BQ623590

Overview
NameBQ623590
Unique NameBQ623590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length637
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: E4PD_PSEA6 (D-erythrose-4-phosphate dehydrogenase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=epd PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.502e-24
Identity = 66/191 (34.55%), Postives = 91/191 (47.64%), Query Frame = 2 
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            E TGV  +R    +HI  GAKKVL + P   D+  T ++G+N ++ K  + I+S  SCTTNC+ P ++VLD+ F +  GT+TT HS   DQ                  +I+P  T                   IA+RVPT N            K   ++VN A +   +  L GIL   +EPLVSVDF
Sbjct:   97 ECTGVNNERVHGEQHIAQGAKKVLFSQPCGPDVDATIIMGINEESLKASDSIVSAGSCTTNCIVPVIQVLDEAFSVSSGTITTIHSSMHDQQVIDAYHPDLRRTRAASQSIIPVDTKLARGIERVLPKFAGKFEAIAVRVPTINVSAMDLSVTLDAKVTIDDVNQALKTVKNGRLNGILDFTEEPLVSVDF 287
[Close]
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: E4PD_PHOPR (D-erythrose-4-phosphate dehydrogenase OS=Photobacterium profundum GN=epd PE=3 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 2.502e-24
Identity = 66/189 (34.92%), Postives = 87/189 (46.03%), Query Frame = 2 
Query:    8 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            TGV+  RE    HI+AGAKKVL + P   DI  T + GVN      +  I+SN SCTTNC+ P +K++D  FGI  GT+TT HS   DQ                  +I+P  T                   I++RVPT N                 +VN A  E +   L+GI+   + PLVS+DF
Sbjct:  105 TGVYGSREDGLAHIKAGAKKVLFSHPAANDIDNTIIYGVNHKTLTSEHRIVSNGSCTTNCIVPVIKIIDDAFGIESGTITTIHSAMNDQQVIDGYHSDLRRTRAASQSIIPVDTKLHLGIGRIFPKFVDKFEAISVRVPTINVTAMDLSVTVKTNVKVNDVNQALSEVSRCTLEGIVDYTEAPLVSIDF 293
[Close]
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: E4PD_AERHH (D-erythrose-4-phosphate dehydrogenase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=epd PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.502e-24
Identity = 70/189 (37.04%), Postives = 89/189 (47.09%), Query Frame = 2 
Query:    8 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            TGVF  R  A  H+ AGA KVL + P + D+  T V GVN       E I+SNASCTTNC+ P ++ L ++F I  GT+TT HS   DQ                  +I+P  T                   IA+RVPT N           KK    +VN A + ++   L GIL   +EPLVSVDF
Sbjct:   99 TGVFGSRADAELHLAAGAGKVLFSHPAEADVDATIVYGVNHQVLTGRERIVSNASCTTNCVVPVIETLHREFEINCGTITTIHSAMHDQQVIDAYHSDLRRTRAASQSIIPVDTKLAKGLERILPHFAGKFEAIAVRVPTINVTAMDLSITVRKKVTVTDVNQALQRASRGTLSGILDYTEEPLVSVDF 287
[Close]
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: E4PD_PSYIN (D-erythrose-4-phosphate dehydrogenase OS=Psychromonas ingrahamii (strain 37) GN=epd PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.268e-24
Identity = 66/189 (34.92%), Postives = 87/189 (46.03%), Query Frame = 2 
Query:    8 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            TG++  R  A  HI AGAKKV+ + P   D+  T V G+N      DE  IS ASCTTNC+ P +  LD+ F I  GT+TT HS   DQ                  +I+P  T                   IA+RVPT N          SK    +E+N    ++++  LK IL   + PLVS+DF
Sbjct:  100 TGIYGSRADADAHIAAGAKKVIFSHPADPDVDATVVYGINHQQLTGDETFISGASCTTNCMVPVIDTLDKHFAIKCGTITTIHSAMNDQPVIDAYHSDLRRTRAASQSIIPVDTKLAAGIERILPKFANKFEAIAVRVPTINVTAMDLSITVSKDVTIQEINDCLLKASETNLKDILGYTEAPLVSIDF 288
[Close]
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: E4PD_VIBCH (D-erythrose-4-phosphate dehydrogenase OS=Vibrio cholerae GN=epd PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.268e-24
Identity = 64/189 (33.86%), Postives = 87/189 (46.03%), Query Frame = 2 
Query:    8 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            TGV+  +E   +HI AGAK VL + PG  D+  T + GVN +    +  I+SN SCTTNC+ P +KVLD  FGI  GT+TT HS   DQ                  +I+P  T                   I++RVPT N                 +VN     ++   L+GI+   + PLVS+DF
Sbjct:  104 TGVYGCQEDGQQHIDAGAKLVLFSHPGASDLDNTIIYGVNHETLTAEHKIVSNGSCTTNCIVPIIKVLDDAFGIDSGTITTIHSSMNDQQVIDAYHNDLRRTRAASQSIIPVDTKLHKGIERIFPKFSNKFEAISVRVPTVNVTAMDLSVTIKSNVKVNDVNQTIVNASQCTLRGIVDYTEAPLVSIDF 292
[Close]
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: E4PD_VIBC3 (D-erythrose-4-phosphate dehydrogenase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=epd PE=1 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 4.268e-24
Identity = 64/189 (33.86%), Postives = 87/189 (46.03%), Query Frame = 2 
Query:    8 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            TGV+  +E   +HI AGAK VL + PG  D+  T + GVN +    +  I+SN SCTTNC+ P +KVLD  FGI  GT+TT HS   DQ                  +I+P  T                   I++RVPT N                 +VN     ++   L+GI+   + PLVS+DF
Sbjct:  104 TGVYGCQEDGQQHIDAGAKLVLFSHPGASDLDNTIIYGVNHETLTAEHKIVSNGSCTTNCIVPIIKVLDDAFGIDSGTITTIHSSMNDQQVIDAYHNDLRRTRAASQSIIPVDTKLHKGIERIFPKFSNKFEAISVRVPTVNVTAMDLSVTIKSNVKVNDVNQTIVNASQCTLRGIVDYTEAPLVSIDF 292
[Close]
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: E4PD_AERS4 (D-erythrose-4-phosphate dehydrogenase OS=Aeromonas salmonicida (strain A449) GN=epd PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 5.574e-24
Identity = 70/189 (37.04%), Postives = 88/189 (46.56%), Query Frame = 2 
Query:    8 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            TGVF  R  A  H+ AGA KVL + P   D+  T V GVN       E I+SNASCTTNC+ P ++ L ++F I  GT+TT HS   DQ                  +I+P  T                   IA+RVPT N           KK    +VN A + ++   L GIL   +EPLVSVDF
Sbjct:   99 TGVFGSRADAELHLGAGAGKVLFSHPADADVDATIVYGVNHQVLTGRERIVSNASCTTNCVVPVIETLHREFEINCGTITTIHSAMHDQQVIDAYHSDLRRTRAASQSIIPVDTKLAKGLERILPHFAGKFEAIAVRVPTINVTAMDLSITVRKKVTVTDVNQALQRASRGTLSGILDYTEEPLVSVDF 287
[Close]
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: E4PD_VIBFM (D-erythrose-4-phosphate dehydrogenase OS=Vibrio fischeri (strain MJ11) GN=epd PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 7.281e-24
Identity = 63/189 (33.33%), Postives = 86/189 (45.50%), Query Frame = 2 
Query:    8 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            TGV+  +    KHI AGAKKVL + PG  D+  T + GVN D   P+  I+SN SCTTNC+ P +K +D  FGI  GT+TT HS   DQ                  +I+P  T                   I++RVPT N          +      ++N     ++   L  I+   + PLVS+DF
Sbjct:  104 TGVYGSKADGEKHINAGAKKVLFSHPGGSDLDNTIIYGVNHDTLLPEHRIVSNGSCTTNCIIPVIKAIDDAFGIDSGTITTIHSSMNDQQVIDAYHSDLRRTRAASQSIIPVDTKLHKGIERIFPKFSNKFEAISVRVPTVNVTAMDLSVTINTNVKVNDINQTIVNASRCTLHNIVDYTEAPLVSIDF 292
[Close]
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: E4PD_VIBF1 (D-erythrose-4-phosphate dehydrogenase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=epd PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 7.281e-24
Identity = 63/189 (33.33%), Postives = 86/189 (45.50%), Query Frame = 2 
Query:    8 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            TGV+  +    KHI AGAKKVL + PG  D+  T + GVN D   P+  I+SN SCTTNC+ P +K +D  FGI  GT+TT HS   DQ                  +I+P  T                   I++RVPT N          +      ++N     ++   L  I+   + PLVS+DF
Sbjct:  104 TGVYGSKSDGEKHITAGAKKVLFSHPGGSDLDNTIIYGVNHDTLLPEHRIVSNGSCTTNCIIPVIKAIDDAFGIDSGTITTIHSSMNDQQVIDAYHSDLRRTRAASQSIIPVDTKLHKGIERIFPKFSNKFEAISVRVPTVNVTAMDLSVTINTNVKVNDINQTIVNASRCTLHNIVDYTEAPLVSIDF 292
[Close]
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: E4PD_ALISL (D-erythrose-4-phosphate dehydrogenase OS=Aliivibrio salmonicida (strain LFI1238) GN=epd PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 7.281e-24
Identity = 61/189 (32.28%), Postives = 86/189 (45.50%), Query Frame = 2 
Query:    8 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            TGV+  +    +HI AGAKKVL + PG  D+  T + GVN D   P+  ++SN SCTTNC+ P +K +D  FGI  GT+TT HS   DQ                  +I+P  T                   I++RVPT N          +      ++N     ++   L  I+   + PLVS+DF
Sbjct:  104 TGVYGSKADGERHIDAGAKKVLFSHPGSADLDNTIIYGVNHDTLLPEHRVVSNGSCTTNCIIPVIKAIDDAFGIESGTITTIHSAMNDQPVIDAYHTDLRRTRAASQSIIPVDTKLHKGIERIFPKFSNKFEAISVRVPTVNVTAMDLSVTINTNVKVNDINQTIVNASQCTLHNIVDYTEAPLVSIDF 292
The following BLAST results are available for this feature:
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348
Match NameE-valueIdentityDescription
E4PD_PSEA62.502e-2434.55D-erythrose-4-phosphate dehydrogenase OS=Pseudoalt... [more]
E4PD_PHOPR2.502e-2434.92D-erythrose-4-phosphate dehydrogenase OS=Photobact... [more]
E4PD_AERHH2.502e-2437.04D-erythrose-4-phosphate dehydrogenase OS=Aeromonas... [more]
E4PD_PSYIN3.268e-2434.92D-erythrose-4-phosphate dehydrogenase OS=Psychromo... [more]
E4PD_VIBCH4.268e-2433.86D-erythrose-4-phosphate dehydrogenase OS=Vibrio ch... [more]
E4PD_VIBC34.268e-2433.86D-erythrose-4-phosphate dehydrogenase OS=Vibrio ch... [more]
E4PD_AERS45.574e-2437.04D-erythrose-4-phosphate dehydrogenase OS=Aeromonas... [more]
E4PD_VIBFM7.281e-2433.33D-erythrose-4-phosphate dehydrogenase OS=Vibrio fi... [more]
E4PD_VIBF17.281e-2433.33D-erythrose-4-phosphate dehydrogenase OS=Vibrio fi... [more]
E4PD_ALISL7.281e-2432.28D-erythrose-4-phosphate dehydrogenase OS=Aliivibri... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00681 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00681 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623590 ID=BQ623590; Name=BQ623590; organism=Citrus sinensis; type=EST; length=637bp
TGAAGGGACAGGAGTGTTTGTAGACAGAGAGGGTGCGGGCAAGCACATTC
AGGCTGGTGCCAAGAAAGTACTTATTACAGCCCCCGGCAAGGGTGACATC
CCAACCTACGTTGTTGGTGTCAATGCGGATGCTTACAAACCAGATGAGCC
CATCATCAGCAATGCTTCTTGCACAACCAACTGCCTTGCCCCATTCGTCA
AGGTTCTTGACCAGAAGTTTGGCATTATCAAGGGAACCATGACCACCACA
CACTCGTACACTGGCGACCAAAGACTACTCGATGCTAGCCACCGTGACCT
CAGGCGTGCAAGAGCAGCTGCACTCAACATTGTCCCAACATCAACTGGTG
CGGCAAAAGCTGTGGCCCTTGTCCTCCCAGCACTCAAAGGCAAACTAAAC
GGCATTGCCCTTCGTGTGCCAACACCAAACGTCTCGGTTGTTGATCTTGT
CGTTCAGGTGTCCAAGAAAACCTTCGCAGAAGAGGTGAACGCCGCCTTCA
GAGAAAGCGCTGACAATGAGCTGAAAGGCATCCTCTCCGTGTGCGACGAG
CCCCTTGTTTCGGTCGACTTCAGGTGCTCTGATGTATCCTCACCGTTGAT
TCATCTCTCACACTTGTCATGGGAGACGACATGGTTA
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