BQ623590

Overview
NameBQ623590
Unique NameBQ623590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length637
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P1_CANGA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Candida glabrata GN=GPD1 PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.374e-29
Identity = 75/191 (39.27%), Postives = 99/191 (51.83%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            E TGVF  ++ A KHI AGAKKV+IT P     P +V GVN D Y  D  +ISNASCTTNCLAP  KVL   FGI +  M+T HS T  Q                   NI+P+ST                  G+A RVPT +          +K    +E+ AA +++++ E+KGIL+  ++ +VS DF
Sbjct:   95 EATGVFTAKDLAEKHITAGAKKVVITGPS-ATAPMFVKGVNDDKYTSDVTVISNASCTTNCLAPLAKVLQDNFGIEEALMSTVHSQTATQKTVDGPSKKDWRGGRTASANIIPSSTGAAKAVTKVLPELEGKLTGMAFRVPTVDVSVVDLTVRFAKDVTYDEIKAAIKKASEGEMKGILAYTEDAVVSTDF 284          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_MYCGE (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycoplasma genitalium GN=gapA PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 4.407e-29
Identity = 78/198 (39.39%), Postives = 97/198 (48.99%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGD-IPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSS 592
            E TG FV  EGA  H++AGAK+V+I+AP K   I T V  VN      D+ IIS ASCTTNCLAP V VL++ FGI+ GTM T H+YT DQ                  NIVPT+T                 NG++LRVP              K    E+VN A +  A    K     C++P+VS D   S+  S
Sbjct:  100 ESTGRFVSEEGASLHLKAGAKRVIISAPAKEKTIRTVVYNVNHKTISSDDKIISAASCTTNCLAPLVHVLEKNFGIVYGTMLTVHAYTADQRLQDAPHNDLRRARAAAVNIVPTTTGAAKAIGLVVPEANGKLNGMSLRVPVLTGSIVELSVVLEKSPSVEQVNQAMKRFASASFK----YCEDPIVSSDVVSSEYGS 293          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_STRAU (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptomyces aureofaciens GN=gap PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.755e-29
Identity = 77/198 (38.89%), Postives = 97/198 (48.99%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPD-EPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSS 592
            E TG F   + A  H+ AGAKKVL++AP  G   T   GVN DAY PD   I+SNASCTTN LAP  KVLD   GI  G MTT H+YT +Q                  NIVPT+T                 +G ++RVP P           ++    +EV  A+R +A   L G+L   ++PLVS D   +  SS
Sbjct:   95 EATGRFTSAKAARAHLDAGAKKVLVSAPADGADITLAFGVNTDAYDPDLHTIVSNASCTTNALAPLAKVLDDLAGIEHGFMTTVHAYTQEQNLQDGPHRDPRRARAAAVNIVPTTTGAAKAIGLVLPNLDGKLSGDSIRVPVPVGSIVELNTTVARDVTRDEVLDAYRAAAQGPLAGVLEYSEDPLVSSDITGNPASS 292          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_NEUCR (Glyceraldehyde 3-phosphate-dehydrogenase OS=Neurospora crassa GN=gpd-1 PE=2 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 5.755e-29
Identity = 73/198 (36.87%), Postives = 99/198 (50.00%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSS 592
            E TGVF   E A  H++ GAKKV+I+AP   D P YV+GVN + Y     +ISNASCTTNCLAP  KV+   F I++G MTT HSYT  Q                   NI+P+ST                  G+A+RVPT N           K    +E+    +++++  L GIL+  ++ +VS D   +  SS
Sbjct:   96 ESTGVFTTTEKASAHLKGGAKKVIISAPS-ADAPMYVMGVNNETYDGSADVISNASCTTNCLAPLAKVIHDNFTIVEGLMTTVHSYTATQKTVDGPSAKDWRGGRTAAQNIIPSSTGAAKAVGKVIPDLNGKLTGMAMRVPTANVSVVDLTARIEKGATYDEIKEVIKKASEGPLAGILAYTEDEVVSSDMNGNPASS 292          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_HUMAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Homo sapiens GN=GAPDH PE=1 SV=3)

HSP 1 Score: 127.102 bits (318), Expect = 7.517e-29
Identity = 74/198 (37.37%), Postives = 97/198 (48.99%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSS 592
            E TGVF   E AG H+Q GAK+V+I+AP   D P +V+GVN + Y     IISNASCTTNCLAP  KV+   FGI++G MTT H+ T  Q                   NI+P ST                  G+A RVPT N           K    +++    +++++  LKGIL   +  +VS DF     SS
Sbjct:   97 ESTGVFTTMEKAGAHLQGGAKRVIISAPS-ADAPMFVMGVNHEKYDNSLKIISNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGALQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTANVSVVDLTCRLEKPAKYDDIKKVVKQASEGPLKGILGYTEHQVVSSDFNSDTHSS 293          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3PT_MOUSE (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Mus musculus GN=Gapdhs PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 7.517e-29
Identity = 75/199 (37.69%), Postives = 101/199 (50.75%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDE-PIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSS 592
            E TGV++  E A  HI +GA++V++TAP   D P +V+GVN   Y P    I+SNASCTTNCLAP  KV+ + FGI++G MTT HSYT  Q                   NI+P+ST                  G+A RVPTPN          +K      +  A + +A   L GIL+  ++ +VS DF  +  SS
Sbjct:  200 ECTGVYLSIEAASAHISSGARRVVVTAPSP-DAPMFVMGVNEKDYNPGSMTIVSNASCTTNCLAPLAKVIHENFGIVEGLMTTVHSYTATQKTVDGPSKKDWRGGRGAHQNIIPSSTGAAKAVGKVIPELKGKLTGMAFRVPTPNVSVVDLTCRLAKPASYSAITEAVKAAAKGPLAGILAYTEDQVVSTDFNGNPHSS 397          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_PSEAE (Glyceraldehyde-3-phosphate dehydrogenase OS=Pseudomonas aeruginosa GN=gap PE=3 SV=3)

HSP 1 Score: 126.716 bits (317), Expect = 9.817e-29
Identity = 76/204 (37.25%), Postives = 102/204 (50.00%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSSPLIHLSH 613
            E TG+F  R+ A  H+QAGA KVLI+APGK    T V GVN +  +    I+SNASCTTNCLAP  +VL ++ GI  G MTT H+YT DQ                  +++PT T                  G+A+RVP  N          ++ T  +EVN   RE+++     +L    +PLVSVDF   D  S +   +H
Sbjct:   98 ECTGLFTSRDKAAAHLQAGAGKVLISAPGKDVEATVVYGVNHEVLRASHRIVSNASCTTNCLAPVAQVLHRELGIEHGLMTTIHAYTNDQNLSDVYHPDLYRARSATQSMIPTKTGAAEAVGLVLPELAGKLTGLAVRVPVINVSLVDLTVQVARDTSVDEVNRLLREASEG--SPVLGYNTQPLVSVDFN-HDPRSSIFDANH 298          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_MELGA (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Meleagris gallopavo GN=GAPDH PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 9.817e-29
Identity = 73/198 (36.87%), Postives = 96/198 (48.48%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSS 592
            E TGVF   E AG H++ GAK+V+I+AP   D P +V+GVN + Y     I+SNA CTTNCLAP  KV+   FGI++G MTT H+ T  Q                   NI+P ST                  G+A  VPTPN           K    +++    + +AD  LKGIL   ++ +VS DF     SS
Sbjct:    6 ESTGVFTTMEKAGAHLKGGAKRVIISAPS-ADAPMFVMGVNHEKYDKSLKIVSNALCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPFGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFHVPTPNVSVVDLTCRLEKPAKYDDIKRVVKAAADGPLKGILGYTEDQVVSCDFNGDSHSS 202          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P2_STAAR (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus aureus (strain MRSA252) GN=gapA2 PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 9.817e-29
Identity = 80/199 (40.20%), Postives = 102/199 (51.26%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGD-IPTYVVGVNADAYKPDE-PIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSS 592
            + TG F   + A  HI+AGAKKVL+T P KG  +   V GVN D    +   I SNASCTTNC+ P  KVL+ +FGI+ G MTT H+ T DQ                  +I+PTST                 +G+ALRVPT N           K+  AEEVN AF  +    L+GI+ V  +PLVSVDF  +  S+
Sbjct:   95 DATGKFNHGDKAIAHIKAGAKKVLLTGPSKGGHVQMVVKGVNDDQLDIEAFDIFSNASCTTNCIGPVAKVLNNQFGIVNGLMTTVHAITNDQKNIDNPHKDLRRARSCNESIIPTSTGAAKALKEVLPELEGKLHGMALRVPTKNVSLVDLVVDLEKEVTAEEVNQAFENAG---LEGIIEVEHQPLVSVDFNTNPHSA 290          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P2_CAEBR (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Caenorhabditis briggsae GN=gpd-2 PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 9.817e-29
Identity = 76/201 (37.81%), Postives = 103/201 (51.24%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYK-PDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSSPL 598
            E TGVF   E A  H++ GAKKV+I+AP   D P +VVGVN + Y   ++ IISNASCTTNCLAP  KV++  FGII+G MTT H+ T  Q                   NI+P ST                  G+A RVPTP+           K    +++    + +A+  LKG+L+  ++ +VS DF  SD  S +
Sbjct:  102 ESTGVFTTIEKANAHLKGGAKKVIISAPS-ADAPMFVVGVNHEKYDHANDHIISNASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPDVSVVDLTARLEKPASLDDIKRVIKAAAEGPLKGVLAYTEDQVVSTDF-VSDTHSSI 300          
The following BLAST results are available for this feature:
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348
Match NameE-valueIdentityDescription
G3P1_CANGA3.374e-2939.27Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Cand... [more]
G3P_MYCGE4.407e-2939.39Glyceraldehyde-3-phosphate dehydrogenase OS=Mycopl... [more]
G3P_STRAU5.755e-2938.89Glyceraldehyde-3-phosphate dehydrogenase OS=Strept... [more]
G3P_NEUCR5.755e-2936.87Glyceraldehyde 3-phosphate-dehydrogenase OS=Neuros... [more]
G3P_HUMAN7.517e-2937.37Glyceraldehyde-3-phosphate dehydrogenase OS=Homo s... [more]
G3PT_MOUSE7.517e-2937.69Glyceraldehyde-3-phosphate dehydrogenase, testis-s... [more]
G3P_PSEAE9.817e-2937.25Glyceraldehyde-3-phosphate dehydrogenase OS=Pseudo... [more]
G3P_MELGA9.817e-2936.87Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3P2_STAAR9.817e-2940.20Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Stap... [more]
G3P2_CAEBR9.817e-2937.81Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Caen... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00681 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00681 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623590 ID=BQ623590; Name=BQ623590; organism=Citrus sinensis; type=EST; length=637bp
TGAAGGGACAGGAGTGTTTGTAGACAGAGAGGGTGCGGGCAAGCACATTC
AGGCTGGTGCCAAGAAAGTACTTATTACAGCCCCCGGCAAGGGTGACATC
CCAACCTACGTTGTTGGTGTCAATGCGGATGCTTACAAACCAGATGAGCC
CATCATCAGCAATGCTTCTTGCACAACCAACTGCCTTGCCCCATTCGTCA
AGGTTCTTGACCAGAAGTTTGGCATTATCAAGGGAACCATGACCACCACA
CACTCGTACACTGGCGACCAAAGACTACTCGATGCTAGCCACCGTGACCT
CAGGCGTGCAAGAGCAGCTGCACTCAACATTGTCCCAACATCAACTGGTG
CGGCAAAAGCTGTGGCCCTTGTCCTCCCAGCACTCAAAGGCAAACTAAAC
GGCATTGCCCTTCGTGTGCCAACACCAAACGTCTCGGTTGTTGATCTTGT
CGTTCAGGTGTCCAAGAAAACCTTCGCAGAAGAGGTGAACGCCGCCTTCA
GAGAAAGCGCTGACAATGAGCTGAAAGGCATCCTCTCCGTGTGCGACGAG
CCCCTTGTTTCGGTCGACTTCAGGTGCTCTGATGTATCCTCACCGTTGAT
TCATCTCTCACACTTGTCATGGGAGACGACATGGTTA
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