BQ623590

Overview
NameBQ623590
Unique NameBQ623590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length637
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3PC_ORYSJ (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Oryza sativa subsp. japonica GN=GAPC PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 4.708e-31
Identity = 75/191 (39.27%), Postives = 100/191 (52.36%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            E TGVF D+E A  H++ GAKKV+I+AP K D P +V GVN D Y  D  I+SNASCTTNCLAP  KV+   FGII+G MTT H+ T  Q                   NI+P+ST                  G++ RVPT +           K    + + +A + +++ +LKGI+   +E LVS DF
Sbjct:   99 ESTGVFTDKEKAAAHLKGGAKKVVISAPSK-DAPMFVCGVNEDKYTSDIDIVSNASCTTNCLAPLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPTVDVSVVDLTVRIEKAASYDAIKSAIKSASEGKLKGIIGYVEEDLVSTDF 288          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3PC_ORYSI (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Oryza sativa subsp. indica GN=GAPC PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 4.708e-31
Identity = 75/191 (39.27%), Postives = 100/191 (52.36%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            E TGVF D+E A  H++ GAKKV+I+AP K D P +V GVN D Y  D  I+SNASCTTNCLAP  KV+   FGII+G MTT H+ T  Q                   NI+P+ST                  G++ RVPT +           K    + + +A + +++ +LKGI+   +E LVS DF
Sbjct:   99 ESTGVFTDKEKAAAHLKGGAKKVVISAPSK-DAPMFVCGVNEDKYTSDIDIVSNASCTTNCLAPLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPTVDVSVVDLTVRIEKAASYDAIKSAIKSASEGKLKGIIGYVEEDLVSTDF 288          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_SERMA (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Serratia marcescens GN=gap PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 6.149e-31
Identity = 74/191 (38.74%), Postives = 99/191 (51.83%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            E TG+F+  E A KHI AGAKKV++T P K   P +V G N D Y   + I+SNASCTTNCLAP  KV++  FGI++G MTT H+ T  Q                   NI+P+ST                  G+A RVPTPN           K    EE+  A +++A+  +KG+L   ++ +VS DF
Sbjct:   80 EATGIFLTDETARKHITAGAKKVVLTGPSKDATPMFVRGANFDKYAGQD-IVSNASCTTNCLAPLAKVINDNFGIVEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVIPELKGKLTGMAFRVPTPNVSVVDLTVRLEKPATYEEIKKAMKDAAEGSMKGVLGYVEDDVVSTDF 269          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_MASBA (Glyceraldehyde-3-phosphate dehydrogenase OS=Mastigamoeba balamuthi GN=GAPD PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 6.149e-31
Identity = 81/198 (40.91%), Postives = 100/198 (50.51%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSS 592
            E +G F   E A  H Q GAKKVLITAP   D P +V GVN  + K D+ + SNASCTTNCLAP  KV++ KFGI++G MTT HS T  Q                   NI+P+ST                  G++ RVPT N                EE+  A RE+A+ ELKG+L   DE +VS DF    +SS
Sbjct:  101 ESSGAFTTMEKAHLHQQGGAKKVLITAPS-ADAPMFVYGVNHQSLKADQTVFSNASCTTNCLAPLTKVINDKFGIVRGLMTTVHSTTATQKTVDGPSGKAWRDGRAAAGNIIPSSTGAAKAVTAVIPELKGRLTGMSFRVPTLNVSVVDLTAELKTPATYEEICNAVREAANGELKGVLGYTDEQVVSSDFVGEPMSS 297          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_AMAMU (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Amanita muscaria GN=GPD PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 6.149e-31
Identity = 74/191 (38.74%), Postives = 99/191 (51.83%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            E TGVF   E A  H++ GAKK++I+AP   D P +V GVN D Y P   ++SNASCTTNCLAP  KV++ KFGI++G MTT H+ T  Q                   NI+P+ST                  G++ RVPT +           +    +E+  AFRE++   LKGI+   DE +VS DF
Sbjct:   74 ESTGVFTTTEKASAHLKGGAKKIVISAPS-ADAPMFVCGVNLDKYDPKFQVVSNASCTTNCLAPLAKVVNDKFGIVEGLMTTVHATTATQKTVDGPSAKDWRGGRSVNNNIIPSSTGAAKAVGKVIPELNGKLTGLSFRVPTLDVSVVDLVVRIEQSATYDEIKEAFREASKGSLKGIIEYTDEHVVSTDF 263          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P2_CANGA (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Candida glabrata GN=GPD2 PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 6.149e-31
Identity = 76/191 (39.79%), Postives = 102/191 (53.40%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            + TGVF + + A KHI AGAKKV+ITAP     P +VVGVN D Y  D  I+SNASCTTNCLAP  KV+D+ FGI +G MTT HS T  Q                   NI+P+ST                  G+A RVPT +           K+T  +E+    +++++ +LKG+L   ++ +VS DF
Sbjct:   95 DSTGVFKELDTAQKHIDAGAKKVVITAPSS-TAPMFVVGVNEDKYTSDLKIVSNASCTTNCLAPLAKVIDEAFGIEEGLMTTVHSLTATQKTVDGPSHKDWRGGRTASGNIIPSSTGAAKAVGKVLPQLQGKLTGMAFRVPTVDVSVVDLTVKLQKETTYDEIKKVIKQASEGKLKGVLGYTEDAVVSSDF 284          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_RALSO (Glyceraldehyde-3-phosphate dehydrogenase OS=Ralstonia solanacearum GN=gapA PE=3 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 8.031e-31
Identity = 76/192 (39.58%), Postives = 101/192 (52.60%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFR 574
            E TG+F+ +EGA KHI AGAKKV+++AP K D P +V GVN   YK  E IISNASCTTNCLAP  KVL+ K+GI +G MTT H+ T  Q                   NI+P+ST                  G++ RVPT +           K    +E+ A  +  +   LKG+L   ++ +V+ DFR
Sbjct:   96 ESTGIFLTKEGAQKHIDAGAKKVIMSAPSKDDTPMFVYGVNHGTYK-GEAIISNASCTTNCLAPVAKVLNDKWGIKRGLMTTVHAATATQKTVDGPSNKDWRGGRGILENIIPSSTGAAKAVGVVIPQLNKKLTGMSFRVPTSDVSVVDLTVELEKAASYDEICAEMKAQSQGALKGVLGYTEDKVVATDFR 286          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_COCHE (Glyceraldehyde-3-phosphate dehydrogenase OS=Cochliobolus heterostrophus GN=GPD1 PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 8.031e-31
Identity = 77/198 (38.89%), Postives = 102/198 (51.52%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSS 592
            E TGVF   E A  H++ GAKKV+I+AP   D P +V+GVN + YKPD   +SNASCTTNCLAP  KV+  K+ II+G MTT HSYT  Q                   NI+P+ST                  G+A+RVPT N           K    +E+  A +E+++  L GIL   ++ +VS D    + SS
Sbjct:   96 ESTGVFTTTEKAKAHLKGGAKKVVISAPSP-DAPMFVMGVNHETYKPDIEALSNASCTTNCLAPLAKVIHDKYTIIEGLMTTIHSYTATQKVVDGPSAKDWRGGRTAAQNIIPSSTGAAKAVGKVIPELNGKLTGMAMRVPTANVSVVDLTVRIEKGASYDEIKQAVKEASEGSLNGILGYTEDDIVSTDLNGDNRSS 292          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_SCHCO (Glyceraldehyde-3-phosphate dehydrogenase OS=Schizophyllum commune GN=GPD PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.049e-30
Identity = 79/198 (39.90%), Postives = 102/198 (51.52%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSS 592
            E TGVF   E A  H+Q GAKKV+I+AP   D P +VVGVN D Y     +ISNASCTTNCLAP  KV+  K+GI +G MTT H+ T  Q                   NI+P+ST                  G+A RVPT +           K+   +E+ A  +E+++  LKGIL   DE +VS DF  ++ SS
Sbjct:   96 ESTGVFTTVEKASLHLQGGAKKVVISAPS-ADAPMFVVGVNLDKYDSKYQVISNASCTTNCLAPLAKVIHDKYGIAEGLMTTVHATTATQKTVDGPSHKDWRGGRSVNNNIIPSSTGAAKAVGKVIPSLNGRLTGLAFRVPTLDVSVVDLVVRLEKEASYDEIVATVKEASEGPLKGILGFTDESVVSTDFTGANESS 292          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_CITFR (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Citrobacter freundii GN=gap PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.049e-30
Identity = 74/191 (38.74%), Postives = 100/191 (52.36%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            E TG+F+  E A KHI AGAKKV++T P K + P +V G N D Y+  + I+SNASCTTNCLAP  KV++  FGII+G MTT H+ T  Q                   NI+P+ST                  G+A RVPTPN           K    EE+  A + +++  +KG+L   ++ +VS DF
Sbjct:   80 EATGLFLTDETARKHITAGAKKVVLTGPSKDNTPMFVKGANFDKYEGQD-IVSNASCTTNCLAPLAKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTVRLEKAASYEEIKKAIKAASEGPMKGVLGYTEDDVVSTDF 269          
The following BLAST results are available for this feature:
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348
Match NameE-valueIdentityDescription
G3PC_ORYSJ4.708e-3139.27Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_ORYSI4.708e-3139.27Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P_SERMA6.149e-3138.74Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3P_MASBA6.149e-3140.91Glyceraldehyde-3-phosphate dehydrogenase OS=Mastig... [more]
G3P_AMAMU6.149e-3138.74Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3P2_CANGA6.149e-3139.79Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Cand... [more]
G3P_RALSO8.031e-3139.58Glyceraldehyde-3-phosphate dehydrogenase OS=Ralsto... [more]
G3P_COCHE8.031e-3138.89Glyceraldehyde-3-phosphate dehydrogenase OS=Cochli... [more]
G3P_SCHCO1.049e-3039.90Glyceraldehyde-3-phosphate dehydrogenase OS=Schizo... [more]
G3P_CITFR1.049e-3038.74Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00681 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00681 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623590 ID=BQ623590; Name=BQ623590; organism=Citrus sinensis; type=EST; length=637bp
TGAAGGGACAGGAGTGTTTGTAGACAGAGAGGGTGCGGGCAAGCACATTC
AGGCTGGTGCCAAGAAAGTACTTATTACAGCCCCCGGCAAGGGTGACATC
CCAACCTACGTTGTTGGTGTCAATGCGGATGCTTACAAACCAGATGAGCC
CATCATCAGCAATGCTTCTTGCACAACCAACTGCCTTGCCCCATTCGTCA
AGGTTCTTGACCAGAAGTTTGGCATTATCAAGGGAACCATGACCACCACA
CACTCGTACACTGGCGACCAAAGACTACTCGATGCTAGCCACCGTGACCT
CAGGCGTGCAAGAGCAGCTGCACTCAACATTGTCCCAACATCAACTGGTG
CGGCAAAAGCTGTGGCCCTTGTCCTCCCAGCACTCAAAGGCAAACTAAAC
GGCATTGCCCTTCGTGTGCCAACACCAAACGTCTCGGTTGTTGATCTTGT
CGTTCAGGTGTCCAAGAAAACCTTCGCAGAAGAGGTGAACGCCGCCTTCA
GAGAAAGCGCTGACAATGAGCTGAAAGGCATCCTCTCCGTGTGCGACGAG
CCCCTTGTTTCGGTCGACTTCAGGTGCTCTGATGTATCCTCACCGTTGAT
TCATCTCTCACACTTGTCATGGGAGACGACATGGTTA
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