BQ623590

Overview
NameBQ623590
Unique NameBQ623590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length637
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_STRP8 (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptococcus pyogenes serotype M18 GN=gap PE=3 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 7.035e-27
Identity = 74/192 (38.54%), Postives = 91/192 (47.40%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQA-GAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ--XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVD 568
            E TG F  +E A KH+ A GAKKV+ITAPG  D+ T V   N D     E +IS ASCTTNCLAP  K L   FGI KG MTT H+YTGDQ                    NIVP ST                 +G A RVP P            K    +E+NAA + ++++         ++P+VS D
Sbjct:   95 EATGFFAKKEAAEKHLHANGAKKVVITAPGGNDVKTVVFNTNHDILDGTETVISGASCTTNCLAPMAKALHDAFGIQKGLMTTIHAYTGDQMILDGPHRGGDLRRARAGAANIVPNSTGAAKAIGLVIPELNGKLDGAAQRVPVPTGSVTELVVTLDKNVSVDEINAAMKAASNDS----FGYTEDPIVSSD 282          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_STRP6 (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptococcus pyogenes serotype M6 GN=gap PE=1 SV=3)

HSP 1 Score: 120.553 bits (301), Expect = 7.035e-27
Identity = 74/192 (38.54%), Postives = 91/192 (47.40%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQA-GAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ--XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVD 568
            E TG F  +E A KH+ A GAKKV+ITAPG  D+ T V   N D     E +IS ASCTTNCLAP  K L   FGI KG MTT H+YTGDQ                    NIVP ST                 +G A RVP P            K    +E+NAA + ++++         ++P+VS D
Sbjct:   95 EATGFFAKKEAAEKHLHANGAKKVVITAPGGNDVKTVVFNTNHDILDGTETVISGASCTTNCLAPMAKALHDAFGIQKGLMTTIHAYTGDQMILDGPHRGGDLRRARAGAANIVPNSTGAAKAIGLVIPELNGKLDGAAQRVPVPTGSVTELVVTLDKNVSVDEINAAMKAASNDS----FGYTEDPIVSSD 282          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_STRP1 (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptococcus pyogenes serotype M1 GN=gap PE=3 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 7.035e-27
Identity = 74/192 (38.54%), Postives = 91/192 (47.40%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQA-GAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ--XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVD 568
            E TG F  +E A KH+ A GAKKV+ITAPG  D+ T V   N D     E +IS ASCTTNCLAP  K L   FGI KG MTT H+YTGDQ                    NIVP ST                 +G A RVP P            K    +E+NAA + ++++         ++P+VS D
Sbjct:   95 EATGFFAKKEAAEKHLHANGAKKVVITAPGGNDVKTVVFNTNHDILDGTETVISGASCTTNCLAPMAKALHDAFGIQKGLMTTIHAYTGDQMILDGPHRGGDLRRARAGAANIVPNSTGAAKAIGLVIPELNGKLDGAAQRVPVPTGSVTELVVTLDKNVSVDEINAAMKAASNDS----FGYTEDPIVSSD 282          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: E4PD_ALTMD (D-erythrose-4-phosphate dehydrogenase OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=epd PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 9.189e-27
Identity = 68/191 (35.60%), Postives = 90/191 (47.12%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            E TG F DR     H+ AGA KVL ++PG  D+  T + G N D    ++ ++SN SCTTNC+ P ++ LD  FG+  GT+TT H+   DQ                  +I+P  T                   IA+RVPT N            K   E+VN A R +    L+GIL   +EPLVSVDF
Sbjct:   97 ECTGKFDDRASGQAHLDAGAGKVLFSSPGSPDLDNTVIFGTNEDTLTSEQKLVSNGSCTTNCIVPVIQALDAAFGVESGTITTIHASMHDQQVIDAYHEDLRRTRAASQSIIPVDTRLAAGIERILPKFAGKFEAIAVRVPTINVTAMDLSVTLQSKVTIEQVNQALRSAKAGRLQGILDYTEEPLVSVDF 287          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_BUCBP (Glyceraldehyde-3-phosphate dehydrogenase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=gapA PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.200e-26
Identity = 68/198 (34.34%), Postives = 105/198 (53.03%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSS 592
            E TG+F+  E + KHIQAGAKKV+IT+P K + P +V GVN + Y   + I+SNASCTTNCLAP  KV++ +F I++G MTT H+ T  Q                   NI+P++T                  GIA R+PT N           K    E++    + ++++++K ++   ++ +VS DF  + ++S
Sbjct:   95 ESTGIFLTTEDSYKHIQAGAKKVIITSPPKDNTPMFVRGVNFNEYV-GQKIVSNASCTTNCLAPLAKVINDEFEIVEGLMTTVHATTATQKTVDGVSYKDWRGGRSALQNIIPSTTGAARAVGKVLPELNGKLTGIAFRIPTANVSVVDLTVRNKKIATYEDICQIIKYASNHDMKEVIGYTEDHVVSSDFNGNTLTS 291          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3PC_SCEVA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (Fragment) OS=Scenedesmus vacuolatus GN=GapC PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.200e-26
Identity = 72/199 (36.18%), Postives = 100/199 (50.25%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDE-PIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSS 592
            E TGVF   +    H++ GAKKV+I+AP   D P +V+GVNAD Y P +  ++SNASCTTNCLAP  KV++  FGI +  MTT H+ T  Q                   NI+P+ST                  G+A RVPT +           K    E++ AA + +++  +KGIL   ++ +VS DF     SS
Sbjct:   89 ESTGVFTTVDKCQAHLKGGAKKVVISAPS-ADAPMFVMGVNADKYDPKQHTVVSNASCTTNCLAPLAKVVNDTFGIKEALMTTVHATTATQKTVDGPSKKDWRGGRGASANIIPSSTGAAKAVGKVIPELNGKLTGMAFRVPTQDVSVVDLTCILEKPAKYEDIMAALKAASEGPMKGILGYTEDDVVSSDFVSDPASS 286          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: E4PD_SHEON (D-erythrose-4-phosphate dehydrogenase OS=Shewanella oneidensis GN=epd PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.200e-26
Identity = 70/198 (35.35%), Postives = 90/198 (45.45%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSS 592
            E TG  +DR+    HI AGAK+VLI+ P   D+  T V GVN D  + +  ++SNASCTTNC+ P + VLD+ FG+  G +TT HS   DQ                  +I+P  T                   I++RVPT N           K      VN     +A+    GIL   DEPLVS DF     SS
Sbjct:   97 EATGAILDRQSCEAHIHAGAKQVLISHPSSADVDGTIVYGVNHDLLRAEHTVVSNASCTTNCIVPVIDVLDKHFGVKSGAITTIHSAMNDQQVIDAYHDDLRRTRAAGQSIIPVDTKLARGIERILPHMKDKFEAISVRVPTINVTAIDLSVTLDKTVDIATVNQVLELAANGRFNGILGYTDEPLVSCDFNHDPRSS 294          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: E4PD_KLEP3 (D-erythrose-4-phosphate dehydrogenase OS=Klebsiella pneumoniae (strain 342) GN=epd PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.200e-26
Identity = 71/189 (37.57%), Postives = 91/189 (48.15%), Query Frame = 2
Query:    8 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            TGV+  RE    H+QAGAKKVL + PG  D+  T V GVN D  + +  I+SNASCTTNC+ P +K+LD  +GI  GT+TT HS   DQ                  +I+P  T                   IA+RVPT N           K   A EVN   +++A     GI+   + PLVS DF
Sbjct:  100 TGVYGSREHGEAHLQAGAKKVLFSHPGGNDLDATVVYGVNQDELRAEHRIVSNASCTTNCIIPIIKLLDDAYGIESGTVTTIHSAMHDQQVIDAYHPDLRRTRAASQSIIPVDTKLAAGITRIFPQFNDRFEAIAVRVPTINVTAIDLSVTVKKPVKACEVNQLLQKAAQGAFHGIVDYTELPLVSTDF 288          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_STRPY (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptococcus pyogenes GN=gap PE=1 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 1.567e-26
Identity = 73/192 (38.02%), Postives = 91/192 (47.40%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQA-GAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ--XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVD 568
            E TG F  +E A KH+ A GAKKV+ITAPG  D+ T V   N D     E +IS ASCTTNCLAP  K L   FGI KG MTT H+YTGDQ                    NIVP ST                 +G A RVP P            K    +E+N+A + ++++         ++P+VS D
Sbjct:   95 EATGFFAKKEAAEKHLHANGAKKVVITAPGGNDVKTVVFNTNHDILDGTETVISGASCTTNCLAPMAKALHDAFGIQKGLMTTIHAYTGDQMILDGPHRGGDLRRARAGAANIVPNSTGAAKAIGLVIPELNGKLDGAAQRVPVPTGSVTELVVTLDKNVSVDEINSAMKAASNDS----FGYTEDPIVSSD 282          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: E4PD_SHESR (D-erythrose-4-phosphate dehydrogenase OS=Shewanella sp. (strain MR-7) GN=epd PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.567e-26
Identity = 70/198 (35.35%), Postives = 89/198 (44.95%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSS 592
            E TG  +DR     HI AGAK+VLI+ P   D+  T V GVN D  + +  ++SNASCTTNC+ P + VLD+ FG+  G +TT HS   DQ                  +I+P  T                   I++RVPT N           K      VN     +A+    GIL   DEPLVS DF     SS
Sbjct:   97 EATGAILDRNSCEAHIHAGAKQVLISHPSSADVDGTIVYGVNQDLLRAEHTVVSNASCTTNCIVPVIDVLDKHFGVKSGAITTIHSAMNDQQVIDAYHDDLRRTRAAGQSIIPVDTKLARGIERILPHMKDKFEAISVRVPTINVTAIDLSVTLDKTVDIATVNQVLELAANGRFNGILGYTDEPLVSCDFNHDPRSS 294          
The following BLAST results are available for this feature:
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348
Match NameE-valueIdentityDescription
G3P_STRP87.035e-2738.54Glyceraldehyde-3-phosphate dehydrogenase OS=Strept... [more]
G3P_STRP67.035e-2738.54Glyceraldehyde-3-phosphate dehydrogenase OS=Strept... [more]
G3P_STRP17.035e-2738.54Glyceraldehyde-3-phosphate dehydrogenase OS=Strept... [more]
E4PD_ALTMD9.189e-2735.60D-erythrose-4-phosphate dehydrogenase OS=Alteromon... [more]
G3P_BUCBP1.200e-2634.34Glyceraldehyde-3-phosphate dehydrogenase OS=Buchne... [more]
G3PC_SCEVA1.200e-2636.18Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
E4PD_SHEON1.200e-2635.35D-erythrose-4-phosphate dehydrogenase OS=Shewanell... [more]
E4PD_KLEP31.200e-2637.57D-erythrose-4-phosphate dehydrogenase OS=Klebsiell... [more]
G3P_STRPY1.567e-2638.02Glyceraldehyde-3-phosphate dehydrogenase OS=Strept... [more]
E4PD_SHESR1.567e-2635.35D-erythrose-4-phosphate dehydrogenase OS=Shewanell... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00681 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00681 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623590 ID=BQ623590; Name=BQ623590; organism=Citrus sinensis; type=EST; length=637bp
TGAAGGGACAGGAGTGTTTGTAGACAGAGAGGGTGCGGGCAAGCACATTC
AGGCTGGTGCCAAGAAAGTACTTATTACAGCCCCCGGCAAGGGTGACATC
CCAACCTACGTTGTTGGTGTCAATGCGGATGCTTACAAACCAGATGAGCC
CATCATCAGCAATGCTTCTTGCACAACCAACTGCCTTGCCCCATTCGTCA
AGGTTCTTGACCAGAAGTTTGGCATTATCAAGGGAACCATGACCACCACA
CACTCGTACACTGGCGACCAAAGACTACTCGATGCTAGCCACCGTGACCT
CAGGCGTGCAAGAGCAGCTGCACTCAACATTGTCCCAACATCAACTGGTG
CGGCAAAAGCTGTGGCCCTTGTCCTCCCAGCACTCAAAGGCAAACTAAAC
GGCATTGCCCTTCGTGTGCCAACACCAAACGTCTCGGTTGTTGATCTTGT
CGTTCAGGTGTCCAAGAAAACCTTCGCAGAAGAGGTGAACGCCGCCTTCA
GAGAAAGCGCTGACAATGAGCTGAAAGGCATCCTCTCCGTGTGCGACGAG
CCCCTTGTTTCGGTCGACTTCAGGTGCTCTGATGTATCCTCACCGTTGAT
TCATCTCTCACACTTGTCATGGGAGACGACATGGTTA
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