BQ623592

Overview
NameBQ623592
Unique NameBQ623592
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length588
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_USTSP (Cytochrome c OS=Ustilago sphaerogena PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.455e-27
Identity = 53/87 (60.92%), Postives = 65/87 (74.71%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQST 346
            QCHT+  G  +K GPNL+GLFGR+SGT  G+SY+ ANK     WEE+T  +YL NPKKYIPGTKM F GLKK +DR DL+ YL++ T
Sbjct:   20 QCHTLGAGEPNKVGPNLHGLFGRKSGTVEGFSYTDANKKAGQVWEEETFLEYLENPKKYIPGTKMAFGGLKKEKDRNDLVTYLREET 106          

HSP 2 Score: 26.5646 bits (57), Expect = 2.455e-27
Identity = 10/15 (66.67%), Postives = 13/15 (86.67%), Query Frame = 1
Query:   40 GNAKAGEKIFKTKCA 84
            G+AK G +IFKT+CA
Sbjct:    5 GDAKKGARIFKTRCA 19          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_ISSOR (Cytochrome c OS=Issatchenkia orientalis GN=CYC1 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 4.162e-27
Identity = 52/87 (59.77%), Postives = 63/87 (72.41%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQST 346
            QCHT+E G  HK GPNL+G+F R SG   GYSY+ ANK   V W E T+ DYL NPKKYIPGTKM F GLKK +DR DL+ Y+ +++
Sbjct:   22 QCHTIEAGGPHKVGPNLHGIFSRHSGQAEGYSYTDANKRAGVEWAEPTMSDYLENPKKYIPGTKMAFGGLKKAKDRNDLVTYMLEAS 108          

HSP 2 Score: 24.6386 bits (52), Expect = 4.162e-27
Identity = 9/15 (60.00%), Postives = 12/15 (80.00%), Query Frame = 1
Query:   40 GNAKAGEKIFKTKCA 84
            G+AK G  +FKT+CA
Sbjct:    7 GSAKKGATLFKTRCA 21          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_STELP (Cytochrome c OS=Stellaria longipes PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 4.162e-27
Identity = 52/87 (59.77%), Postives = 67/87 (77.01%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQST 346
            QCHT+ +G G+K GPNL+GLFGR +G+  G+SY+ ANK   + W + TL++YL NPKKYIPGTKM F GLKK +DR DLI +L+ ST
Sbjct:   21 QCHTLGEGEGNKIGPNLHGLFGRHTGSVEGFSYTDANKAKGIEWNKDTLFEYLENPKKYIPGTKMAFGGLKKDKDRNDLITFLQDST 107          

HSP 2 Score: 25.0238 bits (53), Expect = 4.162e-27
Identity = 9/15 (60.00%), Postives = 12/15 (80.00%), Query Frame = 1
Query:   40 GNAKAGEKIFKTKCA 84
            G+AK G  +FKT+CA
Sbjct:    6 GDAKKGANLFKTRCA 20          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC7_YEAST (Cytochrome c iso-2 OS=Saccharomyces cerevisiae GN=CYC7 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 7.056e-27
Identity = 51/86 (59.30%), Postives = 65/86 (75.58%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQS 343
            QCHT+E+G  +K GPNL+G+FGR SG   GYSY+ AN N  V W+E ++ +YL NPKKYIPGTKM F GLKK +DR DLI Y+ ++
Sbjct:   26 QCHTIEEGGPNKVGPNLHGIFGRHSGQVKGYSYTDANINKNVKWDEDSMSEYLTNPKKYIPGTKMAFAGLKKEKDRNDLITYMTKA 111          

HSP 2 Score: 25.7942 bits (55), Expect = 7.056e-27
Identity = 9/15 (60.00%), Postives = 12/15 (80.00%), Query Frame = 1
Query:   37 PGNAKAGEKIFKTKC 81
            PG+AK G  +FKT+C
Sbjct:   10 PGSAKKGATLFKTRC 24          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_THUAA (Cytochrome c OS=Thunnus alalunga GN=cyc PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 7.751e-27
Identity = 54/88 (61.36%), Postives = 66/88 (75.00%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQSTA 349
            QCHTVE G  HK GPNL GLFGR++G   GYSY+ ANK+  + W   TL +YL NPKKYIPGTKM+F G+KK  +R DL+AYLK +T+
Sbjct:   16 QCHTVENGGKHKVGPNLWGLFGRKTGQAEGYSYTDANKSKGIVWNNDTLMEYLENPKKYIPGTKMIFAGIKKKGERQDLVAYLKSATS 103          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_RANCA (Cytochrome c OS=Rana catesbeiana PE=1 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 9.186e-27
Identity = 54/86 (62.79%), Postives = 64/86 (74.42%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQS 343
            QCHT EKG  HK GPNL GL GR++G   G+SY+ ANKN  + W E TL +YL NPKKYIPGTKM+F G+KK  +R DLIAYLK +
Sbjct:   17 QCHTCEKGGKHKVGPNLYGLIGRKTGQAAGFSYTDANKNKGITWGEDTLMEYLENPKKYIPGTKMIFAGIKKKGERQDLIAYLKSA 102          

HSP 2 Score: 21.557 bits (44), Expect = 9.186e-27
Identity = 8/15 (53.33%), Postives = 11/15 (73.33%), Query Frame = 1
Query:   40 GNAKAGEKIFKTKCA 84
            G+ + G+KIF  KCA
Sbjct:    2 GDVEKGKKIFVQKCA 16          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_MACMA (Cytochrome c OS=Macrobrachium malcolmsonii PE=1 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 1.012e-26
Identity = 56/87 (64.37%), Postives = 64/87 (73.56%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQST 346
            QCH+ +    HK GPNLNGLFGRQ+G   GY Y+ ANK   + W+  TL  YL NPKKYIPGTKMVF GLKK  +RADLIAYLKQ+T
Sbjct:   17 QCHSAQANLKHKTGPNLNGLFGRQTGQASGYVYTDANKAKGITWQADTLDVYLENPKKYIPGTKMVFAGLKKANERADLIAYLKQAT 103          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_DEBHA (Cytochrome c OS=Debaryomyces hansenii GN=CYC1 PE=1 SV=3)

HSP 1 Score: 118.627 bits (296), Expect = 1.557e-26
Identity = 55/87 (63.22%), Postives = 65/87 (74.71%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQST 346
            QCHTVE+G  HK GPNL+G+ GR SG   G+SY+ ANK   V W E+ L DYL NPKKYIPGTKM F GLKK +DR DLI+YL ++T
Sbjct:   23 QCHTVEEGGPHKVGPNLHGVVGRTSGQAQGFSYTDANKKKGVEWSEQNLSDYLENPKKYIPGTKMAFGGLKKAKDRNDLISYLVKAT 109          

HSP 2 Score: 21.557 bits (44), Expect = 1.557e-26
Identity = 7/14 (50.00%), Postives = 10/14 (71.43%), Query Frame = 1
Query:   40 GNAKAGEKIFKTKC 81
            G+ K G  +FKT+C
Sbjct:    8 GSEKKGANLFKTRC 21          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC1_ASCSU (Cytochrome c type-1 OS=Ascaris suum PE=1 SV=3)

HSP 1 Score: 113.235 bits (282), Expect = 5.823e-26
Identity = 52/85 (61.18%), Postives = 64/85 (75.29%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQ 340
            QCH V+  A  K GP L+G+ GR+SG  PG+ YS ANKN  V W  +TL++YLLNPKKYIPGTKMVF GLKK  +RADLI Y+++
Sbjct:   22 QCHVVDSKAT-KTGPTLHGIIGRKSGAVPGFDYSTANKNKGVVWTRETLFEYLLNPKKYIPGTKMVFAGLKKADERADLIKYIEE 105          

HSP 2 Score: 25.0238 bits (53), Expect = 5.823e-26
Identity = 8/18 (44.44%), Postives = 14/18 (77.78%), Query Frame = 1
Query:   28 EAPPGNAKAGEKIFKTKC 81
            E P G+ ++G+K+FK +C
Sbjct:    3 EIPEGDYESGKKVFKQRC 20          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_DICDI (Cytochrome c OS=Dictyostelium discoideum GN=cytC PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 7.580e-26
Identity = 55/90 (61.11%), Postives = 65/90 (72.22%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKN---MAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQST 346
            QCHT   GA +KQGPNL GLF  +S + PGY+YS  NKN     + W E+TL+DYL NPKKYIP TKM F G K  QDRAD++AYL+QST
Sbjct:   23 QCHTTANGAPNKQGPNLYGLFFPKSRSFPGYAYSDPNKNTGKFCIMWGEQTLFDYLENPKKYIPKTKMAFAGFKSEQDRADVVAYLEQST 112          

HSP 2 Score: 24.6386 bits (52), Expect = 7.580e-26
Identity = 8/15 (53.33%), Postives = 12/15 (80.00%), Query Frame = 1
Query:   40 GNAKAGEKIFKTKCA 84
            GN + G+K+FK +CA
Sbjct:    8 GNVENGDKLFKARCA 22          
The following BLAST results are available for this feature:
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 171
Match NameE-valueIdentityDescription
CYC_USTSP2.455e-2760.92Cytochrome c OS=Ustilago sphaerogena PE=1 SV=1[more]
CYC_ISSOR4.162e-2759.77Cytochrome c OS=Issatchenkia orientalis GN=CYC1 PE... [more]
CYC_STELP4.162e-2759.77Cytochrome c OS=Stellaria longipes PE=3 SV=1[more]
CYC7_YEAST7.056e-2759.30Cytochrome c iso-2 OS=Saccharomyces cerevisiae GN=... [more]
CYC_THUAA7.751e-2761.36Cytochrome c OS=Thunnus alalunga GN=cyc PE=1 SV=1[more]
CYC_RANCA9.186e-2762.79Cytochrome c OS=Rana catesbeiana PE=1 SV=2[more]
CYC_MACMA1.012e-2664.37Cytochrome c OS=Macrobrachium malcolmsonii PE=1 SV... [more]
CYC_DEBHA1.557e-2663.22Cytochrome c OS=Debaryomyces hansenii GN=CYC1 PE=1... [more]
CYC1_ASCSU5.823e-2661.18Cytochrome c type-1 OS=Ascaris suum PE=1 SV=3[more]
CYC_DICDI7.580e-2661.11Cytochrome c OS=Dictyostelium discoideum GN=cytC P... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00683 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00683 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623592 ID=BQ623592; Name=BQ623592; organism=Citrus sinensis; type=EST; length=588bp
AACACCACAATAATGGCGTCGTTTGATGAGGCACCTCCCGGCAATGCAAA
GGCCGGAGAGAAGATCTTCAAGACCAAGTGCGCCTCAGTGCCACACCGTC
GAGAAAGGCGCCGGTCACAAACAAGGTCCTAATTTGAACGGATTGTTTGG
AAGGCAATCGGGGACTACACCTGGGTACTCATACTCTGCGGCTAACAAGA
ACATGGCTGTGAATTGGGAGGAAAAGACTTTGTATGATTACTTGCTCAAC
CCTAAGAAGTACATTCCTGGAACAAAGATGGTATTCCCTGGATTGAAGAA
GCCTCAGGATCGTGCCGACCTTATTGCATATTTGAAACAATCTACTGCAT
AAGAACTTGCCGATAGTCAGTTTACCTATTCCATTTTGCAGTTGTTGAAG
ATTGTTTTGCGGTGCGGATATAGTACTGTTTTTTACCAATAAATTTTAAA
CATTTAAGGTTCAGCAATGTTCTTTGTAACTTGAGCATTGCTAATTTGAG
AAAAGGTTGCTGTCATTGGCAAACATAATATTCAATTGAATTTCCTGGTT
ATAATCATATTTCATGAATTTTGGGTGAAAAAAAAAAA
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