BQ623592

Overview
NameBQ623592
Unique NameBQ623592
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length588
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8865 contig Csv1_Contig8865:76..662. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_OTOGA (Cytochrome c OS=Otolemur garnettii GN=CYCS PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.845e-28
Identity = 56/87 (64.37%), Postives = 69/87 (79.31%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQST 346
            QCHTV+KG  HK GPNL+GLFGR++G   G+SY+ ANKN  + W E TL +YL NPKKYIPGTKM+F G+KK  +RADLI YLK++T
Sbjct:   17 QCHTVDKGGKHKTGPNLHGLFGRKTGQAAGFSYTDANKNKGITWGEDTLMEYLENPKKYIPGTKMIFAGVKKKGERADLIDYLKKAT 103          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_NEUCR (Cytochrome c OS=Neurospora crassa GN=cyc-1 PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 2.283e-28
Identity = 52/88 (59.09%), Postives = 71/88 (80.68%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQSTA 349
            QCHT+E+G G+K GP L+GLFGR++G+  GY+Y+ ANK   + W+E TL++YL NPKKYIPGTKM F GLKK +DR D+I ++K++TA
Sbjct:   21 QCHTLEEGGGNKIGPALHGLFGRKTGSVDGYAYTDANKQKGITWDENTLFEYLENPKKYIPGTKMAFGGLKKDKDRNDIITFMKEATA 108          

HSP 2 Score: 23.8682 bits (50), Expect = 2.283e-28
Identity = 8/15 (53.33%), Postives = 12/15 (80.00%), Query Frame = 1
Query:   40 GNAKAGEKIFKTKCA 84
            G++K G  +FKT+CA
Sbjct:    6 GDSKKGANLFKTRCA 20          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_SAISC (Cytochrome c OS=Saimiri sciureus GN=CYCS PE=3 SV=3)

HSP 1 Score: 125.176 bits (313), Expect = 2.409e-28
Identity = 56/87 (64.37%), Postives = 69/87 (79.31%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQST 346
            QCHTVEKG  HK GPNL+GLFGR++G   G++Y+ ANKN  + W E TL +YL NPKKYIPGTKM+F G+KK  +R DLIAYLK++T
Sbjct:   17 QCHTVEKGGKHKTGPNLHGLFGRKTGQAAGFTYTEANKNKGIIWGEDTLMEYLENPKKYIPGTKMIFVGIKKKGEREDLIAYLKKAT 103          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_PICST (Cytochrome c OS=Pichia stipitis GN=CYC1 PE=3 SV=3)

HSP 1 Score: 124.79 bits (312), Expect = 2.972e-28
Identity = 56/87 (64.37%), Postives = 66/87 (75.86%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQST 346
            QCHTVE+G  HK GPNL+G+ GR+SG   GYSY+ ANK   V W E+T+ DYL NPKKYIPGTKM F GLKKP+DR DL+ YL  +T
Sbjct:   23 QCHTVEEGGPHKVGPNLHGIMGRKSGQAVGYSYTDANKKKGVEWSEQTMSDYLENPKKYIPGTKMAFGGLKKPKDRNDLVTYLASAT 109          

HSP 2 Score: 21.1718 bits (43), Expect = 2.972e-28
Identity = 7/14 (50.00%), Postives = 10/14 (71.43%), Query Frame = 1
Query:   40 GNAKAGEKIFKTKC 81
            G+ K G  +FKT+C
Sbjct:    8 GSEKKGATLFKTRC 21          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_GIBZE (Cytochrome c OS=Gibberella zeae GN=CYC1 PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.972e-28
Identity = 56/87 (64.37%), Postives = 68/87 (78.16%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQST 346
            QCHTVEK  G+K GP L+GL+GR++G+  GYSY+ ANK   + W + TL++YL NPKKYIPGTKM F GLKK +DR DLIAYLK ST
Sbjct:   22 QCHTVEKDGGNKIGPALHGLWGRKTGSVEGYSYTDANKQKGIEWNDDTLFEYLENPKKYIPGTKMAFGGLKKAKDRNDLIAYLKDST 108          

HSP 2 Score: 23.0978 bits (48), Expect = 2.972e-28
Identity = 8/15 (53.33%), Postives = 11/15 (73.33%), Query Frame = 1
Query:   40 GNAKAGEKIFKTKCA 84
            G+ K G  +FKT+CA
Sbjct:    7 GDIKKGANLFKTRCA 21          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_EISFO (Cytochrome c OS=Eisenia foetida PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.972e-28
Identity = 54/87 (62.07%), Postives = 68/87 (78.16%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQST 346
            QCHTV+KG  HK GPNL+G+FGR +G   G++Y+ ANK+  + W + TLY+YL NPKKYIPGTKMVF GLK  + RA+LIAYL+Q T
Sbjct:   21 QCHTVDKGGPHKTGPNLHGIFGRATGQAAGFAYTDANKSKGITWTKDTLYEYLENPKKYIPGTKMVFAGLKNEKQRANLIAYLEQET 107          

HSP 2 Score: 23.0978 bits (48), Expect = 2.972e-28
Identity = 8/17 (47.06%), Postives = 12/17 (70.59%), Query Frame = 1
Query:   34 PPGNAKAGEKIFKTKCA 84
            P G+ + G+ IFK +CA
Sbjct:    4 PAGDVEKGKTIFKQRCA 20          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_ROSNE (Cytochrome c OS=Rosellinia necatrix GN=CYTC PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 2.972e-28
Identity = 54/88 (61.36%), Postives = 69/88 (78.41%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQSTA 349
            QCHT+++G G+K GP L+GLFGR++G+  GY+Y+ ANK   + W E TL+ YL NPKKYIPGTKM F GLKK +DR DLI+YLK+ TA
Sbjct:   21 QCHTLKEGEGNKVGPALHGLFGRKTGSVEGYAYTDANKQKGIEWTEDTLFTYLENPKKYIPGTKMAFGGLKKDKDRNDLISYLKKETA 108          

HSP 2 Score: 25.0238 bits (53), Expect = 2.972e-28
Identity = 9/15 (60.00%), Postives = 12/15 (80.00%), Query Frame = 1
Query:   40 GNAKAGEKIFKTKCA 84
            G+ K GEK+F T+CA
Sbjct:    6 GDLKKGEKLFTTRCA 20          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_CURLU (Cytochrome c OS=Curvularia lunata PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 2.972e-28
Identity = 53/87 (60.92%), Postives = 67/87 (77.01%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQST 346
            QCHT++ G G+K GP L+GLFGR++G+  GYSY+ ANK   + W   TL++YL NPKKYIPGTKM F GLKKP+DR DLI +L+Q T
Sbjct:   21 QCHTLKAGEGNKIGPELHGLFGRKTGSVAGYSYTDANKQKGIEWNHDTLFEYLENPKKYIPGTKMAFGGLKKPKDRNDLITFLEQET 107          

HSP 2 Score: 25.0238 bits (53), Expect = 2.972e-28
Identity = 9/15 (60.00%), Postives = 12/15 (80.00%), Query Frame = 1
Query:   40 GNAKAGEKIFKTKCA 84
            G+AK G  +FKT+CA
Sbjct:    6 GDAKKGANLFKTRCA 20          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC1_ARATH (Cytochrome c OS=Arabidopsis thaliana GN=CC-1 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 2.972e-28
Identity = 52/87 (59.77%), Postives = 69/87 (79.31%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQST 346
            QCHT++ G G+K GP L+GLFGR++G+  GYSY+ ANK   + W++ TL++YL NPKKYIPGTKM F GLKKP+DR DLI +L++ T
Sbjct:   25 QCHTLKAGEGNKIGPELHGLFGRKTGSVAGYSYTDANKQKGIEWKDDTLFEYLENPKKYIPGTKMAFGGLKKPKDRNDLITFLEEET 111          

HSP 2 Score: 25.0238 bits (53), Expect = 2.972e-28
Identity = 9/15 (60.00%), Postives = 12/15 (80.00%), Query Frame = 1
Query:   40 GNAKAGEKIFKTKCA 84
            G+AK G  +FKT+CA
Sbjct:   10 GDAKKGANLFKTRCA 24          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_ASTRU (Cytochrome c OS=Asterias rubens PE=1 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 4.110e-28
Identity = 54/87 (62.07%), Postives = 69/87 (79.31%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQST 346
            QCHTVEK   HK GPNLNG+ GR++G   G+SY+ AN+N  + W+ +TL++YL NPKKYIPGTKMVF GLKK ++R DLIAYL+ +T
Sbjct:   17 QCHTVEKAGKHKTGPNLNGILGRKTGQAAGFSYTDANRNKGITWKNETLFEYLENPKKYIPGTKMVFAGLKKQKERQDLIAYLEAAT 103          
The following BLAST results are available for this feature:
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 171
Match NameE-valueIdentityDescription
CYC_OTOGA1.845e-2864.37Cytochrome c OS=Otolemur garnettii GN=CYCS PE=3 SV... [more]
CYC_NEUCR2.283e-2859.09Cytochrome c OS=Neurospora crassa GN=cyc-1 PE=1 SV... [more]
CYC_SAISC2.409e-2864.37Cytochrome c OS=Saimiri sciureus GN=CYCS PE=3 SV=3[more]
CYC_PICST2.972e-2864.37Cytochrome c OS=Pichia stipitis GN=CYC1 PE=3 SV=3[more]
CYC_GIBZE2.972e-2864.37Cytochrome c OS=Gibberella zeae GN=CYC1 PE=3 SV=1[more]
CYC_EISFO2.972e-2862.07Cytochrome c OS=Eisenia foetida PE=1 SV=1[more]
CYC_ROSNE2.972e-2861.36Cytochrome c OS=Rosellinia necatrix GN=CYTC PE=3 S... [more]
CYC_CURLU2.972e-2860.92Cytochrome c OS=Curvularia lunata PE=3 SV=1[more]
CYC1_ARATH2.972e-2859.77Cytochrome c OS=Arabidopsis thaliana GN=CC-1 PE=2 ... [more]
CYC_ASTRU4.110e-2862.07Cytochrome c OS=Asterias rubens PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00683 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00683 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623592 ID=BQ623592; Name=BQ623592; organism=Citrus sinensis; type=EST; length=588bp
AACACCACAATAATGGCGTCGTTTGATGAGGCACCTCCCGGCAATGCAAA
GGCCGGAGAGAAGATCTTCAAGACCAAGTGCGCCTCAGTGCCACACCGTC
GAGAAAGGCGCCGGTCACAAACAAGGTCCTAATTTGAACGGATTGTTTGG
AAGGCAATCGGGGACTACACCTGGGTACTCATACTCTGCGGCTAACAAGA
ACATGGCTGTGAATTGGGAGGAAAAGACTTTGTATGATTACTTGCTCAAC
CCTAAGAAGTACATTCCTGGAACAAAGATGGTATTCCCTGGATTGAAGAA
GCCTCAGGATCGTGCCGACCTTATTGCATATTTGAAACAATCTACTGCAT
AAGAACTTGCCGATAGTCAGTTTACCTATTCCATTTTGCAGTTGTTGAAG
ATTGTTTTGCGGTGCGGATATAGTACTGTTTTTTACCAATAAATTTTAAA
CATTTAAGGTTCAGCAATGTTCTTTGTAACTTGAGCATTGCTAATTTGAG
AAAAGGTTGCTGTCATTGGCAAACATAATATTCAATTGAATTTCCTGGTT
ATAATCATATTTCATGAATTTTGGGTGAAAAAAAAAAA
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