BQ623542

Overview
NameBQ623542
Unique NameBQ623542
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length669
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5331 contig Csv1_Contig5331:622..1292. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623542 vs. ExPASy Swiss-Prot
Match: YVTA_BACSU (Uncharacterized serine protease yvtA OS=Bacillus subtilis GN=yvtA PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.178e-21
Identity = 78/210 (37.14%), Postives = 104/210 (49.52%), Query Frame = 3
Query:   30 GVSADLLVGQKVYAIGNPFG--LDHTLTTGVISGLRREISSAATGRPIQ-DVIQTDAAINXXXXXXXXXXXXXXXXXXXTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFGKVTRPILGIKFAPDQSV-------------EQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRIL-DQCKVGDE 608
            G S+ L  G+KV AIGNP G     T+T G+ISGL R I    T   ++ +V+QTDAAIN                   +   S SG  S +GF+IP + V  IVDQL++ GKV RP LG++      V             +QLG  GV V +   N PA KAG+ S            D+I  +NGK V + +D+ +IL    KVGD+
Sbjct:  235 GDSSQLRTGEKVIAIGNPLGQQFSGTVTQGIISGLNRTIDVDTTQGTVEMNVLQTDAAINPGNSGGPLINASGQVIGINSLKVSESGVES-LGFAIPSNDVEPIVDQLLQNGKVDRPFLGVQMIDMSQVPETYQENTLGLFGDQLG-KGVYVKEVQANSPAEKAGIKSE-----------DVIVKLNGKDVESSADIRQILYKDLKVGDK 431          
BLAST of BQ623542 vs. ExPASy Swiss-Prot
Match: DEGP_RICPR (Probable serine protease do-like OS=Rickettsia prowazekii GN=degP PE=3 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.395e-20
Identity = 75/211 (35.55%), Postives = 101/211 (47.87%), Query Frame = 3
Query:    6 DKLRPIPI---GVSADLLVGQKVYAIGNPFG-LDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINXXXXXXXXXXXXXXXXXXXTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFGKVTRPILGIKFAP-DQSVEQL----GVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEV 611
            D   P+P    G S D  VG  V AIGNPFG L  T+T+G+IS   R+I    T   + + IQTDAAIN                   TAI+SP G + G+GF+IP +T   I+++L K GKV+R  LG+      + + ++    G +GVLV     NGP  KAG+             GDII     + V N   L  I+    +  EV
Sbjct:  176 DSEEPLPFVEFGDSNDARVGDWVIAIGNPFGNLGGTVTSGIISSKGRDID-VDTDNIVDNFIQTDAAINNGNSGGPMFNLDQKVIGVNTAIFSPLGTNIGIGFAIPSNTAKPIIERLKKDGKVSRGRLGVTIQDLTEEISEVLGFKGTNGVLVSKVQENGPGYKAGIKK-----------GDIIIKFGDRLVKNTKKLRVIIADTPINQEV 374          
BLAST of BQ623542 vs. ExPASy Swiss-Prot
Match: DEGP_SALTY (Protease do OS=Salmonella typhimurium GN=degP PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.059e-20
Identity = 70/207 (33.82%), Postives = 99/207 (47.83%), Query Frame = 3
Query:   12 LRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINXXXXXXXXXXXXXXXXXXXTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFGKVTRPILGI-------KFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEV 611
            L  I +  S  L VG    AIGNPFGL  T+T+G++S L R   S       ++ IQTDAAIN                   TAI +P G + G+GF+IP + V  +  Q+V++G+V R  LGI       + A    V+     G  V    PN  A KAG+ +           GD+ITS+NGK +S+ + L   +    VG ++
Sbjct:  174 LTAIKLADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGR---SGLNVENYENFIQTDAAINRGNSGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTSQMVEYGQVKRGELGIMGTELNSELAKAMKVD--AQRGAFVSQVMPNSSAAKAGIKA-----------GDVITSLNGKPISSFAALRAQVGTMPVGSKI 364          
BLAST of BQ623542 vs. ExPASy Swiss-Prot
Match: DEGP_ECOLI (Protease do OS=Escherichia coli (strain K12) GN=degP PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.301e-20
Identity = 70/207 (33.82%), Postives = 99/207 (47.83%), Query Frame = 3
Query:   12 LRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINXXXXXXXXXXXXXXXXXXXTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFGKVTRPILGI-------KFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEV 611
            L  I +  S  L VG    AIGNPFGL  T+T+G++S L R   S       ++ IQTDAAIN                   TAI +P G + G+GF+IP + V  +  Q+V++G+V R  LGI       + A    V+     G  V    PN  A KAG+ +           GD+ITS+NGK +S+ + L   +    VG ++
Sbjct:  173 LTAIKMADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGR---SGLNAENYENFIQTDAAINRGNSGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTSQMVEYGQVKRGELGIMGTELNSELAKAMKVD--AQRGAFVSQVLPNSSAAKAGIKA-----------GDVITSLNGKPISSFAALRAQVGTMPVGSKL 363          
BLAST of BQ623542 vs. ExPASy Swiss-Prot
Match: DEGP_ECO57 (Protease do OS=Escherichia coli O157:H7 GN=degP PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.301e-20
Identity = 70/207 (33.82%), Postives = 99/207 (47.83%), Query Frame = 3
Query:   12 LRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINXXXXXXXXXXXXXXXXXXXTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFGKVTRPILGI-------KFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEV 611
            L  I +  S  L VG    AIGNPFGL  T+T+G++S L R   S       ++ IQTDAAIN                   TAI +P G + G+GF+IP + V  +  Q+V++G+V R  LGI       + A    V+     G  V    PN  A KAG+ +           GD+ITS+NGK +S+ + L   +    VG ++
Sbjct:  173 LTAIKMADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGR---SGLNAENYENFIQTDAAINRGNSGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTSQMVEYGQVKRGELGIMGTELNSELAKAMKVD--AQRGAFVSQVLPNSSAAKAGIKA-----------GDVITSLNGKPISSFAALRAQVGTMPVGSKL 363          
BLAST of BQ623542 vs. ExPASy Swiss-Prot
Match: DEGQ_ECOLI (Protease degQ OS=Escherichia coli (strain K12) GN=degQ PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.042e-20
Identity = 70/206 (33.98%), Postives = 100/206 (48.54%), Query Frame = 3
Query:    9 KLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINXXXXXXXXXXXXXXXXXXXTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFGKVTRPILGIK----FAPDQSVEQLGVS-GVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEV 611
            KL  I I  S  L VG    A+GNPFGL  T T+G++S L R   S      +++ IQTDA+IN                   TAI +P G S G+GF+IP +    +  QL+ FG++ R +LGIK     A       L V  G  V +  P   + KAG+ +           GDIITS+NGK +++ ++L   +   + G +V
Sbjct:  150 KLTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGR---SGLNLEGLENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIKRGLLGIKGTEMSADIAKAFNLDVQRGAFVSEVLPGSGSAKAGVKA-----------GDIITSLNGKPLNSFAELRSRIATTEPGTKV 341          
BLAST of BQ623542 vs. ExPASy Swiss-Prot
Match: DEGP_RICCN (Probable serine protease do-like OS=Rickettsia conorii GN=degP PE=3 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.014e-19
Identity = 77/211 (36.49%), Postives = 101/211 (47.87%), Query Frame = 3
Query:    6 DKLRPIPI---GVSADLLVGQKVYAIGNPFG-LDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINXXXXXXXXXXXXXXXXXXXTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFGKVTRPILG--IKFAPDQSVEQLGVS---GVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEV 611
            D   P+P    G S D  VG  V AIGNPFG L  T+T+G+IS   R+I    T   + + IQTDAAIN                   TAI+SP G + G+GF+IP +T   I+++L K GKV+R  LG  I+   +   E LG+    GVLV     +GP  KAG+ +           GDII       V N   L  I+    +  EV
Sbjct:  171 DSEEPLPFVEFGDSNDARVGDWVIAIGNPFGNLGGTVTSGIISSKGRDID-IDTDNIVDNFIQTDAAINNGNSGGPMFNLDQKVIGVNTAIFSPLGTNIGIGFAIPSNTAKPIIERLKKDGKVSRGRLGVTIQDLTEDISEGLGLKNTRGVLVAKVQEDGPGDKAGIKT-----------GDIIIEFADIPVKNTKKLRVIIADAPIDQEV 369          
BLAST of BQ623542 vs. ExPASy Swiss-Prot
Match: DEGP_CHLTR (Probable serine protease do-like OS=Chlamydia trachomatis GN=degP PE=3 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.014e-19
Identity = 73/208 (35.10%), Postives = 92/208 (44.23%), Query Frame = 3
Query:    6 DKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINXXXXXXXXXXXXXXXXXXXTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFGKVTRPILGIKFAPDQS-----VEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVI 614
            +KL  +  G S  L +G    AIGNPFGL  T+T GVIS   R           +D IQTDAAIN                   TAI S SG   G+GF+IP      ++DQL+  G+VTR  LG+   P  S      +   V G LV D     PA KAGL              D+I + NGK+V + S L   +     G  V+
Sbjct:  182 EKLPFLTFGNSDQLQIGDWAIAIGNPFGLQATVTVGVISAKGRNQLHIVD---FEDFIQTDAAINPGNSGGPLLNINGQVIGVNTAIVSGSGGYIGIGFAIPSLMAKRVIDQLISDGQVTRGFLGVTLQPIDSELATCYKLEKVYGALVTDVVKGSPAEKAGLRQE-----------DVIVAYNGKEVESLSALRNAISLMMPGTRVV 375          
BLAST of BQ623542 vs. ExPASy Swiss-Prot
Match: DEGP_CHLPN (Probable serine protease do-like OS=Chlamydia pneumoniae GN=degP PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.436e-19
Identity = 70/185 (37.84%), Postives = 86/185 (46.49%), Query Frame = 3
Query:   21 IPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINXXXXXXXXXXXXXXXXXXXTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFGKVTRPILGIKFAPDQS-----VEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN 560
            +  G S  L VG    AIGNPFGL  T+T GVIS   R     A     +D IQTDAAIN                   TAI S SG   G+GF+IP    N I+DQL++ G+VTR  LG+   P  +      +   V G LV D     PA KAGL              D+I + NGK+V +
Sbjct:  178 LSFGNSDHLKVGDWAIAIGNPFGLQATVTVGVISAKGRNQLHIAD---FEDFIQTDAAINPGNSGGPLLNIDGQVIGVNTAIVSGSGGYIGIGFAIPSLMANRIIDQLIRDGQVTRGFLGVTLQPIDAELAACYKLEKVYGALVTDVVKGSPADKAGLKQE-----------DVIIAYNGKEVDS 348          
BLAST of BQ623542 vs. ExPASy Swiss-Prot
Match: DEGP5_ARATH (Protease Do-like 5, chloroplastic OS=Arabidopsis thaliana GN=DEGP5 PE=1 SV=3)

HSP 1 Score: 93.2041 bits (230), Expect = 1.306e-18
Identity = 55/124 (44.35%), Postives = 71/124 (57.26%), Query Frame = 3
Query:    3 GDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINXXXXXXXXXXXXXXXXXXXTAIYS--PSGASSGVGFSIPVDTVNGIVDQLVKFGKVTR 368
            G +L P+ +G S DL VGQ  +AIGNP+G ++TLT GV+SGL REI S   G+ I + IQTDA IN                   TA ++   SG SSGV F+IP+DTV   V  L+ +G   R
Sbjct:  198 GRELNPVVLGTSNDLRVGQSCFAIGNPYGYENTLTIGVVSGLGREIPS-PNGKSISEAIQTDADINSGNSGGPLLDSYGHTIGVNTATFTRKGSGMSSGVNFAIPIDTVVRTVPYLIVYGTAYR 320          
The following BLAST results are available for this feature:
BLAST of BQ623542 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
YVTA_BACSU8.178e-2137.14Uncharacterized serine protease yvtA OS=Bacillus s... [more]
DEGP_RICPR1.395e-2035.55Probable serine protease do-like OS=Rickettsia pro... [more]
DEGP_SALTY4.059e-2033.82Protease do OS=Salmonella typhimurium GN=degP PE=2... [more]
DEGP_ECOLI5.301e-2033.82Protease do OS=Escherichia coli (strain K12) GN=de... [more]
DEGP_ECO575.301e-2033.82Protease do OS=Escherichia coli O157:H7 GN=degP PE... [more]
DEGQ_ECOLI9.042e-2033.98Protease degQ OS=Escherichia coli (strain K12) GN=... [more]
DEGP_RICCN2.014e-1936.49Probable serine protease do-like OS=Rickettsia con... [more]
DEGP_CHLTR2.014e-1935.10Probable serine protease do-like OS=Chlamydia trac... [more]
DEGP_CHLPN3.436e-1937.84Probable serine protease do-like OS=Chlamydia pneu... [more]
DEGP5_ARATH1.306e-1844.35Protease Do-like 5, chloroplastic OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00633 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00633 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623542 ID=BQ623542; Name=BQ623542; organism=Citrus sinensis; type=EST; length=669bp
ACGGGGATAAATTAAGACCTATTCCTATTGGTGTCTCTGCAGACTTGCTT
GTTGGTCAGAAAGTATATGCTATTGGCAACCCCTTTGGACTCGACCATAC
CCTTACAACTGGCGTGATCAGTGGGCTTCGTAGGGAAATCAGTTCTGCAG
CCACTGGCCGTCCAATTCAGGATGTTATACAAACTGATGCGGCCATTAAT
CCTGGTAATAGTGGAGGGCCACTTTTAGATAGTTCAGGAAGCCTAATTGG
AATAAATACAGCTATATACTCTCCATCTGGTGCATCCTCTGGTGTTGGAT
TTTCGATTCCAGTTGACACTGTAAATGGCATTGTCGATCAACTAGTTAAG
TTTGGTAAGGTCACACGACCTATTTTAGGGATTAAGTTCGCACCTGATCA
ATCTGTGGAGCAGTTAGGTGTAAGTGGAGTGCTCGTCTTAGATGCTCCTC
CAAACGGTCCTGCTGGCAAAGCAGGCTTGCTATCAACCAAACGCGATGCC
TATGGCAGACTTATTTTGGGTGACATCATAACATCTGTGAATGGAAAAAA
GGTCTCCAATGGCAGCGACTTGTACAGAATTCTTGACCAATGTAAAGTTG
GAGATGAGGTGATTGGTTGAGGTATTGCGCCGGAGATCAGAAGGAGAAGA
TTCCCGGTAAAACTTGAAC
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