BQ623590

Overview
NameBQ623590
Unique NameBQ623590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length637
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_ASHGO (Glyceraldehyde-3-phosphate dehydrogenase OS=Ashbya gossypii GN=GPD PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.049e-30
Identity = 79/198 (39.90%), Postives = 108/198 (54.55%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSS 592
            + TGVF + + A KHI AGAKKV+ITAP     P +V+GVN + Y   E I+SNASCTTNCLAP  KV+D++FGI +G MTT HS T  Q                   NI+P+ST                  G+A RVPT +          +K+T  +E+ AA + +++ +LKGIL   ++ +VS DF   + SS
Sbjct:   95 DSTGVFKELDSAQKHIDAGAKKVVITAPSS-TAPMFVMGVNEEKYA-GETIVSNASCTTNCLAPLAKVIDEQFGIEEGLMTTVHSLTATQKTVDGPSMKDWRGGRTASGNIIPSSTGAAKAVGKVLPQLNGKLTGMAFRVPTVDVSVVDLTVKLNKETTYDEIKAAIKAASEGKLKGILGYTEDAVVSTDFLGDNNSS 290          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3PC_PHYPA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Physcomitrella patens GN=GAPC PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.049e-30
Identity = 75/198 (37.88%), Postives = 106/198 (53.54%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSS 592
            E TGVF D++ A  H++ GAKKV+I+AP K D P +V+GVN + Y  DE I+SNASCTTNCLAP  KV++ KFGI++G MTT H+ T  Q                   NI+P++T                  G+A RVPT +           K    + +  A +E+++ ++KGIL   ++ +VS DF     SS
Sbjct:  102 ESTGVFTDKDKAAAHLKGGAKKVVISAPSK-DAPMFVMGVNENKYS-DEDIVSNASCTTNCLAPLAKVINDKFGILEGLMTTVHATTATQKTVDGPSSKDWRGGRSAATNIIPSATGAAKAVGKVLPELNGKLTGMAFRVPTTDVSVVDLTVRLEKPASYDAIKTAIKEASEGQMKGILGYTEDDVVSTDFITDSRSS 297          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3PC_CHLRE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Chlamydomonas reinhardtii GN=GAPC PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.049e-30
Identity = 79/192 (41.15%), Postives = 102/192 (53.12%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKP-DEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            E TGVF D   A  H+  GAKKV+ITAP   D P YV+GVN + Y P  + IISNASCTTNCLAP  KV++ KFGI +G MTT H+ T  Q                   NI+P+ST                  G+A RVPT +           K T  E++  A +E+++ E+KG+L+  DE +VS DF
Sbjct:   98 ESTGVFTDIAKATAHLTGGAKKVIITAPSN-DAPMYVMGVNHEKYNPATDHIISNASCTTNCLAPLAKVVNSKFGIKEGLMTTVHATTATQKTVDGPSKKDWRGGRAVNGNIIPSSTGAAKAVGKVLPELKGKLTGMAFRVPTNDVSVVDLTVTLEKATTYEDIMKALKEASEGEMKGVLAYTDEDVVSSDF 288          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_CRIGR (Glyceraldehyde-3-phosphate dehydrogenase OS=Cricetulus griseus GN=GAPDH PE=2 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 1.370e-30
Identity = 75/198 (37.88%), Postives = 99/198 (50.00%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSS 592
            E TGVF   E AG H++ GAK+V+I+AP   D P +V+GVN D Y     I+SNASCTTNCLAP  KV+   FGI++G MTT H+ T  Q                   NI+P ST                  G+A RVPTPN           K    E++    +++++  LKGIL   ++ +VS DF     SS
Sbjct:   95 ESTGVFTTMEKAGAHLKGGAKRVIISAPS-ADAPMFVMGVNQDKYDNSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKPAKYEDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSDSHSS 291          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_BRUMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Brugia malayi GN=G3PD PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.370e-30
Identity = 82/208 (39.42%), Postives = 107/208 (51.44%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAY-KPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSSPLIHLSHLS 619
            E TGVF   + A  H++ GAKKV+I+AP   D P +V+GVN D Y K +  IISNASCTTNCLAP  KV+  KFGII+G MTT H+ T  Q                   NI+P ST                  G+A RVPTP+           K    +E+ AA +E+A+  +KGIL   ++ +VS DF     SS    L+ +S
Sbjct:  101 ESTGVFTTTDKASAHLKGGAKKVIISAPS-ADAPMFVMGVNNDMYDKANNHIISNASCTTNCLAPLAKVIHDKFGIIEGLMTTVHATTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIPGLNGKLTGMANRVPTPDVSVVDLTCRLQKGATMDEIKAAVKEAANGPMKGILEYTEDQVVSTDFTGDTHSSIFDSLACIS 307          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P1_ESCVU (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Escherichia vulneris GN=gap PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.370e-30
Identity = 73/191 (38.22%), Postives = 99/191 (51.83%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            E TG+F+  E A KHI AGAKKV++T P K + P +V G N D Y   + I+SNASCTTNCLAP  KV++  FGI++G MTT H+ T  Q                   NI+P+ST                  G+A RVPTPN           K    EE+  A + +++  +KG+L   ++ +VS DF
Sbjct:   80 EATGIFLTDETARKHITAGAKKVVLTGPSKDNTPMFVRGANFDTYAGQD-IVSNASCTTNCLAPLAKVINDNFGIVEGLMTTVHATTATQKTVDGPSHKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTVRLEKAASYEEIKKAIKAASEGAMKGVLGYTEDDVVSTDF 269          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_MESAU (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Mesocricetus auratus GN=GAPDH PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.789e-30
Identity = 75/198 (37.88%), Postives = 99/198 (50.00%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSS 592
            E TGVF   E AG H++ GAK+V+I+AP   D P +V+GVN D Y     I+SNASCTT CLAP  KV+   FGI+KG MTT H+ T  Q                   NI+P ST                  G+A RVPTPN           K    E++    +++++  LKGIL   ++ +VS DF+    SS
Sbjct:   85 ESTGVFTTMEKAGAHLKGGAKRVIISAPS-ADAPMFVMGVNHDKYDNSLKIVSNASCTTTCLAPLAKVIHDNFGIVKGLMTTVHAITATQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKAAKYEDIKKVVKQASEGPLKGILGYTEDQVVSCDFKSDSHSS 281          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_CHLMU (Glyceraldehyde-3-phosphate dehydrogenase OS=Chlamydia muridarum GN=gap PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.789e-30
Identity = 78/199 (39.20%), Postives = 104/199 (52.26%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKP-DEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSS 592
            E TG+FV+++ A KH+ +GAK+VLITAP KGD+PT+V+GVN   + P ++ IISNASCTTNCLAP  KVL   FGI +G MTT H+ T  Q                   NI+P ST                  G+A RVP  +          S  T  E V  A + +A   ++ I+   +E +VS DF   + SS
Sbjct:   94 ESTGLFVNKDDAAKHLDSGAKRVLITAPAKGDVPTFVMGVNHQKFDPANDVIISNASCTTNCLAPLAKVLLDNFGIEEGLMTTVHAATATQSVVDGPSRKDWRGGRGAFQNIIPASTGAAKAVGLCLPELKGKLTGMAFRVPVADVSVVDLTVKLSSATTYEAVCEAVKHAASTSMRNIMHYTEEAVVSSDFIGCEYSS 292          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_ONCVO (Glyceraldehyde 3-phosphate-dehydrogenase OS=Onchocerca volvulus PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.337e-30
Identity = 79/192 (41.15%), Postives = 100/192 (52.08%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAY-KPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            E TGVF   E A  H++ GAKKV+I+AP   D P +V+GVN D Y K +  IISNASCTTNCLAP  KV+  KFGII+G MTT H+ T  Q                   NI+P ST                  G+A RVPTP+           K    +E+ AA +E+A   +KGIL   ++ +VS DF
Sbjct:  101 ESTGVFTHTEKASAHLKGGAKKVIISAPS-ADAPMFVMGVNNDKYDKANNHIISNASCTTNCLAPLAKVIHDKFGIIEGLMTTVHATTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIPDLNGKLTGMASRVPTPDVSVVDLTCRLQKGASMDEIKAAVKEAAAGPMKGILEYTEDQVVSSDF 291          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_CRYCU (Glyceraldehyde-3-phosphate dehydrogenase OS=Cryptococcus curvatus GN=GPD PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.337e-30
Identity = 74/198 (37.37%), Postives = 103/198 (52.02%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSS 592
            E TGVF   E A  H++ GAKKV+I+AP   D P +V GVN +AYKP+  +ISNASCTTNCLAP  KV+   FGI++G MTT H+ T  Q                   NI+P+ST                  G++ R+PT +           K    +++    +++++ ELKGIL   ++ +VS DF  S  SS
Sbjct:   96 ESTGVFTTIEKASLHLKGGAKKVIISAPS-ADAPMFVCGVNLEAYKPEYEVISNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHATTATQKTVDGPSHKDWRGGRGAAANIIPSSTGAAKAVGKVIPSLNGKLTGMSFRIPTSDVSVVDLVVRLEKGASYDQIKEVIKKASEGELKGILGYTEDEVVSTDFLGSTESS 292          
The following BLAST results are available for this feature:
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348
Match NameE-valueIdentityDescription
G3P_ASHGO1.049e-3039.90Glyceraldehyde-3-phosphate dehydrogenase OS=Ashbya... [more]
G3PC_PHYPA1.049e-3037.88Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_CHLRE1.049e-3041.15Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P_CRIGR1.370e-3037.88Glyceraldehyde-3-phosphate dehydrogenase OS=Cricet... [more]
G3P_BRUMA1.370e-3039.42Glyceraldehyde-3-phosphate dehydrogenase OS=Brugia... [more]
G3P1_ESCVU1.370e-3038.22Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3P_MESAU1.789e-3037.88Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3P_CHLMU1.789e-3039.20Glyceraldehyde-3-phosphate dehydrogenase OS=Chlamy... [more]
G3P_ONCVO2.337e-3041.15Glyceraldehyde 3-phosphate-dehydrogenase OS=Onchoc... [more]
G3P_CRYCU2.337e-3037.37Glyceraldehyde-3-phosphate dehydrogenase OS=Crypto... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00681 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00681 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623590 ID=BQ623590; Name=BQ623590; organism=Citrus sinensis; type=EST; length=637bp
TGAAGGGACAGGAGTGTTTGTAGACAGAGAGGGTGCGGGCAAGCACATTC
AGGCTGGTGCCAAGAAAGTACTTATTACAGCCCCCGGCAAGGGTGACATC
CCAACCTACGTTGTTGGTGTCAATGCGGATGCTTACAAACCAGATGAGCC
CATCATCAGCAATGCTTCTTGCACAACCAACTGCCTTGCCCCATTCGTCA
AGGTTCTTGACCAGAAGTTTGGCATTATCAAGGGAACCATGACCACCACA
CACTCGTACACTGGCGACCAAAGACTACTCGATGCTAGCCACCGTGACCT
CAGGCGTGCAAGAGCAGCTGCACTCAACATTGTCCCAACATCAACTGGTG
CGGCAAAAGCTGTGGCCCTTGTCCTCCCAGCACTCAAAGGCAAACTAAAC
GGCATTGCCCTTCGTGTGCCAACACCAAACGTCTCGGTTGTTGATCTTGT
CGTTCAGGTGTCCAAGAAAACCTTCGCAGAAGAGGTGAACGCCGCCTTCA
GAGAAAGCGCTGACAATGAGCTGAAAGGCATCCTCTCCGTGTGCGACGAG
CCCCTTGTTTCGGTCGACTTCAGGTGCTCTGATGTATCCTCACCGTTGAT
TCATCTCTCACACTTGTCATGGGAGACGACATGGTTA
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