BQ623590

Overview
NameBQ623590
Unique NameBQ623590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length637
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_CRYNE (Glyceraldehyde-3-phosphate dehydrogenase OS=Cryptococcus neoformans GN=GPD PE=3 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 3.986e-30
Identity = 79/199 (39.70%), Postives = 104/199 (52.26%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADN-ELKGILSVCDEPLVSVDFRCSDVSS 592
            E TGVF   E AG H++ GAKKV+I+AP   D P +V GVN DAYKP+  I+SNASCTTNCLAP  KV+   F II+G MTT H+ T  Q                   NI+P+ST                  G++ RVPT +           K    EE+    ++++++ ELKGIL   ++ +VS DF  S  SS
Sbjct:   96 ESTGVFTTTEKAGVHLKGGAKKVVISAPS-ADAPMFVCGVNLDAYKPEYQIVSNASCTTNCLAPLAKVIHDNFTIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGAAANIIPSSTGAAKAVGKVIPSLNGKLTGMSFRVPTSDVSVVDLVCRIEKGASYEEIKNVIKKASESPELKGILGYTEDAVVSTDFIGSTESS 293          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_COLLI (Glyceraldehyde-3-phosphate dehydrogenase OS=Columba livia GN=GAPDH PE=2 SV=3)

HSP 1 Score: 131.339 bits (329), Expect = 3.986e-30
Identity = 75/198 (37.88%), Postives = 99/198 (50.00%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSS 592
            E TGVF   E AG H++ GAK+V+I+AP   D P +V+GVN + Y     I+SNASCTTNCLAP  KV+   FGI++G MTT H+ T  Q                   NI+P ST                  G+A RVPTPN           K    +++    + +AD  LKGIL+  ++ +VS DF     SS
Sbjct:   95 ESTGVFTTMEKAGAHLKGGAKRVIISAPS-ADAPMFVMGVNHEKYDKSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKPAKYDDIKRVVKAAADGPLKGILAYTEDQVVSCDFNGDSHSS 291          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P1_CAEEL (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Caenorhabditis elegans GN=gpd-1 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 3.986e-30
Identity = 74/192 (38.54%), Postives = 100/192 (52.08%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKP-DEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            E TGVF  +E A  H+Q GAKKV+I+AP   D P YVVGVN + Y   ++ ++SNASCTTNCLAP  KV++  FGII+G MTT H+ T  Q                   NI+P ST                  G+A RVPTP+           K    +++    + +AD  +KGIL+  ++ +VS DF
Sbjct:  102 ESTGVFTTKEKASAHLQGGAKKVIISAPS-ADAPMYVVGVNHEKYDASNDHVVSNASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPDVSVVDLTVRLEKPASMDDIKKVVKAAADGPMKGILAYTEDQVVSTDF 292          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_XENLA (Glyceraldehyde-3-phosphate dehydrogenase OS=Xenopus laevis GN=gapdh PE=2 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 5.205e-30
Identity = 73/198 (36.87%), Postives = 101/198 (51.01%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSS 592
            E TGVF   E A  H++ GAK+V+I+AP   D P +VVGVN + Y+    ++SNASCTTNCLAP  KV++  FGI++G MTT H++T  Q                   NI+P ST                  G+A RVPTPN           K    +++ AA + +++  +KGIL    + +VS DF     SS
Sbjct:   95 ESTGVFTTTEKASLHLKGGAKRVVISAPS-ADAPMFVVGVNHEKYENSLKVVSNASCTTNCLAPLAKVINDNFGIVEGLMTTVHAFTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIPELNGKITGMAFRVPTPNVSVVDLTCRLQKPAKYDDIKAAIKTASEGPMKGILGYTQDQVVSTDFNGDTHSS 291          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_LENED (Glyceraldehyde-3-phosphate dehydrogenase OS=Lentinula edodes GN=gpd PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.205e-30
Identity = 75/191 (39.27%), Postives = 97/191 (50.79%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            E TGVF   E A  H++ GAKKV+I+AP   D P YV GVN D+Y     +ISNASCTTNCLAP  KV+  KFGI++  MTT H+ T  Q                   NI+P+ST                  G+A RVPT +           K    +E+ AA +E++   LKGIL   ++ +VS DF
Sbjct:   96 ESTGVFTTIEKASAHLKGGAKKVIISAPS-ADAPMYVCGVNLDSYDSQHAVISNASCTTNCLAPLAKVIHDKFGIVEALMTTVHATTATQKTVDGPSNKDWRGGRSVNGNIIPSSTGAAKAVGKVIPSLNGKLTGLAFRVPTLDVSVVDLVCRTEKSATYDEIKAAVKEASKGPLKGILGYTEDHVVSTDF 285          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_CHICK (Glyceraldehyde-3-phosphate dehydrogenase OS=Gallus gallus GN=GAPDH PE=2 SV=3)

HSP 1 Score: 130.954 bits (328), Expect = 5.205e-30
Identity = 75/198 (37.88%), Postives = 98/198 (49.49%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSS 592
            E TGVF   E AG H++ GAK+V+I+AP   D P +V+GVN + Y     I+SNASCTTNCLAP  KV+   FGI++G MTT H+ T  Q                   NI+P ST                  G+A RVPTPN           K    +++    + +AD  LKGIL   ++ +VS DF     SS
Sbjct:   95 ESTGVFTTMEKAGAHLKGGAKRVIISAPS-ADAPMFVMGVNHEKYDKSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKPAKYDDIKRVVKAAADGPLKGILGYTEDQVVSCDFNGDSHSS 291          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_CLAPU (Glyceraldehyde-3-phosphate dehydrogenase OS=Claviceps purpurea GN=GPD-1 PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 6.799e-30
Identity = 76/198 (38.38%), Postives = 99/198 (50.00%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSS 592
            E TGVF   E A  H+  GAKKV+I+AP   D P YV+GVN   Y     +ISNASCTTNCLAP  KV+  K+ I++G MTT HSYT  Q                   NI+P+ST                  G+++RVPTPN           K    +E+ A  +E+A+  L GIL   ++ +VS D   +  SS
Sbjct:   96 ESTGVFTTTEKAKAHLTGGAKKVIISAPS-ADAPMYVMGVNEKTYDGKADVISNASCTTNCLAPLAKVIHDKYTIVEGLMTTVHSYTATQKTVDGPSGKDWRGGRGAAQNIIPSSTGAAKAVGKVIPDLNGKLTGMSMRVPTPNVSVVDLTVRIEKGATYDEIKATVKEAANGSLAGILGYTEDDIVSSDMNGNTNSS 292          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_AJECA (Glyceraldehyde-3-phosphate dehydrogenase OS=Ajellomyces capsulata GN=GPD PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 6.799e-30
Identity = 73/198 (36.87%), Postives = 100/198 (50.51%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSS 592
            E TGVF   E A  H++ GAKKV+I+AP   D P +V+GVN   Y P   ++SNASCTTNCLAP  KV++  FG+ +G MTT HSYT  Q                   NI+P+ST                  G+++RVPT N           K    +++    +++++ ELKGIL   ++ LVS D      SS
Sbjct:   96 ESTGVFTTTEKASAHLKGGAKKVIISAPS-ADAPMFVMGVNEKTYDPSVNVLSNASCTTNCLAPLAKVINDNFGLTEGLMTTIHSYTATQKTVDGPSSKDWRGGRTAAQNIIPSSTGAAKAVGKVIPSLNGKLTGMSMRVPTANVSVVDLTCKTEKPVTYDQIKQTIKKASEGELKGILGYSEDALVSSDLNGDSRSS 292          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P2_KLULA (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Kluyveromyces lactis GN=GAP2 PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 6.799e-30
Identity = 77/191 (40.31%), Postives = 103/191 (53.93%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            + TGVF + + A KHI AGAKKV+ITAP     P +VVGVN D Y   E I+SNASCTTNCLAP  KV++  FGI +G M+T HS T  Q                   NI+P+ST                  G+A RVPT +          +K+   +E+ A  +++++NELKGIL   ++ +VS DF
Sbjct:   95 DSTGVFKELDSAQKHIDAGAKKVVITAPSS-TAPMFVVGVNEDKYN-GETIVSNASCTTNCLAPLAKVVNNAFGIEEGLMSTIHSITATQKTVDGPSQKDWRGGRTASGNIIPSSTGAAKAVGKVLPELQGKLTGMAFRVPTVDVSVVDLTVKLAKEATYDEIKAVIKKASENELKGILGYTEDAVVSSDF 283          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_MOUSE (Glyceraldehyde-3-phosphate dehydrogenase OS=Mus musculus GN=Gapdh PE=1 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 8.879e-30
Identity = 73/198 (36.87%), Postives = 100/198 (50.51%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSS 592
            E TGVF   E AG H++ GAK+V+I+AP   D P +V+GVN + Y     I+SNASCTTNCLAP  KV+   FGI++G MTT H+ T  Q                   NI+P ST                  G+A RVPTPN           K    +++    +++++  LKGIL   ++ +VS DF  +  SS
Sbjct:   95 ESTGVFTTMEKAGAHLKGGAKRVIISAPS-ADAPMFVMGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKPAKYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSNSHSS 291          
The following BLAST results are available for this feature:
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348
Match NameE-valueIdentityDescription
G3P_CRYNE3.986e-3039.70Glyceraldehyde-3-phosphate dehydrogenase OS=Crypto... [more]
G3P_COLLI3.986e-3037.88Glyceraldehyde-3-phosphate dehydrogenase OS=Columb... [more]
G3P1_CAEEL3.986e-3038.54Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Caen... [more]
G3P_XENLA5.205e-3036.87Glyceraldehyde-3-phosphate dehydrogenase OS=Xenopu... [more]
G3P_LENED5.205e-3039.27Glyceraldehyde-3-phosphate dehydrogenase OS=Lentin... [more]
G3P_CHICK5.205e-3037.88Glyceraldehyde-3-phosphate dehydrogenase OS=Gallus... [more]
G3P_CLAPU6.799e-3038.38Glyceraldehyde-3-phosphate dehydrogenase OS=Clavic... [more]
G3P_AJECA6.799e-3036.87Glyceraldehyde-3-phosphate dehydrogenase OS=Ajello... [more]
G3P2_KLULA6.799e-3040.31Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Kluy... [more]
G3P_MOUSE8.879e-3036.87Glyceraldehyde-3-phosphate dehydrogenase OS=Mus mu... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00681 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00681 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623590 ID=BQ623590; Name=BQ623590; organism=Citrus sinensis; type=EST; length=637bp
TGAAGGGACAGGAGTGTTTGTAGACAGAGAGGGTGCGGGCAAGCACATTC
AGGCTGGTGCCAAGAAAGTACTTATTACAGCCCCCGGCAAGGGTGACATC
CCAACCTACGTTGTTGGTGTCAATGCGGATGCTTACAAACCAGATGAGCC
CATCATCAGCAATGCTTCTTGCACAACCAACTGCCTTGCCCCATTCGTCA
AGGTTCTTGACCAGAAGTTTGGCATTATCAAGGGAACCATGACCACCACA
CACTCGTACACTGGCGACCAAAGACTACTCGATGCTAGCCACCGTGACCT
CAGGCGTGCAAGAGCAGCTGCACTCAACATTGTCCCAACATCAACTGGTG
CGGCAAAAGCTGTGGCCCTTGTCCTCCCAGCACTCAAAGGCAAACTAAAC
GGCATTGCCCTTCGTGTGCCAACACCAAACGTCTCGGTTGTTGATCTTGT
CGTTCAGGTGTCCAAGAAAACCTTCGCAGAAGAGGTGAACGCCGCCTTCA
GAGAAAGCGCTGACAATGAGCTGAAAGGCATCCTCTCCGTGTGCGACGAG
CCCCTTGTTTCGGTCGACTTCAGGTGCTCTGATGTATCCTCACCGTTGAT
TCATCTCTCACACTTGTCATGGGAGACGACATGGTTA
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