BQ623590

Overview
NameBQ623590
Unique NameBQ623590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length637
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: E4PD_ERWT9 (D-erythrose-4-phosphate dehydrogenase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=epd PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 9.509e-24
Identity = 66/189 (34.92%), Postives = 88/189 (46.56%), Query Frame = 2
Query:    8 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            TGV+  R     H++AGA+KVL + PG  D+  T V GVN     P+  ++SNASCTTNC+ P +K+LD  +GI  GT+TT HS   DQ                  +I+P  T                   IA+RVPT N               A EVNA    ++     GI+   + PLVS+DF
Sbjct:  100 TGVYGSRADGEAHLKAGARKVLFSHPGGHDLDATVVYGVNEKELLPEHLLVSNASCTTNCIIPIIKLLDDAWGIESGTVTTIHSAMHDQQVIDAYHPDLRRTRAASQSIIPVDTRLAAGITRIFPKFNDRFEAIAVRVPTINVTAIDLSVSVRDAVKASEVNALLHSASLGAFSGIVDYTELPLVSIDF 288          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_PLESA (Glyceraldehyde-3-phosphate dehydrogenase OS=Pleurotus sajor-caju GN=GPD PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.622e-23
Identity = 69/198 (34.85%), Postives = 97/198 (48.99%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRCSDVSS 592
            E TGVF   + A  H++ G +KV+I+AP   D P +V GVN + Y P   +ISNAS TTNCL P  KV+  KFGI++G ++T H+ T  Q                   NI+P+ST                  G++ RVPT +           K    +E+ AA +E+++   KGIL    + +VS DF  S  SS
Sbjct:   95 ESTGVFTTIDKASAHLKGG-EKVVISAPS-ADAPMFVCGVNLETYDPKYKVISNASSTTNCLTPLAKVIHDKFGIVEGLISTIHATTATQKTVDGPSHKDWRGGRSVNNNIIPSSTGAANWVGKVIPSLNGKLTGLSFRVPTLDVSVVDLVVRLEKPADYKEIVAAIKEASETTHKGILGFTSDSVVSTDFVGSTDSS 290          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: E4PD_COLP3 (D-erythrose-4-phosphate dehydrogenase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=epd PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.613e-23
Identity = 63/190 (33.16%), Postives = 90/190 (47.37%), Query Frame = 2
Query:    8 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADN-ELKGILSVCDEPLVSVDF 571
            TG + ++     HI  GAKKVL + PG  DI  T + G+N       + ++SN SCTTNC+ P +KV+D+ FG+  G++TT HS   DQ                  +I+P  T                   IA+RVPT N          +      ++N A + +  N +L G+LS  +EPLVSVDF
Sbjct:  100 TGKYGNKADGLSHINRGAKKVLFSHPGSQDIDATIIYGINHQTLTSSDRVVSNGSCTTNCIVPVIKVIDEAFGVESGSITTIHSSMHDQQVIDAYHKDLRLSRAASQSIIPVDTKLAAGIERILPKFKGRFEAIAVRVPTINVTAMDLSLTVNNDVCICDINQAIQAATSNHDLYGVLSYTEEPLVSVDF 289          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P_STREQ (Glyceraldehyde-3-phosphate dehydrogenase OS=Streptococcus equisimilis GN=gap PE=3 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 4.719e-23
Identity = 69/192 (35.94%), Postives = 87/192 (45.31%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQA-GAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ--XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVD 568
            E TG F  +E A K + A GAKKV+ITAPG  D+      +        E +IS ASCTTNCLAP  K L   FGI KG MTT H+YTGDQ                    NIVP ST                 +G A RVP P            K    +E+NAA + ++++         ++P+VS D
Sbjct:   95 EATGFFAKKEAAEKPLHANGAKKVVITAPGGNDVKQLFSTLTTSILDGTETVISGASCTTNCLAPMAKALHDAFGIQKGLMTTIHAYTGDQMIVDGHRGGGDLRRARAGAANIVPNSTGARKAIGLVIPELNGKLDGAAQRVPVPTGSVTELVVTLDKNVSVDEINAAMKAASNDS----FGYTEDPIVSSD 282          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: E4PD_YERE8 (D-erythrose-4-phosphate dehydrogenase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=epd PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 8.050e-23
Identity = 64/189 (33.86%), Postives = 87/189 (46.03%), Query Frame = 2
Query:    8 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            +GV+  R     H+ +GAKKVL   PG  D+  T V GVN    + D  I+SNASCTTNC+ P +++LD  FGI  GT+TT HS   DQ                  +I+P  T                   I++RVPT N          +      EVN   +++A    +GI+   + PLVS DF
Sbjct:  100 SGVYGSRADGEAHLTSGAKKVLFAHPGGHDLDATVVYGVNHQDLQADHRIVSNASCTTNCIIPIIQLLDVAFGIESGTVTTIHSSMNDQPVIDAYHQDLRRTRAASQSIIPVDTKLAAGITRIFPKFCDRFEAISVRVPTINVTAIDLSVSVTSPVDVAEVNQLLQKAARGSFRGIVDYTELPLVSTDF 288          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: G3P3_ECOLI (Putative glyceraldehyde-3-phosphate dehydrogenase C OS=Escherichia coli (strain K12) GN=gapC PE=5 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.051e-22
Identity = 71/190 (37.37%), Postives = 87/190 (45.79%), Query Frame = 2
Query:    2 EGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVD 568
            E TG +   E +  H+ AGAKKVLI+AP  G++ T V  VN D    ++ I+S ASCTTNCLAP  K L   FGI  GTMTT H+YTG Q                   NI+P +T                  G A RVP              KK  AEEVN A +++  N         DE +VS D
Sbjct:   95 ECTGFYTSAEKSQAHLDAGAKKVLISAPA-GEMKTIVYNVNDDTLDGNDTIVSVASCTTNCLAPMAKALHDSFGIEVGTMTTIHAYTGTQSLVDGPRGKDLRASRAAAENIIPHTTGAAKAIGLVIPELSGKLKGHAQRVPVKTGSVTELVSILGKKVTAEEVNNALKQATTNNES--FGYTDEEIVSSD 281          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: E4PD_YERPS (D-erythrose-4-phosphate dehydrogenase OS=Yersinia pseudotuberculosis GN=epd PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.051e-22
Identity = 63/189 (33.33%), Postives = 89/189 (47.09%), Query Frame = 2
Query:    8 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            +GV+  RE    H+ +GAKKVL   PG  D+  T V GVN    + +  I+SNASCTTNC+ P +++LD  +GI  GT+TT HS   DQ                  +I+P  T                   I++RVPT N          +      EVN   +++A    +GI+   + PLVS+DF
Sbjct:  100 SGVYGSREDGEAHVASGAKKVLFAHPGGHDLDATVVYGVNHQDLRAEHRIVSNASCTTNCIIPIIQLLDIAYGIESGTVTTIHSSMNDQPVIDAYHQDLRRTRAASQSIIPVDTKLAAGITRIFPKFCDRFEAISVRVPTINVTAIDLSVSVTHPVGVAEVNQLLQKAARGAFRGIVDYTELPLVSMDF 288          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: E4PD_YERPN (D-erythrose-4-phosphate dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=epd PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.051e-22
Identity = 63/189 (33.33%), Postives = 89/189 (47.09%), Query Frame = 2
Query:    8 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            +GV+  RE    H+ +GAKKVL   PG  D+  T V GVN    + +  I+SNASCTTNC+ P +++LD  +GI  GT+TT HS   DQ                  +I+P  T                   I++RVPT N          +      EVN   +++A    +GI+   + PLVS+DF
Sbjct:  100 SGVYGSREDGEAHVASGAKKVLFAHPGGHDLDATVVYGVNHQDLRAEHRIVSNASCTTNCIIPIIQLLDIAYGIESGTVTTIHSSMNDQPVIDAYHQDLRRTRAASQSIIPVDTKLAAGITRIFPKFCDRFEAISVRVPTINVTAIDLSVSVTHPVGVAEVNQLLQKAARGAFRGIVDYTELPLVSMDF 288          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: E4PD_YERPE (D-erythrose-4-phosphate dehydrogenase OS=Yersinia pestis GN=epd PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.051e-22
Identity = 63/189 (33.33%), Postives = 89/189 (47.09%), Query Frame = 2
Query:    8 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            +GV+  RE    H+ +GAKKVL   PG  D+  T V GVN    + +  I+SNASCTTNC+ P +++LD  +GI  GT+TT HS   DQ                  +I+P  T                   I++RVPT N          +      EVN   +++A    +GI+   + PLVS+DF
Sbjct:  100 SGVYGSREDGEAHVASGAKKVLFAHPGGHDLDATVVYGVNHQDLRAEHRIVSNASCTTNCIIPIIQLLDIAYGIESGTVTTIHSSMNDQPVIDAYHQDLRRTRAASQSIIPVDTKLAAGITRIFPKFCDRFEAISVRVPTINVTAIDLSVSVTHPVGVAEVNQLLQKAARGAFRGIVDYTELPLVSMDF 288          
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Match: E4PD_YERPA (D-erythrose-4-phosphate dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=epd PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.051e-22
Identity = 63/189 (33.33%), Postives = 89/189 (47.09%), Query Frame = 2
Query:    8 TGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 571
            +GV+  RE    H+ +GAKKVL   PG  D+  T V GVN    + +  I+SNASCTTNC+ P +++LD  +GI  GT+TT HS   DQ                  +I+P  T                   I++RVPT N          +      EVN   +++A    +GI+   + PLVS+DF
Sbjct:  100 SGVYGSREDGEAHVASGAKKVLFAHPGGHDLDATVVYGVNHQDLRAEHRIVSNASCTTNCIIPIIQLLDIAYGIESGTVTTIHSSMNDQPVIDAYHQDLRRTRAASQSIIPVDTKLAAGITRIFPKFCDRFEAISVRVPTINVTAIDLSVSVTHPVGVAEVNQLLQKAARGAFRGIVDYTELPLVSMDF 288          
The following BLAST results are available for this feature:
BLAST of BQ623590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348
Match NameE-valueIdentityDescription
E4PD_ERWT99.509e-2434.92D-erythrose-4-phosphate dehydrogenase OS=Erwinia t... [more]
G3P_PLESA1.622e-2334.85Glyceraldehyde-3-phosphate dehydrogenase OS=Pleuro... [more]
E4PD_COLP33.613e-2333.16D-erythrose-4-phosphate dehydrogenase OS=Colwellia... [more]
G3P_STREQ4.719e-2335.94Glyceraldehyde-3-phosphate dehydrogenase OS=Strept... [more]
E4PD_YERE88.050e-2333.86D-erythrose-4-phosphate dehydrogenase OS=Yersinia ... [more]
G3P3_ECOLI1.051e-2237.37Putative glyceraldehyde-3-phosphate dehydrogenase ... [more]
E4PD_YERPS1.051e-2233.33D-erythrose-4-phosphate dehydrogenase OS=Yersinia ... [more]
E4PD_YERPN1.051e-2233.33D-erythrose-4-phosphate dehydrogenase OS=Yersinia ... [more]
E4PD_YERPE1.051e-2233.33D-erythrose-4-phosphate dehydrogenase OS=Yersinia ... [more]
E4PD_YERPA1.051e-2233.33D-erythrose-4-phosphate dehydrogenase OS=Yersinia ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00681 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00681 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623590 ID=BQ623590; Name=BQ623590; organism=Citrus sinensis; type=EST; length=637bp
TGAAGGGACAGGAGTGTTTGTAGACAGAGAGGGTGCGGGCAAGCACATTC
AGGCTGGTGCCAAGAAAGTACTTATTACAGCCCCCGGCAAGGGTGACATC
CCAACCTACGTTGTTGGTGTCAATGCGGATGCTTACAAACCAGATGAGCC
CATCATCAGCAATGCTTCTTGCACAACCAACTGCCTTGCCCCATTCGTCA
AGGTTCTTGACCAGAAGTTTGGCATTATCAAGGGAACCATGACCACCACA
CACTCGTACACTGGCGACCAAAGACTACTCGATGCTAGCCACCGTGACCT
CAGGCGTGCAAGAGCAGCTGCACTCAACATTGTCCCAACATCAACTGGTG
CGGCAAAAGCTGTGGCCCTTGTCCTCCCAGCACTCAAAGGCAAACTAAAC
GGCATTGCCCTTCGTGTGCCAACACCAAACGTCTCGGTTGTTGATCTTGT
CGTTCAGGTGTCCAAGAAAACCTTCGCAGAAGAGGTGAACGCCGCCTTCA
GAGAAAGCGCTGACAATGAGCTGAAAGGCATCCTCTCCGTGTGCGACGAG
CCCCTTGTTTCGGTCGACTTCAGGTGCTCTGATGTATCCTCACCGTTGAT
TCATCTCTCACACTTGTCATGGGAGACGACATGGTTA
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