BQ623592

Overview
NameBQ623592
Unique NameBQ623592
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length588
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8865 contig Csv1_Contig8865:76..662. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_ENTIN (Cytochrome c OS=Enteromorpha intestinalis PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 7.539e-40
Identity = 65/88 (73.86%), Postives = 77/88 (87.50%), Query Frame = 2 
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQSTA 349
            +CHTV+ GAGHKQGPNLNG FGR SGT  G+SYSAA+K+   +W++ TLYDYLLNPKKYIPGTKMVF GLKKP++RADLIA+LK +TA
Sbjct:   24 ZCHTVBAGAGHKQGPNLNGAFGRTSGTAAGFSYSAABKBKTADWBZBTLYDYLLNPKKYIPGTKMVFAGLKKPZBRADLIAFLKDATA 111

HSP 2 Score: 33.4982 bits (75), Expect = 7.539e-40
Identity = 13/23 (56.52%), Postives = 17/23 (73.91%), Query Frame = 1 
Query:   16 ASFDEAPPGNAKAGEKIFKTKCA 84
            ++F +APPG+   G KIFK KCA
Sbjct:    1 STFABAPPGBPAKGAKIFKAKCA 23
[Close]
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_CHLRE (Cytochrome c OS=Chlamydomonas reinhardtii GN=CYC1 PE=3 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 4.808e-39
Identity = 66/88 (75.00%), Postives = 73/88 (82.95%), Query Frame = 2 
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQSTA 349
            QCH  EKG GHKQGPNL GLFGR SGT  G++YS ANK  AV W E TLY+YLLNPKKY+PG KMVF GLKKP++RADLIAYLKQ+TA
Sbjct:   25 QCHVAEKGGGHKQGPNLGGLFGRVSGTAAGFAYSKANKEAAVTWGESTLYEYLLNPKKYMPGNKMVFAGLKKPEERADLIAYLKQATA 112

HSP 2 Score: 36.965 bits (84), Expect = 4.808e-39
Identity = 16/24 (66.67%), Postives = 19/24 (79.17%), Query Frame = 1 
Query:   13 MASFDEAPPGNAKAGEKIFKTKCA 84
            M++F EAP G+   GEKIFKTKCA
Sbjct:    1 MSTFAEAPAGDLARGEKIFKTKCA 24
[Close]
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_SCHGR (Cytochrome c OS=Schistocerca gregaria PE=1 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 2.206e-32
Identity = 61/87 (70.11%), Postives = 73/87 (83.91%), Query Frame = 2 
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQST 346
            QCHTVE G  HK GPNL+GLFGR++G  PG+SY+ ANK+  + W+E TL+ YL NPKKYIPGTKMVF GLKKP++RADLIAYLK+ST
Sbjct:   21 QCHTVEAGGKHKTGPNLHGLFGRKTGQAPGFSYTDANKSKGITWDENTLFIYLENPKKYIPGTKMVFAGLKKPEERADLIAYLKEST 107

HSP 2 Score: 22.7126 bits (47), Expect = 2.206e-32
Identity = 8/17 (47.06%), Postives = 12/17 (70.59%), Query Frame = 1 
Query:   34 PPGNAKAGEKIFKTKCA 84
            P G+ + G+KIF  +CA
Sbjct:    4 PQGDVEKGKKIFVQRCA 20
[Close]
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_MACSY (Cytochrome c OS=Macaca sylvanus GN=CYCS PE=3 SV=3)

HSP 1 Score: 137.502 bits (345), Expect = 4.691e-32
Identity = 61/87 (70.11%), Postives = 73/87 (83.91%), Query Frame = 2 
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQST 346
            QCHTVEKG  HK GPNL+GLFGR++G  PGYSY+AANKN  + W E TL +YL NPKKYIPGTKM+F G+KK ++RADLIAYLK++T
Sbjct:   17 QCHTVEKGGKHKTGPNLHGLFGRKTGQAPGYSYTAANKNKGITWGEDTLMEYLENPKKYIPGTKMIFVGIKKKEERADLIAYLKKAT 103
[Close]
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_MACMU (Cytochrome c OS=Macaca mulatta GN=CYCS PE=1 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 4.691e-32
Identity = 61/87 (70.11%), Postives = 73/87 (83.91%), Query Frame = 2 
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQST 346
            QCHTVEKG  HK GPNL+GLFGR++G  PGYSY+AANKN  + W E TL +YL NPKKYIPGTKM+F G+KK ++RADLIAYLK++T
Sbjct:   17 QCHTVEKGGKHKTGPNLHGLFGRKTGQAPGYSYTAANKNKGITWGEDTLMEYLENPKKYIPGTKMIFVGIKKKEERADLIAYLKKAT 103
[Close]
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_PONAB (Cytochrome c OS=Pongo abelii GN=CYCS PE=3 SV=3)

HSP 1 Score: 136.346 bits (342), Expect = 1.045e-31
Identity = 61/87 (70.11%), Postives = 73/87 (83.91%), Query Frame = 2 
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQST 346
            QCHTVEKG  HK GPNL+GLFGR++G  PGYSY+AANKN  + W E TL +YL NPKKYIPGTKM+F G+KK ++RADLIAYLK++T
Sbjct:   17 QCHTVEKGGKHKTGPNLHGLFGRKTGQAPGYSYTAANKNKGIIWGEDTLMEYLENPKKYIPGTKMIFVGIKKKEERADLIAYLKKAT 103
[Close]
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_PANTR (Cytochrome c OS=Pan troglodytes GN=CYCS PE=1 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 1.045e-31
Identity = 61/87 (70.11%), Postives = 73/87 (83.91%), Query Frame = 2 
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQST 346
            QCHTVEKG  HK GPNL+GLFGR++G  PGYSY+AANKN  + W E TL +YL NPKKYIPGTKM+F G+KK ++RADLIAYLK++T
Sbjct:   17 QCHTVEKGGKHKTGPNLHGLFGRKTGQAPGYSYTAANKNKGIIWGEDTLMEYLENPKKYIPGTKMIFVGIKKKEERADLIAYLKKAT 103
[Close]
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_HUMAN (Cytochrome c OS=Homo sapiens GN=CYCS PE=1 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 1.045e-31
Identity = 61/87 (70.11%), Postives = 73/87 (83.91%), Query Frame = 2 
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQST 346
            QCHTVEKG  HK GPNL+GLFGR++G  PGYSY+AANKN  + W E TL +YL NPKKYIPGTKM+F G+KK ++RADLIAYLK++T
Sbjct:   17 QCHTVEKGGKHKTGPNLHGLFGRKTGQAPGYSYTAANKNKGIIWGEDTLMEYLENPKKYIPGTKMIFVGIKKKEERADLIAYLKKAT 103
[Close]
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_GORGO (Cytochrome c OS=Gorilla gorilla gorilla GN=CYCS PE=3 SV=3)

HSP 1 Score: 136.346 bits (342), Expect = 1.045e-31
Identity = 61/87 (70.11%), Postives = 73/87 (83.91%), Query Frame = 2 
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQST 346
            QCHTVEKG  HK GPNL+GLFGR++G  PGYSY+AANKN  + W E TL +YL NPKKYIPGTKM+F G+KK ++RADLIAYLK++T
Sbjct:   17 QCHTVEKGGKHKTGPNLHGLFGRKTGQAPGYSYTAANKNKGIIWGEDTLMEYLENPKKYIPGTKMIFVGIKKKEERADLIAYLKKAT 103
[Close]
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_HIPAM (Cytochrome c OS=Hippopotamus amphibius GN=CYCS PE=1 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 1.827e-31
Identity = 60/87 (68.97%), Postives = 73/87 (83.91%), Query Frame = 2 
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQST 346
            QCHTVEKG  HK GPNL+GLFGR++G +PG+SY+ ANKN  + W E+TL +YL NPKKYIPGTKM+F G+KK  +RADLIAYLKQ+T
Sbjct:   17 QCHTVEKGGKHKTGPNLHGLFGRKTGQSPGFSYTDANKNKGITWGEETLMEYLENPKKYIPGTKMIFAGIKKKGERADLIAYLKQAT 103

HSP 2 Score: 21.557 bits (44), Expect = 1.827e-31
Identity = 8/15 (53.33%), Postives = 11/15 (73.33%), Query Frame = 1 
Query:   40 GNAKAGEKIFKTKCA 84
            G+ + G+KIF  KCA
Sbjct:    2 GDVEKGKKIFVQKCA 16
The following BLAST results are available for this feature:
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 171
Match NameE-valueIdentityDescription
CYC_ENTIN7.539e-4073.86Cytochrome c OS=Enteromorpha intestinalis PE=1 SV=... [more]
CYC_CHLRE4.808e-3975.00Cytochrome c OS=Chlamydomonas reinhardtii GN=CYC1 ... [more]
CYC_SCHGR2.206e-3270.11Cytochrome c OS=Schistocerca gregaria PE=1 SV=2[more]
CYC_MACSY4.691e-3270.11Cytochrome c OS=Macaca sylvanus GN=CYCS PE=3 SV=3[more]
CYC_MACMU4.691e-3270.11Cytochrome c OS=Macaca mulatta GN=CYCS PE=1 SV=2[more]
CYC_PONAB1.045e-3170.11Cytochrome c OS=Pongo abelii GN=CYCS PE=3 SV=3[more]
CYC_PANTR1.045e-3170.11Cytochrome c OS=Pan troglodytes GN=CYCS PE=1 SV=2[more]
CYC_HUMAN1.045e-3170.11Cytochrome c OS=Homo sapiens GN=CYCS PE=1 SV=2[more]
CYC_GORGO1.045e-3170.11Cytochrome c OS=Gorilla gorilla gorilla GN=CYCS PE... [more]
CYC_HIPAM1.827e-3168.97Cytochrome c OS=Hippopotamus amphibius GN=CYCS PE=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00683 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00683 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623592 ID=BQ623592; Name=BQ623592; organism=Citrus sinensis; type=EST; length=588bp
AACACCACAATAATGGCGTCGTTTGATGAGGCACCTCCCGGCAATGCAAA
GGCCGGAGAGAAGATCTTCAAGACCAAGTGCGCCTCAGTGCCACACCGTC
GAGAAAGGCGCCGGTCACAAACAAGGTCCTAATTTGAACGGATTGTTTGG
AAGGCAATCGGGGACTACACCTGGGTACTCATACTCTGCGGCTAACAAGA
ACATGGCTGTGAATTGGGAGGAAAAGACTTTGTATGATTACTTGCTCAAC
CCTAAGAAGTACATTCCTGGAACAAAGATGGTATTCCCTGGATTGAAGAA
GCCTCAGGATCGTGCCGACCTTATTGCATATTTGAAACAATCTACTGCAT
AAGAACTTGCCGATAGTCAGTTTACCTATTCCATTTTGCAGTTGTTGAAG
ATTGTTTTGCGGTGCGGATATAGTACTGTTTTTTACCAATAAATTTTAAA
CATTTAAGGTTCAGCAATGTTCTTTGTAACTTGAGCATTGCTAATTTGAG
AAAAGGTTGCTGTCATTGGCAAACATAATATTCAATTGAATTTCCTGGTT
ATAATCATATTTCATGAATTTTGGGTGAAAAAAAAAAA
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