BQ623592

Overview
NameBQ623592
Unique NameBQ623592
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length588
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8865 contig Csv1_Contig8865:76..662. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_THELA (Cytochrome c OS=Thermomyces lanuginosus PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.098e-29
Identity = 54/87 (62.07%), Postives = 69/87 (79.31%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQST 346
            QCH+VE+G  +K GPNL+GLFGR++G+  GYSY+ ANK   + W E TL++YL NPKK+IPGTKM F GLKK +DR DLI YLK++T
Sbjct:   24 QCHSVEQGGANKIGPNLHGLFGRKTGSVEGYSYTDANKQAGITWNEDTLFEYLENPKKFIPGTKMAFGGLKKNKDRNDLITYLKEAT 110          

HSP 2 Score: 25.7942 bits (55), Expect = 6.098e-29
Identity = 9/16 (56.25%), Postives = 12/16 (75.00%), Query Frame = 1
Query:   37 PGNAKAGEKIFKTKCA 84
            PG+A  G  +FKT+CA
Sbjct:    8 PGDASKGANLFKTRCA 23          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_TARBA (Cytochrome c OS=Tarsius bancanus GN=CYCS PE=3 SV=3)

HSP 1 Score: 126.331 bits (316), Expect = 7.941e-29
Identity = 57/87 (65.52%), Postives = 69/87 (79.31%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQST 346
            QCHTVEKG  HK G NL+GLFGR++G   G+SY+ ANKN  + W E TL +YL NPKKYIPGTKM+F G+KK  +RADLIAYLK++T
Sbjct:   17 QCHTVEKGGKHKTGXNLHGLFGRKTGQAAGFSYTDANKNKGITWGEDTLMEYLENPKKYIPGTKMIFAGIKKKGERADLIAYLKKAT 103          

HSP 2 Score: 21.557 bits (44), Expect = 7.941e-29
Identity = 8/15 (53.33%), Postives = 11/15 (73.33%), Query Frame = 1
Query:   40 GNAKAGEKIFKTKCA 84
            G+ + G+KIF  KCA
Sbjct:    2 GDVEKGKKIFVQKCA 16          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_SCHPO (Cytochrome c OS=Schizosaccharomyces pombe GN=cyc1 PE=1 SV=3)

HSP 1 Score: 122.094 bits (305), Expect = 7.941e-29
Identity = 52/88 (59.09%), Postives = 70/88 (79.55%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQSTA 349
            QCHTVEKG  +K GPNL+G+FGR++G   G+SY+ AN++  + W+E+TL+ YL NPKKYIPGTKM F G KKP DR ++I YLK++T+
Sbjct:   21 QCHTVEKGGANKVGPNLHGVFGRKTGQAEGFSYTEANRDKGITWDEETLFAYLENPKKYIPGTKMAFAGFKKPADRNNVITYLKKATS 108          

HSP 2 Score: 25.7942 bits (55), Expect = 7.941e-29
Identity = 9/16 (56.25%), Postives = 12/16 (75.00%), Query Frame = 1
Query:   37 PGNAKAGEKIFKTKCA 84
            PG+ K G  +FKT+CA
Sbjct:    5 PGDEKKGASLFKTRCA 20          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_LAMTR (Cytochrome c OS=Lampetra tridentata GN=cyc PE=1 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 8.281e-29
Identity = 56/88 (63.64%), Postives = 71/88 (80.68%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQSTA 349
            QCHTVEK   HK GPNL+GLFGR++G  PG+SY+ ANK+  + W ++TL+ YL NPKKYIPGTKM+F G+KK  +R DLIAYLK+ST+
Sbjct:   17 QCHTVEKAGKHKTGPNLSGLFGRKTGQAPGFSYTDANKSKGIVWNQETLFVYLENPKKYIPGTKMIFAGIKKEGERKDLIAYLKKSTS 104          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_HANAN (Cytochrome c OS=Hansenula anomala PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.346e-28
Identity = 58/87 (66.67%), Postives = 66/87 (75.86%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQST 346
            QCHTVEKG  HK GPNL+G+FGRQSG   GYSY+ AN   AV W E+T+ DYL NPKKYIPGTKM F GLKK +DR DL+ YL  +T
Sbjct:   22 QCHTVEKGGPHKVGPNLHGIFGRQSGKAEGYSYTDANIKKAVEWSEQTMSDYLENPKKYIPGTKMAFGGLKKEKDRNDLVTYLANAT 108          

HSP 2 Score: 21.1718 bits (43), Expect = 1.346e-28
Identity = 7/14 (50.00%), Postives = 10/14 (71.43%), Query Frame = 1
Query:   40 GNAKAGEKIFKTKC 81
            G+ K G  +FKT+C
Sbjct:    7 GSEKKGATLFKTRC 20          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC1B_XENLA (Cytochrome c, somatic B OS=Xenopus laevis GN=cycs-B PE=3 SV=3)

HSP 1 Score: 125.561 bits (314), Expect = 1.346e-28
Identity = 57/88 (64.77%), Postives = 70/88 (79.55%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQSTA 349
            QCHTVEK   HK GPNL GLFGR++G  PG+SY+ ANK+  + W E+TL +YL NPKKYIPGTKM+F G+KK  +R DLIAYLK+ST+
Sbjct:   17 QCHTVEKTGKHKTGPNLWGLFGRKTGQAPGFSYTDANKSKGIVWGEETLLEYLENPKKYIPGTKMIFAGIKKKNERLDLIAYLKKSTS 104          

HSP 2 Score: 21.557 bits (44), Expect = 1.346e-28
Identity = 9/15 (60.00%), Postives = 11/15 (73.33%), Query Frame = 1
Query:   40 GNAKAGEKIFKTKCA 84
            G+A  G+KIF  KCA
Sbjct:    2 GDAGKGKKIFIQKCA 16          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC2_DROME (Cytochrome c-2 OS=Drosophila melanogaster GN=Cyt-c-p PE=1 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 1.346e-28
Identity = 55/87 (63.22%), Postives = 67/87 (77.01%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQST 346
            QCHTVE G  HK GPNL+GL GR++G   G++Y+ ANK   + W E TL++YL NPKKYIPGTKM+F GLKKP +R DLIAYLK +T
Sbjct:   21 QCHTVEAGGKHKVGPNLHGLIGRKTGQAAGFAYTDANKAKGITWNEDTLFEYLENPKKYIPGTKMIFAGLKKPNERGDLIAYLKSAT 107          

HSP 2 Score: 21.9422 bits (45), Expect = 1.346e-28
Identity = 7/17 (41.18%), Postives = 12/17 (70.59%), Query Frame = 1
Query:   34 PPGNAKAGEKIFKTKCA 84
            P G+ + G+K+F  +CA
Sbjct:    4 PAGDVEKGKKLFVQRCA 20          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC2_CERCA (Cytochrome c-2 OS=Ceratitis capitata PE=1 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 1.346e-28
Identity = 55/87 (63.22%), Postives = 67/87 (77.01%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQST 346
            QCHTVE G  HK GPNL+GL GR++G   G++Y+ ANK   + W E TL++YL NPKKYIPGTKM+F GLKKP +R DLIAYLK +T
Sbjct:   21 QCHTVEAGGKHKVGPNLHGLIGRKTGQAAGFAYTDANKAKGITWNEDTLFEYLENPKKYIPGTKMIFAGLKKPNERGDLIAYLKSAT 107          

HSP 2 Score: 21.9422 bits (45), Expect = 1.346e-28
Identity = 7/17 (41.18%), Postives = 12/17 (70.59%), Query Frame = 1
Query:   34 PPGNAKAGEKIFKTKCA 84
            P G+ + G+K+F  +CA
Sbjct:    4 PAGDVEKGKKLFVQRCA 20          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_THEAN (Cytochrome c OS=Theileria annulata GN=TA12950 PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.346e-28
Identity = 57/88 (64.77%), Postives = 71/88 (80.68%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQSTA 349
            QCHT+ KG   KQGPNL G +GR+SG+T  Y+YS ANKN  + W +K L+ YL+NPK+YIPGTKMVF GLKK QDRADLIAYLK++++
Sbjct:   28 QCHTINKGGSVKQGPNLFGFYGRKSGSTD-YAYSDANKNSGIVWSDKHLFVYLVNPKQYIPGTKMVFAGLKKEQDRADLIAYLKEASS 114          

HSP 2 Score: 24.6386 bits (52), Expect = 1.346e-28
Identity = 9/17 (52.94%), Postives = 12/17 (70.59%), Query Frame = 1
Query:   34 PPGNAKAGEKIFKTKCA 84
            P G+   G K+FK+KCA
Sbjct:   11 PEGDPAKGAKLFKSKCA 27          
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Match: CYC_THEPA (Cytochrome c OS=Theileria parva GN=TP02_0396 PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.753e-28
Identity = 56/88 (63.64%), Postives = 70/88 (79.55%), Query Frame = 2
Query:   86 QCHTVEKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKQSTA 349
            QCHT+ KG   KQGPNL G +GR+SG +  Y+YS ANKN  + W +K L+ YL+NPK+YIPGTKMVF GLKK QDRADLIAYLK++++
Sbjct:   28 QCHTINKGGSVKQGPNLYGFYGRKSGASD-YAYSDANKNSGIVWSDKHLFVYLVNPKQYIPGTKMVFAGLKKEQDRADLIAYLKEASS 114          

HSP 2 Score: 25.7942 bits (55), Expect = 1.753e-28
Identity = 9/17 (52.94%), Postives = 13/17 (76.47%), Query Frame = 1
Query:   34 PPGNAKAGEKIFKTKCA 84
            P G++  G K+FK+KCA
Sbjct:   11 PEGDSSKGAKLFKSKCA 27          
The following BLAST results are available for this feature:
BLAST of BQ623592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 171
Match NameE-valueIdentityDescription
CYC_THELA6.098e-2962.07Cytochrome c OS=Thermomyces lanuginosus PE=1 SV=1[more]
CYC_TARBA7.941e-2965.52Cytochrome c OS=Tarsius bancanus GN=CYCS PE=3 SV=3[more]
CYC_SCHPO7.941e-2959.09Cytochrome c OS=Schizosaccharomyces pombe GN=cyc1 ... [more]
CYC_LAMTR8.281e-2963.64Cytochrome c OS=Lampetra tridentata GN=cyc PE=1 SV... [more]
CYC_HANAN1.346e-2866.67Cytochrome c OS=Hansenula anomala PE=1 SV=1[more]
CYC1B_XENLA1.346e-2864.77Cytochrome c, somatic B OS=Xenopus laevis GN=cycs-... [more]
CYC2_DROME1.346e-2863.22Cytochrome c-2 OS=Drosophila melanogaster GN=Cyt-c... [more]
CYC2_CERCA1.346e-2863.22Cytochrome c-2 OS=Ceratitis capitata PE=1 SV=2[more]
CYC_THEAN1.346e-2864.77Cytochrome c OS=Theileria annulata GN=TA12950 PE=3... [more]
CYC_THEPA1.753e-2863.64Cytochrome c OS=Theileria parva GN=TP02_0396 PE=3 ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00683 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00683 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623592 ID=BQ623592; Name=BQ623592; organism=Citrus sinensis; type=EST; length=588bp
AACACCACAATAATGGCGTCGTTTGATGAGGCACCTCCCGGCAATGCAAA
GGCCGGAGAGAAGATCTTCAAGACCAAGTGCGCCTCAGTGCCACACCGTC
GAGAAAGGCGCCGGTCACAAACAAGGTCCTAATTTGAACGGATTGTTTGG
AAGGCAATCGGGGACTACACCTGGGTACTCATACTCTGCGGCTAACAAGA
ACATGGCTGTGAATTGGGAGGAAAAGACTTTGTATGATTACTTGCTCAAC
CCTAAGAAGTACATTCCTGGAACAAAGATGGTATTCCCTGGATTGAAGAA
GCCTCAGGATCGTGCCGACCTTATTGCATATTTGAAACAATCTACTGCAT
AAGAACTTGCCGATAGTCAGTTTACCTATTCCATTTTGCAGTTGTTGAAG
ATTGTTTTGCGGTGCGGATATAGTACTGTTTTTTACCAATAAATTTTAAA
CATTTAAGGTTCAGCAATGTTCTTTGTAACTTGAGCATTGCTAATTTGAG
AAAAGGTTGCTGTCATTGGCAAACATAATATTCAATTGAATTTCCTGGTT
ATAATCATATTTCATGAATTTTGGGTGAAAAAAAAAAA
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