BQ623545
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623545 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 3.902e-85 Identity = 74/89 (83.15%), Postives = 80/89 (89.89%), Query Frame = 1 Query: 46 PRHLLRTCELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRI 312 P + ELEVIH RWAMLGALGCVFPE+L+KNG+KFGEAVWFKAGAQIFSEGGLDY GNPNLIHAQSILAIWACQVVLMG +EGYR+ Sbjct: 89 PETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRV 177 HSP 2 Score: 149.058 bits (375), Expect = 3.902e-85 Identity = 71/84 (84.52%), Postives = 76/84 (90.48%), Query Frame = 2 Query: 326 LVKDLTHFTPGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVAHNAWAYATNFVPG 577 L + L PGGAFDPLGLADDP+ AELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIENLYDH+ADPVA+NAWAYATNFVPG Sbjct: 182 LGEGLDPLLPGGAFDPLGLADDPEACAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANNAWAYATNFVPG 265 HSP 3 Score: 47.3654 bits (111), Expect = 3.902e-85 Identity = 19/21 (90.48%), Postives = 20/21 (95.24%), Query Frame = 3 Query: 3 PGDYGWDTAGLSADPETFAKN 65 PGDYGWDTA +SADPETFAKN Sbjct: 75 PGDYGWDTAAVSADPETFAKN 95
BLAST of BQ623545 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.129e-84 Identity = 75/89 (84.27%), Postives = 81/89 (91.01%), Query Frame = 1 Query: 46 PRHLLRTCELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRI 312 P + ELEVIHS WAMLGALGCVFPE+LS+NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYRI Sbjct: 29 PETFAKNRELEVIHSTWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRI 117 HSP 2 Score: 144.821 bits (364), Expect = 1.129e-84 Identity = 67/75 (89.33%), Postives = 72/75 (96.00%), Query Frame = 2 Query: 353 PGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVAHNAWAYATNFVPG 577 PGG+FDPLGLADDP+ FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV +NAWAYATNFVPG Sbjct: 131 PGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 205 HSP 3 Score: 50.8322 bits (120), Expect = 1.129e-84 Identity = 21/21 (100.00%), Postives = 21/21 (100.00%), Query Frame = 3 Query: 3 PGDYGWDTAGLSADPETFAKN 65 PGDYGWDTAGLSADPETFAKN Sbjct: 15 PGDYGWDTAGLSADPETFAKN 35
BLAST of BQ623545 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.464e-84 Identity = 73/89 (82.02%), Postives = 81/89 (91.01%), Query Frame = 1 Query: 46 PRHLLRTCELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRI 312 P + ELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLG+P LIHAQSILAIWACQV+LMG +EGYR+ Sbjct: 101 PETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRV 189 HSP 2 Score: 145.206 bits (365), Expect = 1.464e-84 Identity = 68/75 (90.67%), Postives = 71/75 (94.67%), Query Frame = 2 Query: 353 PGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVAHNAWAYATNFVPG 577 PGG FDPLGLADDPD FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIENL DH+ADPV +NAWAYATNFVPG Sbjct: 203 PGGNFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPG 277 HSP 3 Score: 50.8322 bits (120), Expect = 1.464e-84 Identity = 21/21 (100.00%), Postives = 21/21 (100.00%), Query Frame = 3 Query: 3 PGDYGWDTAGLSADPETFAKN 65 PGDYGWDTAGLSADPETFAKN Sbjct: 87 PGDYGWDTAGLSADPETFAKN 107
BLAST of BQ623545 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 4.222e-84 Identity = 74/89 (83.15%), Postives = 82/89 (92.13%), Query Frame = 1 Query: 46 PRHLLRTCELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRI 312 P + ELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWACQVVLMG +EGYR+ Sbjct: 88 PETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEGYRV 176 HSP 2 Score: 142.124 bits (357), Expect = 4.222e-84 Identity = 65/75 (86.67%), Postives = 71/75 (94.67%), Query Frame = 2 Query: 353 PGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVAHNAWAYATNFVPG 577 PGG FDPLGLADDP+ FA++KVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV +NAWAYATNFVPG Sbjct: 190 PGGTFDPLGLADDPEAFADVKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 264 HSP 3 Score: 50.8322 bits (120), Expect = 4.222e-84 Identity = 21/21 (100.00%), Postives = 21/21 (100.00%), Query Frame = 3 Query: 3 PGDYGWDTAGLSADPETFAKN 65 PGDYGWDTAGLSADPETFAKN Sbjct: 74 PGDYGWDTAGLSADPETFAKN 94
BLAST of BQ623545 vs. ExPASy Swiss-Prot
Match: CB21_ORYSJ (Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R PE=2 SV=2) HSP 1 Score: 157.918 bits (398), Expect = 4.222e-84 Identity = 75/89 (84.27%), Postives = 81/89 (91.01%), Query Frame = 1 Query: 46 PRHLLRTCELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRI 312 P + ELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG VEGYRI Sbjct: 88 PETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRI 176 HSP 2 Score: 145.206 bits (365), Expect = 4.222e-84 Identity = 67/75 (89.33%), Postives = 72/75 (96.00%), Query Frame = 2 Query: 353 PGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVAHNAWAYATNFVPG 577 PGGAFDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV +NAWAYATNFVPG Sbjct: 190 PGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 264 HSP 3 Score: 50.8322 bits (120), Expect = 4.222e-84 Identity = 21/21 (100.00%), Postives = 21/21 (100.00%), Query Frame = 3 Query: 3 PGDYGWDTAGLSADPETFAKN 65 PGDYGWDTAGLSADPETFAKN Sbjct: 74 PGDYGWDTAGLSADPETFAKN 94
BLAST of BQ623545 vs. ExPASy Swiss-Prot
Match: CB2B_PINSY (Chlorophyll a-b binding protein type 2 member 1B, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 5.498e-84 Identity = 74/89 (83.15%), Postives = 82/89 (92.13%), Query Frame = 1 Query: 46 PRHLLRTCELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRI 312 P + + ELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+L+HAQSILAIWACQV+LMG VEGYRI Sbjct: 97 PENFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRI 185 HSP 2 Score: 143.28 bits (360), Expect = 5.498e-84 Identity = 66/75 (88.00%), Postives = 72/75 (96.00%), Query Frame = 2 Query: 353 PGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVAHNAWAYATNFVPG 577 PGG+FDPLGLA+DP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIENL DH+ADPV +NAWAYATNFVPG Sbjct: 199 PGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPG 273 HSP 3 Score: 48.9062 bits (115), Expect = 5.498e-84 Identity = 20/21 (95.24%), Postives = 20/21 (95.24%), Query Frame = 3 Query: 3 PGDYGWDTAGLSADPETFAKN 65 PGDYGWDTAGLSADPE FAKN Sbjct: 83 PGDYGWDTAGLSADPENFAKN 103
BLAST of BQ623545 vs. ExPASy Swiss-Prot
Match: CB2A_PYRPY (Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus pyrifolia PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 7.161e-84 Identity = 73/89 (82.02%), Postives = 81/89 (91.01%), Query Frame = 1 Query: 46 PRHLLRTCELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRI 312 P + ELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAGAQIFSEGGLDYLG+P LIHAQSILAIWACQV+LMG +EGYR+ Sbjct: 101 PETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYRV 189 HSP 2 Score: 142.895 bits (359), Expect = 7.161e-84 Identity = 66/75 (88.00%), Postives = 71/75 (94.67%), Query Frame = 2 Query: 353 PGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVAHNAWAYATNFVPG 577 PGG FDPLGLADDPD FA++KVKE+KNGRLAMFSMFGFFVQAIVTGKGPIENL DH+ADPV +NAWAYATNFVPG Sbjct: 203 PGGNFDPLGLADDPDAFADVKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNFVPG 277 HSP 3 Score: 50.8322 bits (120), Expect = 7.161e-84 Identity = 21/21 (100.00%), Postives = 21/21 (100.00%), Query Frame = 3 Query: 3 PGDYGWDTAGLSADPETFAKN 65 PGDYGWDTAGLSADPETFAKN Sbjct: 87 PGDYGWDTAGLSADPETFAKN 107
BLAST of BQ623545 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 9.336e-84 Identity = 74/89 (83.15%), Postives = 81/89 (91.01%), Query Frame = 1 Query: 46 PRHLLRTCELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRI 312 P + ELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYRI Sbjct: 90 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRI 178 HSP 2 Score: 142.51 bits (358), Expect = 9.336e-84 Identity = 65/75 (86.67%), Postives = 72/75 (96.00%), Query Frame = 2 Query: 353 PGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVAHNAWAYATNFVPG 577 PGG+FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV +NAWA+ATNFVPG Sbjct: 192 PGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPG 266 HSP 3 Score: 50.8322 bits (120), Expect = 9.336e-84 Identity = 21/21 (100.00%), Postives = 21/21 (100.00%), Query Frame = 3 Query: 3 PGDYGWDTAGLSADPETFAKN 65 PGDYGWDTAGLSADPETFAKN Sbjct: 76 PGDYGWDTAGLSADPETFAKN 96
BLAST of BQ623545 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 9.336e-84 Identity = 72/89 (80.90%), Postives = 81/89 (91.01%), Query Frame = 1 Query: 46 PRHLLRTCELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRI 312 P + ELEVIH RWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYR+ Sbjct: 90 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRV 178 HSP 2 Score: 143.28 bits (360), Expect = 9.336e-84 Identity = 65/75 (86.67%), Postives = 72/75 (96.00%), Query Frame = 2 Query: 353 PGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVAHNAWAYATNFVPG 577 PGG+FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP++NL DH+ADPV +NAWAYATNFVPG Sbjct: 192 PGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLDNLVDHLADPVNNNAWAYATNFVPG 266 HSP 3 Score: 50.8322 bits (120), Expect = 9.336e-84 Identity = 21/21 (100.00%), Postives = 21/21 (100.00%), Query Frame = 3 Query: 3 PGDYGWDTAGLSADPETFAKN 65 PGDYGWDTAGLSADPETFAKN Sbjct: 76 PGDYGWDTAGLSADPETFAKN 96
BLAST of BQ623545 vs. ExPASy Swiss-Prot
Match: CB22_ORYSJ (Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R PE=2 SV=2) HSP 1 Score: 157.918 bits (398), Expect = 9.339e-84 Identity = 75/89 (84.27%), Postives = 81/89 (91.01%), Query Frame = 1 Query: 46 PRHLLRTCELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRI 312 P + ELEVIHSRWAMLGALGCVFPE+L++NGVKFGEAVWFKAG+QIFSEGGLDYLGNP+LIHAQSILAIWA QVVLMG VEGYRI Sbjct: 84 PETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRI 172 HSP 2 Score: 144.05 bits (362), Expect = 9.339e-84 Identity = 66/75 (88.00%), Postives = 72/75 (96.00%), Query Frame = 2 Query: 353 PGGAFDPLGLADDPDQFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHIADPVAHNAWAYATNFVPG 577 PGG+FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV +NAWAYATNFVPG Sbjct: 186 PGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPG 260 HSP 3 Score: 50.8322 bits (120), Expect = 9.339e-84 Identity = 21/21 (100.00%), Postives = 21/21 (100.00%), Query Frame = 3 Query: 3 PGDYGWDTAGLSADPETFAKN 65 PGDYGWDTAGLSADPETFAKN Sbjct: 70 PGDYGWDTAGLSADPETFAKN 90 The following BLAST results are available for this feature:
BLAST of BQ623545 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623545 ID=BQ623545; Name=BQ623545; organism=Citrus sinensis; type=EST; length=665bpback to top |