BQ623594

Overview
NameBQ623594
Unique NameBQ623594
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length427
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: PUB51_ARATH (U-box domain-containing protein 51 OS=Arabidopsis thaliana GN=PUB51 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 9.001e-12
Identity = 36/83 (43.37%), Postives = 56/83 (67.47%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLS---NQAPDMAARL-HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGR 242
            I+HRD+K +N+L+  ++V+KI D  LS   N  P  A+ + + T  +GTF Y  PEY  TG +  +SD+Y+FG++LL+L+T R
Sbjct:  553 IVHRDLKPANILLDRNNVSKIGDVGLSKMVNLDPSHASTVFNETGPVGTFFYIDPEYQRTGVVTPESDIYAFGIILLQLVTAR 635          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: Y4885_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 1.176e-11
Identity = 38/84 (45.24%), Postives = 53/84 (63.10%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQA-PDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 254
            I+HRDI S N+L+ +D  AKI+DF  +    PD +   + + V GT+GY APE A   ++  K DVYSFGV+ LE++ G  P D
Sbjct:  901 IVHRDISSGNILLGEDYEAKISDFGTAKLLKPDSS---NWSAVAGTYGYVAPELAYAMKVTEKCDVYSFGVLTLEVIKGEHPGD 981          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: Y1124_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g12460 OS=Arabidopsis thaliana GN=At1g12460 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.176e-11
Identity = 42/115 (36.52%), Postives = 61/115 (53.04%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTG-QLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARL 347
            I+H ++KS+N+L+ +   AK++D+ L    P M +   + +     GY APE A    + + K DVYS+GVVLLEL+TGRKPV+         L  +    L       C D RL
Sbjct:  723 ILHLNVKSTNILLDERYEAKLSDYGLEKFLPVMDSFGLTKKFHNAVGYIAPELAQQSLRASEKCDVYSYGVVLLELVTGRKPVESPSENQVLILRDYVRDLLETGSASDCFDRRL 837          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: Y1719_ARATH (Probable inactive receptor kinase At1g27190 OS=Arabidopsis thaliana GN=At1g27190 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.535e-11
Identity = 43/109 (39.45%), Postives = 62/109 (56.88%), Query Frame = 3
Query:   27 SSNVLIFDDDV-AKIADFDLSNQ--APDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKP--VDHTLPRGQQSLVTWATPKLSEDKVRQCVD 338
            SSNV++ DDD  A+I D+ L+    + D      +   LG  GY APEY+ T   + K DVY FG+VLLEL+TG+KP  V + +   + SLV W +  L   + +  +D
Sbjct:  428 SSNVILLDDDFDARITDYGLAKLVGSRDSNDSSFNNGDLGELGYVAPEYSSTMVASLKGDVYGFGIVLLELVTGQKPLSVINGVEGFKGSLVDWVSQYLGTGRSKDAID 536          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: PUB35_ARATH (U-box domain-containing protein 35 OS=Arabidopsis thaliana GN=PUB35 PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 1.535e-11
Identity = 35/87 (40.23%), Postives = 56/87 (64.37%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSN--QAPDMAARL---HSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPV 251
            IIHRD+K +N+L+  + V+K+ D  LS   Q   ++ +      T  +GT  Y  PEY  TG++++KSD+YSFG++LL+LLT +  +
Sbjct:  598 IIHRDLKPANILLDHNFVSKVGDVGLSTMVQVDPLSTKFTIYKQTSPVGTLCYIDPEYQRTGRISSKSDIYSFGMILLQLLTAKPAI 684          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: PUB33_ARATH (U-box domain-containing protein 33 OS=Arabidopsis thaliana GN=PUB33 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 1.535e-11
Identity = 33/79 (41.77%), Postives = 51/79 (64.56%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGR 242
            ++H D+K +N+L+  + V+K++DF   +      ++   T V GT  Y  PE + +G+L  KSDVYSFG++LL LLTGR
Sbjct:  599 LVHGDLKPANILLDSNLVSKLSDFGTCSLLHPNGSKSVRTDVTGTVAYLDPEASSSGELTPKSDVYSFGIILLRLLTGR 677          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: PK1_STRTO (Serine/threonine-protein kinase PK-1 OS=Streptomyces toyocaensis GN=spk1 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.535e-11
Identity = 40/86 (46.51%), Postives = 50/86 (58.14%), Query Frame = 3
Query:    9 IHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLP 266
            +HRD+K  NVLI DD   K+ADF L  +A D       T VLGT  Y APE    G  + + DVY+ G++L E+LTG KP D   P
Sbjct:  138 VHRDMKPENVLIGDDGRVKVADFGLV-RAVDSVTNTTGT-VLGTVSYLAPEQIEHGTADPRVDVYACGILLYEMLTGEKPHDGDSP 221          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: Y3288_ARATH (Probable inactive receptor kinase At3g02880 OS=Arabidopsis thaliana GN=At3g02880 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.005e-11
Identity = 42/104 (40.38%), Postives = 60/104 (57.69%), Query Frame = 3
Query:   12 HRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDH-------TLPRGQQSLVTWATP 302
            H +IKSSN+L+ D   AK++D+ L   AP +++     R+    GY APE     +++ K+DVYSFGV++LELLTG+ P           LPR  QS+    TP
Sbjct:  468 HGNIKSSNILLSDSYEAKVSDYGL---APIISSTSAPNRI---DGYRAPEITDARKISQKADVYSFGVLILELLTGKSPTHQQLNEEGVDLPRWVQSVTEQQTP 565          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: SHKC_DICDI (Dual specificity protein kinase shkC OS=Dictyostelium discoideum GN=shkC PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.005e-11
Identity = 37/83 (44.58%), Postives = 48/83 (57.83%), Query Frame = 3
Query:    9 IHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDH 257
            +HRDIKSSN+L+ ++   KI DF LS            +   GT  Y APE  M  + N  SDVYSFG+VL E+LT ++P  H
Sbjct:  144 VHRDIKSSNLLVDENMRVKICDFGLSALKQKHKMLKDQSSAKGTPLYMAPEVMMFKEFNESSDVYSFGIVLWEILTRKEPFSH 226          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: PRKC_BACSU (Serine/threonine-protein kinase prkC OS=Bacillus subtilis GN=prkC PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.005e-11
Identity = 37/83 (44.58%), Postives = 48/83 (57.83%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 254
            I+HRDIK  N+LI      K+ DF ++  A       H+  VLG+  Y +PE A  G    KSD+Y+ G+VL ELLTGR P D
Sbjct:  130 IVHRDIKPHNILIDHMGNIKVTDFGIAT-ALSSTTITHTNSVLGSVHYLSPEQARGGLATKKSDIYALGIVLFELLTGRIPFD 211          
The following BLAST results are available for this feature:
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 246
Match NameE-valueIdentityDescription
PUB51_ARATH9.001e-1243.37U-box domain-containing protein 51 OS=Arabidopsis ... [more]
Y4885_ARATH1.176e-1145.24Probable LRR receptor-like serine/threonine-protei... [more]
Y1124_ARATH1.176e-1136.52Probable LRR receptor-like serine/threonine-protei... [more]
Y1719_ARATH1.535e-1139.45Probable inactive receptor kinase At1g27190 OS=Ara... [more]
PUB35_ARATH1.535e-1140.23U-box domain-containing protein 35 OS=Arabidopsis ... [more]
PUB33_ARATH1.535e-1141.77U-box domain-containing protein 33 OS=Arabidopsis ... [more]
PK1_STRTO1.535e-1146.51Serine/threonine-protein kinase PK-1 OS=Streptomyc... [more]
Y3288_ARATH2.005e-1140.38Probable inactive receptor kinase At3g02880 OS=Ara... [more]
SHKC_DICDI2.005e-1144.58Dual specificity protein kinase shkC OS=Dictyostel... [more]
PRKC_BACSU2.005e-1144.58Serine/threonine-protein kinase prkC OS=Bacillus s... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00685 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00685 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623594 ID=BQ623594; Name=BQ623594; organism=Citrus sinensis; type=EST; length=427bp
CTCATATTATCCATCGCGATATTAAGTCCAGCAATGTACTAATTTTTGAT
GATGATGTAGCAAAGATTGCCGACTTTGATTTATCTAATCAAGCTCCTGA
TATGGCAGCTCGCCTTCATTCTACTCGTGTTCTTGGAACTTTTGGTTATC
ATGCTCCTGAGTATGCAATGACTGGACAGTTGAATGCAAAGAGTGATGTA
TACAGCTTTGGTGTTGTTCTGCTTGAGCTTCTGACAGGTCGAAAACCTGT
CGATCATACACTACCACGTGGACAGCAGAGTCTAGTGACATGGGCCACAC
CGAAACTTAGTGAAGATAAGGTTAGGCAATGCGTTGATGCAAGACTAGGA
GGAGATTATCCTCCCAAGGCAGTTGCAAAGATGGCTGCAGTTGCTGCTCT
GTGTGTTCAGTATGAAGCTGATTTCCG
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