q PG+N LGIS  R+D  P G  P HTHP A+E+
Sbjct:   20 VQDFCVA--DYKAPDGPAGYSCKKPAKVTINDFVYSGLGIAGNTTNIIKAAVTPAFAAQFPGVNGLGISLARLDLGPGGVIPFHTHPGASEV 109          

HSP 2 Score: 35.039 bits (79), Expect = 3.926e-16
Identity = 14/25 (56.00%), Postives = 18/25 (72.00%), Query Frame = 2
Query:  485 NNTLIAKVLNKGDVFVFPIGMIHFQ 559
            +NT   K L KGD+ VFP G++HFQ
Sbjct:  125 DNTPYLKTLKKGDIMVFPQGLLHFQ 149          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL37_ORYSJ (Germin-like protein 3-7 OS=Oryza sativa subsp. japonica GN=GER7 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.510e-16
Identity = 46/111 (41.44%), Postives = 60/111 (54.05%), Query Frame = 3
Query:  141 DPSPLQDICVAIDEP--KNAVFVNGKFCKDPKLAKAQDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEIPGGPGGNTLCWFL 467
            DP P+QD CVA+     + +    G  CK      + DFF +GL   G+T N  G S+   NVE  P LNTLG++  R+D AP G NP H+HPRA E+     G  L  F+
Sbjct:   36 DPEPIQDFCVAVPRAGGEASPAYPGFPCKPASAVVSDDFFFAGLAAAGSTDNPFGASLKPGNVEAFPALNTLGVAINRVDLAPGGVNPLHSHPRAAELVHVITGRMLVGFV 146          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GLP1_IPONI (Germin-like protein OS=Ipomoea nil GN=GLP PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 6.626e-16
Identity = 45/105 (42.86%), Postives = 57/105 (54.29%), Query Frame = 3
Query:  153 LQDICVAIDEPKNAVFVNGKFCKDPKLAKAQDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDYAPYGQNPPHTHPRATEIPGGPGGNTLCWFL 467
            + D CVA + P      +G  CK+     A DF  SGL KPGNT N +  +VT A V Q PG+  LG++  R+D AP G  P HTHP A+EI     G  L  F+
Sbjct:   24 VNDFCVA-NGPGARDTPSGFVCKNTAKVTAADFVYSGLAKPGNTTNIINAAVTPAFVGQFPGVIGLGVTLARLDLAPGGVIPMHTHPGASEILNVVEGTILAAFI 127          

HSP 2 Score: 28.1054 bits (61), Expect = 6.626e-16
Identity = 14/35 (40.00%), Postives = 20/35 (57.14%), Query Frame = 2
Query:  455 MLVFVTSNQLNNTLIAKVLNKGDVFVFPIGMIHFQ 559
            +  F++S    N +  K L  GDV VFP G++ FQ
Sbjct:  123 LAAFISSG---NKVYEKALYPGDVMVFPQGLLDFQ 154          
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Match: GL24_ORYSJ (Germin-like protein 2-4 OS=Oryza sativa subsp. japonica GN=Os02g0532500 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.451e-15
Identity = 40/99 (40.40%), Postives = 49/99 (49.49%), Query Frame = 3
Query:  141 DPSPLQDICV---AIDEPKNAVFVNGKFCKDPKLAKAQDFFLSGLDKPGNTANRLGFSVTNANVEQIPGLNTLGISAVRIDY-APYGQNPPHTHPRATE 425
            DP  +QD CV       P     +    C+ P    A DF  SG+   GN +   GF+  +    Q PGL+TLG+S  R D  A  G NPPH HPRATE
Sbjct:   24 DPDAVQDFCVPDAGRGRPVELAMLPAYPCRSPANLTAGDFAFSGVRAAGNFSPETGFAGVSVTPAQFPGLHTLGMSFARADLSAAGGVNPPHYHPRATE 122          

HSP 2 Score: 34.2686 bits (77), Expect = 1.451e-15
Identity = 22/73 (30.14%), Postives = 33/73 (45.21%), Query Frame = 1
Query:  433 VVLEGTLYVGFCDIKPAE*HTHCKSSEQGRCFCVSDWHDSLPIHIGKTNAVAIAALSSQFPGVITIANTGFGA 651
            +VL G +Y GF D   +      K  EQG             +++G T A    A +S+ PG++ I  T FG+
Sbjct:  125 LVLAGRVYAGFVD---SGGRLFAKVLEQGEVMVFPRAMVHFQLNVGDTPATVYGAFNSENPGIVRIPATVFGS 194          
The following BLAST results are available for this feature:
BLAST of BQ623531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
GLT3_ARATH2.184e-1743.12Germin-like protein subfamily T member 3 OS=Arabid... [more]
ABP20_PRUPE1.056e-1646.24Auxin-binding protein ABP20 OS=Prunus persica GN=A... [more]
GL12_ORYSJ1.312e-1646.88Germin-like protein 1-2 OS=Oryza sativa subsp. jap... [more]
AB19B_PRUPE1.787e-1644.57Auxin-binding protein ABP19b OS=Prunus persica GN=... [more]
GL33_ARATH2.322e-1641.30Germin-like protein subfamily 3 member 3 OS=Arabid... [more]
GLP1_SINAL3.018e-1643.48Germin-like protein 1 OS=Sinapis alba GN=GLP1 PE=2... [more]
AB19A_PRUPE3.926e-1644.57Auxin-binding protein ABP19a OS=Prunus persica GN=... [more]
GL37_ORYSJ6.510e-1641.44Germin-like protein 3-7 OS=Oryza sativa subsp. jap... [more]
GLP1_IPONI6.626e-1642.86Germin-like protein OS=Ipomoea nil GN=GLP PE=2 SV=... [more]
GL24_ORYSJ1.451e-1540.40Germin-like protein 2-4 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00622 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00622 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623531 ID=BQ623531; Name=BQ623531; organism=Citrus sinensis; type=EST; length=693bp
AATAAGTTCAGAAATTGATTAAACAGAGTGAGATCCTACAGCTAGCTAGC
TAGCTAATTAAACACACAATGAAAACCAGTGTTCAATTTCTTAAAGGTTT
TGCTCTCTTGGTTTTAGCTTCTTCGTTGGCCTCTGCCTTTGATCCTAGTC
CTCTTCAGGATATCTGTGTAGCCATCGATGAGCCCAAGAACGCAGTTTTT
GTTAACGGGAAGTTCTGCAAGGACCCCAAGCTTGCTAAAGCTCAAGATTT
CTTCTTATCAGGGCTAGACAAGCCTGGAAACACAGCAAACCGTCTTGGTT
TTAGTGTGACAAATGCAAATGTTGAGCAAATTCCAGGACTCAACACCCTT
GGCATATCAGCAGTCCGTATTGACTATGCACCATACGGCCAAAACCCACC
TCACACGCACCCTCGTGCCACTGAGATCCCTGGTGGTCCTGGAGGGAACA
CTTTATGTTGGTTTTTGTGACATCAAACCAGCTGAATAACACACTCATTG
CAAAAGTTCTGAACAAGGGAGATGTTTTTGTGTTTCCGATTGGCATGATT
CACTTCCAATTCACATCGGAAAAACAAATGCAGTTGCAATTGCTGCTCTA
AGCAGCCAGTTCCCTGGTGTCATTACCATAGCAAACACGGGCTTCGGAGC
CAATCCTCCGATCAATCCTGATTTTCTTGCCAGGCGTCCAGTT
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