BQ623590

Overview
NameBQ623590
Unique NameBQ623590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length637
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3PA_GUITH (Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic OS=Guillardia theta GN=GAPC1 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.583e-29
Identity = 78/198 (39.39%), Postives = 99/198 (50.00%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSS 592
            E TGVF+  E A  HI AG KKV+ +AP K D  T V+GVNA+ YK     IS ASCTTN LAP VK ++ K+GI +G MTT H+ T  Q                   NI+P+ST                  G+A RVPT +          +K    EE+ A  +  A+ ++KG L   DEPLVS DF    +SS
Sbjct:  142 ESTGVFLTAEKAQPHIDAGVKKVIFSAPAKDDSLTVVMGVNAEDYKGQTDFISCASCTTNGLAPLVKCINDKWGIEEGLMTTIHAMTATQAVVDSSSRKDWRGGRAASGNIIPSSTGAAKAVAKVIPAVKGKLTGMAFRVPTIDVSVVDLTCRLAKDATYEEICAEVKRRANGDMKGFLGYTDEPLVSTDFETEPISS 339          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P3_YEAST (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Saccharomyces cerevisiae GN=TDH3 PE=1 SV=3)

HSP 1 Score: 128.642 bits (322), Expect = 2.583e-29
Identity = 74/191 (38.74%), Postives = 101/191 (52.88%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            + TGVF + + A KHI AGAKKV+ITAP     P +V+GVN + Y  D  I+SNASCTTNCLAP  KV++  FGI +G MTT HS T  Q                   NI+P+ST                  G+A RVPT +          +K+T  +E+    + +A+ +LKG+L   ++ +VS DF
Sbjct:   95 DSTGVFKELDTAQKHIDAGAKKVVITAPSS-TAPMFVMGVNEEKYTSDLKIVSNASCTTNCLAPLAKVINDAFGIEEGLMTTVHSLTATQKTVDGPSHKDWRGGRTASGNIIPSSTGAAKAVGKVLPELQGKLTGMAFRVPTVDVSVVDLTVKLNKETTYDEIKKVVKAAAEGKLKGVLGYTEDAVVSSDF 284          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P3_CAEEL (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Caenorhabditis elegans GN=gpd-3 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.583e-29
Identity = 77/201 (38.31%), Postives = 104/201 (51.74%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYK-PDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSSPL 598
            E TGVF   E A  H++ GAKKV+I+AP   D P +VVGVN + Y   ++ IISNASCTTNCLAP  KV++  FGII+G MTT H+ T  Q                   NI+P ST                  G+A RVPTP+           K    +++    + +AD  +KGIL+  ++ +VS DF  SD +S +
Sbjct:  102 ESTGVFTTIEKANAHLKGGAKKVIISAPS-ADAPMFVVGVNHEKYDHANDHIISNASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPDVSVVDLTARLEKPASLDDIKKVIKAAADGPMKGILAYTEDQVVSTDF-VSDTNSSI 300          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P2_YEAST (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Saccharomyces cerevisiae GN=TDH2 PE=1 SV=3)

HSP 1 Score: 128.642 bits (322), Expect = 2.583e-29
Identity = 74/191 (38.74%), Postives = 101/191 (52.88%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            + TGVF + + A KHI AGAKKV+ITAP     P +V+GVN + Y  D  I+SNASCTTNCLAP  KV++  FGI +G MTT HS T  Q                   NI+P+ST                  G+A RVPT +          +K+T  +E+    + +A+ +LKG+L   ++ +VS DF
Sbjct:   95 DSTGVFKELDTAQKHIDAGAKKVVITAPSS-TAPMFVMGVNEEKYTSDLKIVSNASCTTNCLAPLAKVINDAFGIEEGLMTTVHSMTATQKTVDGPSHKDWRGGRTASGNIIPSSTGAAKAVGKVLPELQGKLTGMAFRVPTVDVSVVDLTVKLNKETTYDEIKKVVKAAAEGKLKGVLGYTEDAVVSSDF 284          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P2_TRIKO (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Trichoderma koningii GN=gpd2 PE=1 SV=3)

HSP 1 Score: 128.642 bits (322), Expect = 2.583e-29
Identity = 73/190 (38.42%), Postives = 96/190 (50.53%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVD 568
            E TGVF   E A  H+  GAKKV+I+AP   D P YV+GVN   Y     +ISNASCTTNCLAP  KV++  +GI++G MTT HSYT  Q                   NI+P+ST                  G+++RVPT N           K    EE+    +++AD  LKG+L+   + +VS D
Sbjct:   97 ESTGVFTTTEKAKAHLVGGAKKVIISAPS-ADAPMYVMGVNESDYDGSADVISNASCTTNCLAPLAKVINDNYGIVEGLMTTVHSYTATQKTVDGPSAKDWRGGRGAAQNIIPSSTGAAKAVGKVIPALNGKLTGMSIRVPTANVSVVDLTVRIEKGASYEEITETIKKAADGPLKGVLAYTGDDVVSSD 285          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P2_CAEEL (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Caenorhabditis elegans GN=gpd-2 PE=1 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 2.583e-29
Identity = 77/201 (38.31%), Postives = 104/201 (51.74%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYK-PDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSSPL 598
            E TGVF   E A  H++ GAKKV+I+AP   D P +VVGVN + Y   ++ IISNASCTTNCLAP  KV++  FGII+G MTT H+ T  Q                   NI+P ST                  G+A RVPTP+           K    +++    + +AD  +KGIL+  ++ +VS DF  SD +S +
Sbjct:  102 ESTGVFTTIEKANAHLKGGAKKVIISAPS-ADAPMFVVGVNHEKYDHANDHIISNASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPDVSVVDLTARLEKPASLDDIKKVIKAAADGPMKGILAYTEDQVVSTDF-VSDTNSSI 300          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_ASPOR (Glyceraldehyde-3-phosphate dehydrogenase OS=Aspergillus oryzae GN=gpdA PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.374e-29
Identity = 73/191 (38.22%), Postives = 98/191 (51.31%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFR-ESADNELKGILSVCDEPLVSVD 568
            E TGVF   E A  H++ GAKKV+I+AP   D P +V+GVN   YK D  ++SNASCTTNCLAP  KV++  FG+++G MTT HSYT  Q                   NI+P+ST                  G+++RVPT N           K    E++    +  S + ELKGIL   ++ +VS D
Sbjct:   97 ESTGVFTTTEKASAHLKGGAKKVIISAPS-ADAPMFVMGVNNKEYKTDINVLSNASCTTNCLAPLAKVINDNFGLVEGLMTTVHSYTATQKTVDAPSAKDWRGGRTAAQNIIPSSTGAAKAVGKVIPSLNGKLTGMSMRVPTANVSVVDLTCRTEKAVTYEDIKKTIKAASEEGELKGILGYTEDDIVSTD 286          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3PG_LEIME (Glyceraldehyde-3-phosphate dehydrogenase, glycosomal OS=Leishmania mexicana GN=GAPG PE=1 SV=3)

HSP 1 Score: 128.257 bits (321), Expect = 3.374e-29
Identity = 76/193 (39.38%), Postives = 100/193 (51.81%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKP-DEPIISNASCTTNCLAPFVKVL-DQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            E TG+F D+  A  HI+ GAKKV+I+AP  G   T V+GVN   Y P    ++SNASCTTNCLAP V VL  + FGI  G MTT HSYT  Q                   NI+P++T                  G++ RVPTP+          ++ T  +E++ A +++A   +KGIL   DE LVS DF
Sbjct:  110 ESTGLFTDKLKAEGHIKGGAKKVVISAPASGGAKTIVMGVNQHEYSPASHHVVSNASCTTNCLAPIVHVLTKENFGIETGLMTTIHSYTATQKTVDGVSLKDWRGGRAAAVNIIPSTTGAAKAVGMVIPSTKGKLTGMSFRVPTPDVSVVDLTFRATRDTSIQEIDKAIKKAAQTYMKGILGFTDEELVSADF 302          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3PG_CRIFA (Glyceraldehyde-3-phosphate dehydrogenase, glycosomal OS=Crithidia fasciculata GN=GAPDG PE=3 SV=3)

HSP 1 Score: 128.257 bits (321), Expect = 3.374e-29
Identity = 75/193 (38.86%), Postives = 101/193 (52.33%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKP-DEPIISNASCTTNCLAPFVKVL-DQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            E TG+F D+  A  H++ GAKKV+I+AP  G   T V+GVN   Y P    ++SNASCTTNCLAP V VL  + FGI  G MTT HSYT  Q                   NI+P++T                  G++ RVPTP+          ++ T  +E++AA ++++   +KGIL   DE LVS DF
Sbjct:  110 ESTGLFTDKAKAEGHVKGGAKKVVISAPASGGAKTIVMGVNQHEYNPATHHVVSNASCTTNCLAPIVHVLTKENFGIETGLMTTIHSYTATQKTVDGVSIKDWRGGRAAAVNIIPSTTGAAKAVGMVIPSTKGKLTGMSFRVPTPDVSVVDLTFRATRDTSIQEIDAALKKASQTYMKGILGFTDEELVSSDF 302          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P1_TRIKO (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Trichoderma koningii GN=gpd1 PE=1 SV=3)

HSP 1 Score: 128.257 bits (321), Expect = 3.374e-29
Identity = 76/198 (38.38%), Postives = 101/198 (51.01%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSS 592
            E TGVF   E A  H + GAKKV+I+AP   D P YV+GVN D Y     +ISNASCTTNCLAP  K L+ KF I++G MT  H+YT  Q                   N++P+ST                  G+++RVPT N          +K    +EV AA +E+++  LKGIL+  ++ +VS D      SS
Sbjct:   96 ESTGVFTTTEKASAHFKGGAKKVIISAPS-ADAPMYVMGVNEDTYAGAN-VISNASCTTNCLAPLAKTLNDKFTIVEGLMTAIHAYTASQKTVDGPSSKDWRGGRAAAQNLIPSSTGAAKAVGKVIPELAGKVTGMSVRVPTVNVSLVDFTVRFAKDVTYDEVKAAIKEASEGPLKGILAYTEDDIVSTDILTDPHSS 291          
The following BLAST results are available for this feature:
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348
Match NameE-valueIdentityDescription
G3PA_GUITH2.583e-2939.39Glyceraldehyde-3-phosphate dehydrogenase, chloropl... [more]
G3P3_YEAST2.583e-2938.74Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Sacc... [more]
G3P3_CAEEL2.583e-2938.31Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Caen... [more]
G3P2_YEAST2.583e-2938.74Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Sacc... [more]
G3P2_TRIKO2.583e-2938.42Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Tric... [more]
G3P2_CAEEL2.583e-2938.31Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Caen... [more]
G3P_ASPOR3.374e-2938.22Glyceraldehyde-3-phosphate dehydrogenase OS=Asperg... [more]
G3PG_LEIME3.374e-2939.38Glyceraldehyde-3-phosphate dehydrogenase, glycosom... [more]
G3PG_CRIFA3.374e-2938.86Glyceraldehyde-3-phosphate dehydrogenase, glycosom... [more]
G3P1_TRIKO3.374e-2938.38Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Tric... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00681 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00681 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623590 ID=BQ623590; Name=BQ623590; organism=Citrus sinensis; type=EST; length=637bp
TGAAGGGACAGGAGTGTTTGTAGACAGAGAGGGTGCGGGCAAGCACATTC
AGGCTGGTGCCAAGAAAGTACTTATTACAGCCCCCGGCAAGGGTGACATC
CCAACCTACGTTGTTGGTGTCAATGCGGATGCTTACAAACCAGATGAGCC
CATCATCAGCAATGCTTCTTGCACAACCAACTGCCTTGCCCCATTCGTCA
AGGTTCTTGACCAGAAGTTTGGCATTATCAAGGGAACCATGACCACCACA
CACTCGTACACTGGCGACCAAAGACTACTCGATGCTAGCCACCGTGACCT
CAGGCGTGCAAGAGCAGCTGCACTCAACATTGTCCCAACATCAACTGGTG
CGGCAAAAGCTGTGGCCCTTGTCCTCCCAGCACTCAAAGGCAAACTAAAC
GGCATTGCCCTTCGTGTGCCAACACCAAACGTCTCGGTTGTTGATCTTGT
CGTTCAGGTGTCCAAGAAAACCTTCGCAGAAGAGGTGAACGCCGCCTTCA
GAGAAAGCGCTGACAATGAGCTGAAAGGCATCCTCTCCGTGTGCGACGAG
CCCCTTGTTTCGGTCGACTTCAGGTGCTCTGATGTATCCTCACCGTTGAT
TCATCTCTCACACTTGTCATGGGAGACGACATGGTTA
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