BQ623590

Overview
NameBQ623590
Unique NameBQ623590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length637
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10901 contig Csv1_Contig10901:708..1345. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: E4PD_SHESM (D-erythrose-4-phosphate dehydrogenase OS=Shewanella sp. (strain MR-4) GN=epd PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.567e-26
Identity = 70/198 (35.35%), Postives = 89/198 (44.95%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSS 592
            E TG  +DR     HI AGAK+VLI+ P   D+  T V GVN D  + +  ++SNASCTTNC+ P + VLD+ FG+  G +TT HS   DQ                  +I+P  T                   I++RVPT N           K      VN     +A+    GIL   DEPLVS DF     SS
Sbjct:   97 EATGAILDRNSCEAHIHAGAKQVLISHPSSADVDGTIVYGVNQDLLRAEHTVVSNASCTTNCIVPVIDVLDKHFGVKSGAITTIHSAMNDQQVIDAYHDDLRRTRAAGQSIIPVDTKLARGIERILPHMKDKFEAISVRVPTINVTAIDLSVTLDKTVDIATVNQVLELAANGRFNGILGYTDEPLVSCDFNHDPRSS 294          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: E4PD_SHEPA (D-erythrose-4-phosphate dehydrogenase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=epd PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.567e-26
Identity = 69/198 (34.85%), Postives = 93/198 (46.97%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSS 592
            E TGV  DR     HIQAGAK+VLI+ P   D+  T V GVN D  K +  ++SNASCTTNC+ P + VLD+ F +  G +TT HS   DQ                  +I+P  T                   I++RVPT N          +K+   E VN   +++ +    G++   +EPLVS DF     SS
Sbjct:   97 EATGVINDRLECEAHIQAGAKQVLISHPSSSDVDATIVFGVNQDLLKAEHTVVSNASCTTNCIVPVIDVLDRHFEVKSGAITTIHSAMNDQQVIDAYHDDLRRTRAAGQSIIPVDTKLARGIERILPHMKDKFEAISVRVPTINVTAIDLSVTLNKRVDIETVNQVLKQATEGSFSGVVGFTNEPLVSCDFNHDPRSS 294          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_STRP3 (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptococcus pyogenes serotype M3 GN=gap PE=3 SV=3)

HSP 1 Score: 119.013 bits (297), Expect = 2.047e-26
Identity = 73/192 (38.02%), Postives = 90/192 (46.88%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQA-GAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ--XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVD 568
            E TG F  +E A KH+   GAKKV+ITAPG  D+ T V   N D     E +IS ASCTTNCLAP  K L   FGI KG MTT H+YTGDQ                    NIVP ST                 +G A RVP P            K    +E+NAA + ++++         ++P+VS D
Sbjct:   95 EATGFFAKKEAAEKHLHTNGAKKVVITAPGGNDVKTVVFNTNHDILDGTETVISGASCTTNCLAPMAKALHDAFGIQKGLMTTIHAYTGDQMILDGPHRGGDLRRARAGAANIVPNSTGAAKAIGLVIPELNGKLDGAAQRVPVPTGSVTELVVTLDKNVSVDEINAAMKAASNDS----FGYTEDPIVSSD 282          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_BORHE (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Borrelia hermsii GN=gap PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.047e-26
Identity = 74/199 (37.19%), Postives = 99/199 (49.75%), Query Frame = 2
Query:    2 EGTGVFV----DREGAGKHIQAGA--KKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFA-EEVNAAFRESADN-ELKGILSVCDEPLVSVDFR 574
            E TGVF     D+ G   H++AGA  KKV++TAP K +I T  +GV       D   +SNASCTTNCLAP  KVL + FGI +G MTT H+YT  Q                  +I+PTST                 NG ++RVP P            KK    EE+N+  +++++  EL GIL   ++P VS D +
Sbjct:   62 ESTGVFSSATSDKGGYLDHVEAGAGAKKVILTAPAKDEIKTIXLGVXDHDINXDLKAVSNASCTTNCLAPLAKVLHESFGIEQGLMTTVHAYTNXQRILDLPHSDLRRARAAALSIIPTSTGAAKAVGLVLPELKGKLNGTSMRVPVPTGSIVDLTVQLKKKDVTKEEINSVLKKASETPELNGILGYTEDPXVSSDXK 260          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: E4PD_SALG2 (D-erythrose-4-phosphate dehydrogenase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=epd PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.047e-26
Identity = 69/189 (36.51%), Postives = 91/189 (48.15%), Query Frame = 2
Query:    8 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            TGV+ +RE    HI AGAKKVL + PG   +  T V GVN +  + +  I+SNASCTTNC+ P +K+LD  +GI  GT+TT HS   DQ                  +I+P  T                   IA+RVPT N           K   A EVN   +++A     GI+   + PLVS+DF
Sbjct:  100 TGVYGNREHGEAHIAAGAKKVLFSHPGSNGLDATVVFGVNQNELRAEHRIVSNASCTTNCIIPVIKLLDDAYGIESGTVTTIHSAMNDQQVIDAYHSDLRRTRAASQSIIPVDTKLAAGITRIFPQFNDRFEAIAVRVPTINVTAIDLSVTVKKPVKASEVNQLLQKAAQGAFHGIVDYTESPLVSIDF 288          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: E4PD_SHESA (D-erythrose-4-phosphate dehydrogenase OS=Shewanella sp. (strain ANA-3) GN=epd PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.673e-26
Identity = 70/198 (35.35%), Postives = 89/198 (44.95%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSS 592
            E TG  +DR     HI AGAK+VLI+ P   D+  T V GVN D  + +  ++SNASCTTNC+ P + VLD+ FG+  G +TT HS   DQ                  +I+P  T                   I++RVPT N           K      VN     +A+    GIL   DEPLVS DF     SS
Sbjct:   97 EATGAILDRNSCEAHILAGAKQVLISHPSSADVDGTIVYGVNQDLLRAEHTVVSNASCTTNCIVPVIDVLDKHFGVKSGAITTIHSAMNDQQVIDAYHDDLRRTRAAGQSIIPVDTKLARGIERILPHMKDKFEAISVRVPTINVTAIDLSVTLDKTVDIATVNQVLELAANGRFNGILGYTDEPLVSCDFNHDPRSS 294          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: E4PD_SHELP (D-erythrose-4-phosphate dehydrogenase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=epd PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.673e-26
Identity = 67/198 (33.84%), Postives = 94/198 (47.47%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSS 592
            E TG  +DR+    HI+AGAK+VLI+ P  GD+  T V GVN    K +  ++SNASCTTNCL P ++VLD+ F +  G +TT HS   DQ                  +I+P  T                   I++RVPT N           K+   + VN    ++A+   +G++   + PLVS DF     SS
Sbjct:   97 EATGALIDRQACEAHIRAGAKQVLISHPSSGDVDATIVYGVNHQDLKAEHKVVSNASCTTNCLVPIIQVLDRAFKVRSGAITTIHSAMNDQQVIDAYHDDLRRTRAAGQSIIPVDTKLARGIERILPEMKDKFEAISVRVPTINVTAIDLSVTLDKRVDIDTVNQVLSQAANGSYQGVVGYTNAPLVSCDFNHDPRSS 294          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: E4PD_KLEP7 (D-erythrose-4-phosphate dehydrogenase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=epd PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.673e-26
Identity = 71/189 (37.57%), Postives = 90/189 (47.62%), Query Frame = 2
Query:    8 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            TGV+  RE    H+QAGAKKVL + PG  D+  T V GVN D  +    I+SNASCTTNC+ P +K+LD  +GI  GT+TT HS   DQ                  +I+P  T                   IA+RVPT N           K   A EVN   +++A     GI+   + PLVS DF
Sbjct:  100 TGVYGSREHGEAHLQAGAKKVLFSHPGGNDLDATVVYGVNQDELRAGHRIVSNASCTTNCIIPIIKLLDDAYGIESGTVTTIHSAMHDQQVIDAYHPDLRRTRAASQSIIPVDTKLAAGITRIFPQFNDRFEAIAVRVPTINVTAIDLSVTVKKPVKACEVNQLLQKAAQGAFHGIVDYTELPLVSTDF 288          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: E4PD_IDILO (D-erythrose-4-phosphate dehydrogenase OS=Idiomarina loihiensis GN=epd PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.673e-26
Identity = 68/196 (34.69%), Postives = 91/196 (46.43%), Query Frame = 2
Query:    8 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSS 592
            TGVF  +     ++Q G K+VL + PGK D+  T + GVN      D  ++SN SCTTNC+ P +KVLD  FGI  G +TT HS   DQ                  +I+P  T                   IA+RVPT N          +     E++N   RE ++ +L GIL   +EPLVS+DF     SS
Sbjct:  102 TGVFGSQADGQLYLQQGVKRVLFSHPGKPDVDFTAIYGVNEKELTVDHKVVSNGSCTTNCIVPVIKVLDDAFGIDSGAITTIHSAMHDQQVIDAYHPDLRRTRAAGRSIIPVDTRLARGIERILPHLEGRFEAIAVRVPTTNVTAMDLSVTLNSDATIEQINQVLREQSERQLAGILDYTEEPLVSIDFNHDPHSS 297          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: E4PD_SALPK (D-erythrose-4-phosphate dehydrogenase OS=Salmonella paratyphi A (strain AKU_12601) GN=epd PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.492e-26
Identity = 68/189 (35.98%), Postives = 91/189 (48.15%), Query Frame = 2
Query:    8 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            TGV+ ++E    HI AGAKKVL + PG  D+  T V GVN +  + +  I+SNASCTTNC+ P +K+LD  +GI  GT+T  HS   DQ                  +I+P  T                   IA+RVPT N           K   A EVN   +++A     GI+   + PLVS+DF
Sbjct:  100 TGVYGNQEHGEAHIAAGAKKVLFSHPGSNDLDATVVFGVNQNQLRAEHRIVSNASCTTNCIIPVIKLLDDAYGIESGTVTAIHSAMNDQQVIDAYHSDLRRTRAASQSIIPVDTKLAAGITRIFPQFNDRFEAIAVRVPTINVTAIDLSVTVKKPVKASEVNQLLQKAAQGAFHGIVDYTESPLVSIDF 288          
The following BLAST results are available for this feature:
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348
Match NameE-valueIdentityDescription
E4PD_SHESM1.567e-2635.35D-erythrose-4-phosphate dehydrogenase OS=Shewanell... [more]
E4PD_SHEPA1.567e-2634.85D-erythrose-4-phosphate dehydrogenase OS=Shewanell... [more]
G3P_STRP32.047e-2638.02Glyceraldehyde-3-phosphate dehydrogenase OS=Strept... [more]
G3P_BORHE2.047e-2637.19Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
E4PD_SALG22.047e-2636.51D-erythrose-4-phosphate dehydrogenase OS=Salmonell... [more]
E4PD_SHESA2.673e-2635.35D-erythrose-4-phosphate dehydrogenase OS=Shewanell... [more]
E4PD_SHELP2.673e-2633.84D-erythrose-4-phosphate dehydrogenase OS=Shewanell... [more]
E4PD_KLEP72.673e-2637.57D-erythrose-4-phosphate dehydrogenase OS=Klebsiell... [more]
E4PD_IDILO2.673e-2634.69D-erythrose-4-phosphate dehydrogenase OS=Idiomarin... [more]
E4PD_SALPK3.492e-2635.98D-erythrose-4-phosphate dehydrogenase OS=Salmonell... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00681 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00681 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623590 ID=BQ623590; Name=BQ623590; organism=Citrus sinensis; type=EST; length=637bp
TGAAGGGACAGGAGTGTTTGTAGACAGAGAGGGTGCGGGCAAGCACATTC
AGGCTGGTGCCAAGAAAGTACTTATTACAGCCCCCGGCAAGGGTGACATC
CCAACCTACGTTGTTGGTGTCAATGCGGATGCTTACAAACCAGATGAGCC
CATCATCAGCAATGCTTCTTGCACAACCAACTGCCTTGCCCCATTCGTCA
AGGTTCTTGACCAGAAGTTTGGCATTATCAAGGGAACCATGACCACCACA
CACTCGTACACTGGCGACCAAAGACTACTCGATGCTAGCCACCGTGACCT
CAGGCGTGCAAGAGCAGCTGCACTCAACATTGTCCCAACATCAACTGGTG
CGGCAAAAGCTGTGGCCCTTGTCCTCCCAGCACTCAAAGGCAAACTAAAC
GGCATTGCCCTTCGTGTGCCAACACCAAACGTCTCGGTTGTTGATCTTGT
CGTTCAGGTGTCCAAGAAAACCTTCGCAGAAGAGGTGAACGCCGCCTTCA
GAGAAAGCGCTGACAATGAGCTGAAAGGCATCCTCTCCGTGTGCGACGAG
CCCCTTGTTTCGGTCGACTTCAGGTGCTCTGATGTATCCTCACCGTTGAT
TCATCTCTCACACTTGTCATGGGAGACGACATGGTTA
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