BQ623590

Overview
NameBQ623590
Unique NameBQ623590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length637
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: E4PD_ECO7I (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=epd PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.158e-27
Identity = 72/189 (38.10%), Postives = 91/189 (48.15%), Query Frame = 2
Query:    8 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            TGV+  RE    HI AGAKKVL + PG  D+  T V GVN D  + +  I+SNASCTTNC+ P +K+LD  +GI  GT+TT HS   DQ                  +I+P  T                   IA+RVPT N           K   A EVN   +++A     GI+   + PLVSVDF
Sbjct:  100 TGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAEHRIVSNASCTTNCIIPVIKLLDDAYGIESGTVTTIHSAMHDQQVIDAYHPDLRRTRAASQSIIPVDTKLAAGITRFFPQFNDRFEAIAVRVPTINVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIVDYTELPLVSVDF 288          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: E4PD_ECO5E (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=epd PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.158e-27
Identity = 72/189 (38.10%), Postives = 91/189 (48.15%), Query Frame = 2
Query:    8 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            TGV+  RE    HI AGAKKVL + PG  D+  T V GVN D  + +  I+SNASCTTNC+ P +K+LD  +GI  GT+TT HS   DQ                  +I+P  T                   IA+RVPT N           K   A EVN   +++A     GI+   + PLVSVDF
Sbjct:  100 TGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAEHRIVSNASCTTNCIIPVIKLLDDAYGIESGTVTTIHSAMHDQQVIDAYHPDLRRTRAASQSIIPVDTKLAAGITRFFPQFNDRFEAIAVRVPTINVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIVDYTELPLVSVDF 288          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: E4PD_ECO57 (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli O157:H7 GN=epd PE=3 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 3.158e-27
Identity = 72/189 (38.10%), Postives = 91/189 (48.15%), Query Frame = 2
Query:    8 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            TGV+  RE    HI AGAKKVL + PG  D+  T V GVN D  + +  I+SNASCTTNC+ P +K+LD  +GI  GT+TT HS   DQ                  +I+P  T                   IA+RVPT N           K   A EVN   +++A     GI+   + PLVSVDF
Sbjct:  100 TGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAEHRIVSNASCTTNCIIPVIKLLDDAYGIESGTVTTIHSAMHDQQVIDAYHPDLRRTRAASQSIIPVDTKLAAGITRFFPQFNDRFEAIAVRVPTINVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIVDYTELPLVSVDF 288          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: E4PD_ECO55 (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli (strain 55989 / EAEC) GN=epd PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.158e-27
Identity = 72/189 (38.10%), Postives = 91/189 (48.15%), Query Frame = 2
Query:    8 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            TGV+  RE    HI AGAKKVL + PG  D+  T V GVN D  + +  I+SNASCTTNC+ P +K+LD  +GI  GT+TT HS   DQ                  +I+P  T                   IA+RVPT N           K   A EVN   +++A     GI+   + PLVSVDF
Sbjct:  100 TGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAEHRIVSNASCTTNCIIPVIKLLDDAYGIESGTVTTIHSAMHDQQVIDAYHPDLRRTRAASQSIIPVDTKLAAGITRFFPQFNDRFEAIAVRVPTINVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIVDYTELPLVSVDF 288          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: E4PD_ECO24 (D-erythrose-4-phosphate dehydrogenase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=epd PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.158e-27
Identity = 72/189 (38.10%), Postives = 91/189 (48.15%), Query Frame = 2
Query:    8 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            TGV+  RE    HI AGAKKVL + PG  D+  T V GVN D  + +  I+SNASCTTNC+ P +K+LD  +GI  GT+TT HS   DQ                  +I+P  T                   IA+RVPT N           K   A EVN   +++A     GI+   + PLVSVDF
Sbjct:  100 TGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAEHRIVSNASCTTNCIIPVIKLLDDAYGIESGTVTTIHSAMHDQQVIDAYHPDLRRTRAASQSIIPVDTKLAAGITRFFPQFNDRFEAIAVRVPTINVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIVDYTELPLVSVDF 288          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_PHYIN (Glyceraldehyde-3-phosphate dehydrogenase OS=Phytophthora infestans GN=GPDA PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.125e-27
Identity = 68/191 (35.60%), Postives = 99/191 (51.83%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            E TG F   E A  H++ G +KV+I+AP   D P +V+GVN + Y+ +  ++SNASCTTNCLAP  KV++ KFGI +G MTT H+ T  Q                   NI+P+ST                  G++ RVPT +                +E+ AA + +++NE+KGIL   ++ +VS DF
Sbjct:   94 ESTGAFTTLEKASTHLKNGVEKVVISAPSS-DAPMFVMGVNHELYEKNMHVVSNASCTTNCLAPLAKVVNDKFGIKEGLMTTVHAVTATQKTVDGPSKKDWRGGRGACFNIIPSSTGAAKAVGKVIPSLNGKLTGMSFRVPTADVSVVDLTARLVNPASYDEIKAAIKSASENEMKGILGYTEKAVVSSDF 283          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: E4PD_SHIDS (D-erythrose-4-phosphate dehydrogenase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=epd PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.125e-27
Identity = 72/189 (38.10%), Postives = 91/189 (48.15%), Query Frame = 2
Query:    8 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            TGV+  RE    HI AGAKKVL + PG  D+  T V GVN D  + +  I+SNASCTTNC+ P +K+LD  +GI  GT+TT HS   DQ                  +I+P  T                   IA+RVPT N           K   A EVN   +++A     GI+   + PLVSVDF
Sbjct:  100 TGVYGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAEHRIVSNASCTTNCIIPVIKLLDDAYGIESGTVTTIHSAMHDQQVIDAYHPDLRRTRAASQSIIPIDTKLAAGITRFFPQFNDRFEAIAVRVPTINVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIVDYTELPLVSVDF 288          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: E4PD_SALAR (D-erythrose-4-phosphate dehydrogenase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=epd PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.125e-27
Identity = 70/189 (37.04%), Postives = 92/189 (48.68%), Query Frame = 2
Query:    8 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            TGV+ +RE    HI AGAKKVL + PG  D+  T V GVN +  + +  I+SNASCTTNC+ P +K+LD  +GI  GT+TT HS   DQ                  +I+P  T                   IA+RVPT N           K   A EVN   +++A     GI+   + PLVS+DF
Sbjct:  100 TGVYGNREHGEAHIAAGAKKVLFSHPGSNDLDATVVFGVNQNQLRAEHRIVSNASCTTNCIIPVIKLLDDAYGIESGTVTTIHSAMNDQQVIDAYHPDLRRTRAASQSIIPVDTKLAAGITRIFPQFNDRFEAIAVRVPTINVTAIDLSVTVKKPIKASEVNQLLQKAAQGAFHGIVDYTESPLVSIDF 288          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: E4PD_SHEPW (D-erythrose-4-phosphate dehydrogenase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=epd PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.387e-27
Identity = 68/198 (34.34%), Postives = 94/198 (47.47%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSS 592
            E TGV  DR+    HI+AGA++VLI+ P   D+  T V GVN D  K +  I+SNASCTTNC+ P + VLD+ F +  G +TT HS   DQ                  +I+P  T                   I++RVPT N           K+   E+VN   +++ +    G++   +EPLVS DF     SS
Sbjct:   97 EATGVINDRQACEAHIEAGARQVLISHPSSSDVDATIVYGVNQDLLKAEHTIVSNASCTTNCIVPVIDVLDRHFQVKSGAITTIHSAMNDQQVIDAYHDDLRRTRAAGQSIIPVDTKLARGIERILPHMKDKFEAISVRVPTINVTAIDLSVTLDKRVDIEQVNRVLKQATEGSFSGVVGYTNEPLVSCDFNHDPRSS 294          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: E4PD_SHEPC (D-erythrose-4-phosphate dehydrogenase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=epd PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.387e-27
Identity = 71/198 (35.86%), Postives = 91/198 (45.96%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSS 592
            E TGV +DR+    HI AGAK+VLI+ P   D+  T V GVN D  +    ++SNASCTTNC+ P + VLD+ FG+  G +TT HS   DQ                  +I+P  T                   I++RVPT N          +K      VN     +A+    GIL   DEPLVS DF     SS
Sbjct:   97 EATGVILDRQSCEAHIHAGAKQVLISHPSSADVDGTIVYGVNHDLLRAGHTVVSNASCTTNCIVPVIDVLDKHFGVKSGAITTIHSAMNDQQVIDAYHDDLRRTRAAGQSIIPVDTKLARGIERILPHMKDKFEAISVRVPTINVTAIDLSVTLAKTVDIASVNQVLELAANGRFNGILGYTDEPLVSCDFNHDPRSS 294          
The following BLAST results are available for this feature:
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348
Match NameE-valueIdentityDescription
E4PD_ECO7I3.158e-2738.10D-erythrose-4-phosphate dehydrogenase OS=Escherich... [more]
E4PD_ECO5E3.158e-2738.10D-erythrose-4-phosphate dehydrogenase OS=Escherich... [more]
E4PD_ECO573.158e-2738.10D-erythrose-4-phosphate dehydrogenase OS=Escherich... [more]
E4PD_ECO553.158e-2738.10D-erythrose-4-phosphate dehydrogenase OS=Escherich... [more]
E4PD_ECO243.158e-2738.10D-erythrose-4-phosphate dehydrogenase OS=Escherich... [more]
G3P_PHYIN4.125e-2735.60Glyceraldehyde-3-phosphate dehydrogenase OS=Phytop... [more]
E4PD_SHIDS4.125e-2738.10D-erythrose-4-phosphate dehydrogenase OS=Shigella ... [more]
E4PD_SALAR4.125e-2737.04D-erythrose-4-phosphate dehydrogenase OS=Salmonell... [more]
E4PD_SHEPW5.387e-2734.34D-erythrose-4-phosphate dehydrogenase OS=Shewanell... [more]
E4PD_SHEPC5.387e-2735.86D-erythrose-4-phosphate dehydrogenase OS=Shewanell... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00681 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00681 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623590 ID=BQ623590; Name=BQ623590; organism=Citrus sinensis; type=EST; length=637bp
TGAAGGGACAGGAGTGTTTGTAGACAGAGAGGGTGCGGGCAAGCACATTC
AGGCTGGTGCCAAGAAAGTACTTATTACAGCCCCCGGCAAGGGTGACATC
CCAACCTACGTTGTTGGTGTCAATGCGGATGCTTACAAACCAGATGAGCC
CATCATCAGCAATGCTTCTTGCACAACCAACTGCCTTGCCCCATTCGTCA
AGGTTCTTGACCAGAAGTTTGGCATTATCAAGGGAACCATGACCACCACA
CACTCGTACACTGGCGACCAAAGACTACTCGATGCTAGCCACCGTGACCT
CAGGCGTGCAAGAGCAGCTGCACTCAACATTGTCCCAACATCAACTGGTG
CGGCAAAAGCTGTGGCCCTTGTCCTCCCAGCACTCAAAGGCAAACTAAAC
GGCATTGCCCTTCGTGTGCCAACACCAAACGTCTCGGTTGTTGATCTTGT
CGTTCAGGTGTCCAAGAAAACCTTCGCAGAAGAGGTGAACGCCGCCTTCA
GAGAAAGCGCTGACAATGAGCTGAAAGGCATCCTCTCCGTGTGCGACGAG
CCCCTTGTTTCGGTCGACTTCAGGTGCTCTGATGTATCCTCACCGTTGAT
TCATCTCTCACACTTGTCATGGGAGACGACATGGTTA
back to top