BQ623590

Overview
NameBQ623590
Unique NameBQ623590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length637
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10901 contig Csv1_Contig10901:708..1345. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P1_ECOLI (Glyceraldehyde-3-phosphate dehydrogenase A OS=Escherichia coli (strain K12) GN=gapA PE=1 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 1.618e-31
Identity = 76/191 (39.79%), Postives = 101/191 (52.88%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            E TG+F+  E A KHI AGAKKV++T P K + P +V G N D Y   + I+SNASCTTNCLAP  KV++  FGII+G MTT H+ T  Q                   NI+P+ST                  G+A RVPTPN           K    E++ AA + +A+ E+KG+L   ++ +VS DF
Sbjct:   95 EATGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKYAGQD-IVSNASCTTNCLAPLAKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYTEDDVVSTDF 284          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P1_ECOL6 (Glyceraldehyde-3-phosphate dehydrogenase A OS=Escherichia coli O6 GN=gapA PE=3 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 1.618e-31
Identity = 76/191 (39.79%), Postives = 101/191 (52.88%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            E TG+F+  E A KHI AGAKKV++T P K + P +V G N D Y   + I+SNASCTTNCLAP  KV++  FGII+G MTT H+ T  Q                   NI+P+ST                  G+A RVPTPN           K    E++ AA + +A+ E+KG+L   ++ +VS DF
Sbjct:   95 EATGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKYAGQD-IVSNASCTTNCLAPLAKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYTEDDVVSTDF 284          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P1_ECO57 (Glyceraldehyde-3-phosphate dehydrogenase A OS=Escherichia coli O157:H7 GN=gapA PE=3 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 1.618e-31
Identity = 76/191 (39.79%), Postives = 101/191 (52.88%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            E TG+F+  E A KHI AGAKKV++T P K + P +V G N D Y   + I+SNASCTTNCLAP  KV++  FGII+G MTT H+ T  Q                   NI+P+ST                  G+A RVPTPN           K    E++ AA + +A+ E+KG+L   ++ +VS DF
Sbjct:   95 EATGLFLTDETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKYAGQD-IVSNASCTTNCLAPLAKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYTEDDVVSTDF 284          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P1_GLORO (Glyceraldehyde-3-phosphate dehydrogenase 1 (Fragment) OS=Globodera rostochiensis GN=GPD-1 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.113e-31
Identity = 78/192 (40.62%), Postives = 101/192 (52.60%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKP-DEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            E TGVF   E A  H++ GAKKV+I+AP   D P YV+GVN D Y P  + +ISNASCTTNCLAP  KV++ +FGII+G MTT H+ T  Q                   NI+P ST                  G+A RVPTPN           K    + + AA +++A+  LKGIL   ++ +VS DF
Sbjct:  102 ESTGVFTTIEKASAHLKGGAKKVVISAPS-ADAPMYVMGVNEDKYDPAKDNVISNASCTTNCLAPLAKVINDEFGIIEGLMTTVHAVTATQKTVDGPNGKQWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTARLEKPASLDAIKAAVKKAAEGNLKGILGYTEDQVVSTDF 292          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P1_DROME (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Drosophila melanogaster GN=Gapdh1 PE=2 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 2.113e-31
Identity = 76/191 (39.79%), Postives = 97/191 (50.79%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            E TGVF   + A  H++ GAKKV+I+AP   D P +V GVN DAY PD  ++SNASCTTNCLAP  KV++  F I++G MTT H+ T  Q                   NI+P +T                  G+A RVPTPN           K    +E+ A   E++   LKGIL   DE +VS DF
Sbjct:   94 ESTGVFTTIDKASTHLKGGAKKVIISAPS-ADAPMFVCGVNLDAYSPDMKVVSNASCTTNCLAPLAKVINDNFEIVEGLMTTVHATTATQKTVDGPSGKLWRDGRGAAQNIIPAATGAAKAVGKVIPALNGKLTGMAFRVPTPNVSVVDLTVRLGKGATYDEIKAKVEEASKGPLKGILGYTDEEVVSTDF 283          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_OMPOL (Glyceraldehyde-3-phosphate dehydrogenase OS=Omphalotus olearius GN=GPD PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.760e-31
Identity = 79/198 (39.90%), Postives = 102/198 (51.52%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSS 592
            E TGVF   + A  H++ GAKKV+I+AP   D P YV GVN DAY P  P ISNASCTTNCLAP  KV+  KFGI++G M+T H+ T  Q                   NI+P+ST                  G++ RVPT +           K+   +E+ AA +E+    LKGIL   ++ LVS DF  +  SS
Sbjct:   96 ESTGVFTTIDKASAHLKGGAKKVIISAPS-ADAPMYVCGVNLDAYDPRRPSISNASCTTNCLAPLAKVIHDKFGIVEGLMSTIHATTATQKTVDGPSNKDWRGGRSVNNNIIPSSTGAAKAVGKVIPSLNGKLTGLSFRVPTLDVSVVDLVVRLEKEATYDEIKAAVKEAVAGPLKGILDYTEDALVSTDFTGNTHSS 292          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_LACDT (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Lactarius deterrimus GN=GPD PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.605e-31
Identity = 78/198 (39.39%), Postives = 104/198 (52.53%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSS 592
            E +GVF   + A  H++ GAKKV+I+AP   D P +VVGVN DAY     +ISNASCTTNCLAP  KV++ KFGI++G M+T H+ T  Q                   NI+P+ST                  G+A RVPT +           K+   +E+  A +E+AD  LKGI+   D+ +VS DF  S  SS
Sbjct:   75 ESSGVFTTVDKASAHLKGGAKKVIISAPS-ADAPMFVVGVNLDAYDSKYTVISNASCTTNCLAPLAKVINDKFGIVEGLMSTIHATTATQKTVDGPSNKDWRGGRAVNGNIIPSSTGAAKAVGKVIPALNGKLTGLAFRVPTNDVSVVDLVVRLEKEATYDEIKLAVKEAADGPLKGIIEYTDDLVVSTDFIGSTASS 271          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3PC_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 1 OS=Zea mays GN=GAPC1 PE=2 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 3.605e-31
Identity = 75/191 (39.27%), Postives = 100/191 (52.36%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            E TGVF D++ A  H++ GAKKV+I+AP K D P +VVGVN D Y  D  I+SNASCTTNCLAP  KV+   FGI++G MTT H+ T  Q                   NI+P+ST                  G++ RVPT +           K    E++  A + +++  LKGI+   +E LVS DF
Sbjct:   99 ESTGVFTDKDKAAAHLKGGAKKVVISAPSK-DAPMFVVGVNEDKYTSDVNIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSAKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPTVDVSVVDLTVRIEKGASYEDIKKAIKAASEGPLKGIMGYVEEDLVSTDF 288          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_KLEPN (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Klebsiella pneumoniae GN=gap PE=3 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 4.708e-31
Identity = 74/191 (38.74%), Postives = 100/191 (52.36%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            E TG+F+  E A KHI AGAKKV++T P K + P +V G N DAY   + I+SNASCTTNCLAP  KV++  FGI++G MTT H+ T  Q                   NI+P+ST                  G+A RVPTPN           K    EE+  A + +++  +KG+L   ++ +VS DF
Sbjct:   89 EATGIFLTDETARKHITAGAKKVVLTGPSKDNTPMFVRGANFDAYAGQD-IVSNASCTTNCLAPLAKVINDNFGIVEGLMTTVHATTATQKTVDGPSHKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTVRLEKAASYEEIKKAIKAASEGAMKGVLGYTEDDVVSTDF 278          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_ERYGR (Glyceraldehyde-3-phosphate dehydrogenase OS=Erysiphe graminis subsp. hordei GN=GPD PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 4.708e-31
Identity = 79/198 (39.90%), Postives = 105/198 (53.03%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSS 592
            E TGVF   E A  H++ GAKKV+I+AP   D P +V+GVN  +Y  D  +ISNASCTTNCLAP  KV++ +F II+G MTT HSYT  Q                   NI+P+ST                  G+A+RVPT N           K    +E+  A + +A NEL+GILS  ++ +VS D   ++ SS
Sbjct:   97 ESTGVFTTTEKAKAHLKGGAKKVIISAPS-ADAPMFVMGVNHKSYTTDLEVISNASCTTNCLAPLAKVINDEFTIIEGLMTTIHSYTATQKTVDGPSAKDWRGGRTAAQNIIPSSTGAAKAVGKVIPALNGKLTGMAMRVPTANVSVVDLTCRIEKSATYDEIKKAIKIAAGNELQGILSYTEDEIVSTDLIGNNHSS 293          
The following BLAST results are available for this feature:
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348
Match NameE-valueIdentityDescription
G3P1_ECOLI1.618e-3139.79Glyceraldehyde-3-phosphate dehydrogenase A OS=Esch... [more]
G3P1_ECOL61.618e-3139.79Glyceraldehyde-3-phosphate dehydrogenase A OS=Esch... [more]
G3P1_ECO571.618e-3139.79Glyceraldehyde-3-phosphate dehydrogenase A OS=Esch... [more]
G3P1_GLORO2.113e-3140.63Glyceraldehyde-3-phosphate dehydrogenase 1 (Fragme... [more]
G3P1_DROME2.113e-3139.79Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Dros... [more]
G3P_OMPOL2.760e-3139.90Glyceraldehyde-3-phosphate dehydrogenase OS=Omphal... [more]
G3P_LACDT3.605e-3139.39Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3PC_MAIZE3.605e-3139.27Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P_KLEPN4.708e-3138.74Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3P_ERYGR4.708e-3139.90Glyceraldehyde-3-phosphate dehydrogenase OS=Erysip... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00681 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00681 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623590 ID=BQ623590; Name=BQ623590; organism=Citrus sinensis; type=EST; length=637bp
TGAAGGGACAGGAGTGTTTGTAGACAGAGAGGGTGCGGGCAAGCACATTC
AGGCTGGTGCCAAGAAAGTACTTATTACAGCCCCCGGCAAGGGTGACATC
CCAACCTACGTTGTTGGTGTCAATGCGGATGCTTACAAACCAGATGAGCC
CATCATCAGCAATGCTTCTTGCACAACCAACTGCCTTGCCCCATTCGTCA
AGGTTCTTGACCAGAAGTTTGGCATTATCAAGGGAACCATGACCACCACA
CACTCGTACACTGGCGACCAAAGACTACTCGATGCTAGCCACCGTGACCT
CAGGCGTGCAAGAGCAGCTGCACTCAACATTGTCCCAACATCAACTGGTG
CGGCAAAAGCTGTGGCCCTTGTCCTCCCAGCACTCAAAGGCAAACTAAAC
GGCATTGCCCTTCGTGTGCCAACACCAAACGTCTCGGTTGTTGATCTTGT
CGTTCAGGTGTCCAAGAAAACCTTCGCAGAAGAGGTGAACGCCGCCTTCA
GAGAAAGCGCTGACAATGAGCTGAAAGGCATCCTCTCCGTGTGCGACGAG
CCCCTTGTTTCGGTCGACTTCAGGTGCTCTGATGTATCCTCACCGTTGAT
TCATCTCTCACACTTGTCATGGGAGACGACATGGTTA
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