BQ623594

Overview
NameBQ623594
Unique NameBQ623594
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length427
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2221 contig Csv1_Contig2221:826..1252. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: WAKLN_ARATH (Wall-associated receptor kinase-like 18 OS=Arabidopsis thaliana GN=WAKL18 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.867e-16
Identity = 52/124 (41.94%), Postives = 70/124 (56.45%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVL-GTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWA---TPKLSEDKVRQCVDARLGGDYPP 365
            I HRDIKS+N+L+ +   AK+ADF  S        + H T V+ GT GY  PEY  + Q   KSDVYSFGV+L EL+TG KPV   + +  Q +V  A      + E ++   +DAR+  D  P
Sbjct:  575 IYHRDIKSTNILLDEKYRAKVADFGTSRSVT--IDQTHWTTVISGTVGYVDPEYYQSSQYTEKSDVYSFGVILAELITGDKPV--IMVQNTQEIVALAEHFRVAMKEKRLTDIIDARIRNDCKP 694          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: CRK31_ARATH (Putative cysteine-rich receptor-like protein kinase 31 OS=Arabidopsis thaliana GN=CRK31 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.867e-16
Identity = 51/136 (37.50%), Postives = 69/136 (50.74%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD-HTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXXLCVQ 410
            IIHRDIK+SN+L+  D   KIADF ++           + RV+GTFGY  PEY   GQ + KSDVYSFGV++LE++ G+K      +     +LVT      + D     +D  +   Y             LCVQ
Sbjct:  460 IIHRDIKASNILLDADMNPKIADFGMARNFRVDQTEDQTGRVVGTFGYMPPEYVTHGQFSTKSDVYSFGVLILEIVCGKKNSSFFQMDDSGGNLVTHVWRLWNNDSPLDLIDPAIKESYDNDEVIRCIHIGILCVQ 595          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: CCR12_ARATH (Serine/threonine-protein kinase-like protein At1g28390 OS=Arabidopsis thaliana GN=At1g28390 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.867e-16
Identity = 47/114 (41.23%), Postives = 63/114 (55.26%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARL 347
            +IHRDIKS NVLI  D  A++ADF L+        RL  T   GT GY  P Y     L AKSDV+SFG++LLE+++GR+ +D  L      +V WA P +         D ++
Sbjct:  182 VIHRDIKSCNVLIDGDGNARLADFGLALIGNVDDERLKYTPPAGTLGYLDPSYLAPADLTAKSDVFSFGILLLEIISGREAID--LNYSPSCIVDWAVPLIKRGDYDAICDLKI 293          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: ACCR3_ARATH (Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana GN=CCR3 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.867e-16
Identity = 50/126 (39.68%), Postives = 70/126 (55.56%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAP----DMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQS-------LVTWATPKLSEDKVRQCVDARLG 350
            IIHRDIKSSN+L+  + VA+++DF LS   P    D       T+  GT GY  PEY     L  KSDVY  GVVLLELLTG++ +       ++        LV ++ P ++ D++   +D R+G
Sbjct:  627 IIHRDIKSSNILLDSNWVARVSDFGLSLMGPVLGKDHNPYQRPTKAAGTVGYIDPEYYSLNVLTDKSDVYGLGVVLLELLTGKRAIFRNNGDVEEEEGCVPVHLVDYSVPAITADELSTILDPRVG 752          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: CRK32_ARATH (Putative cysteine-rich receptor-like protein kinase 32 OS=Arabidopsis thaliana GN=CRK32 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.027e-15
Identity = 41/80 (51.25%), Postives = 55/80 (68.75%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRK 245
            IIHRDIK+SN+L+  D   KIADF ++          ++ RV+GTFGY  PEY   GQ + KSDVYSFGV++LE++ G+K
Sbjct:  450 IIHRDIKASNILLDADMNPKIADFGMARNFRVDQTEDNTRRVVGTFGYMPPEYVTHGQFSTKSDVYSFGVLILEIVCGKK 529          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: LRKA1_ARATH (Lectin-domain containing receptor kinase A4.1 OS=Arabidopsis thaliana GN=LECRKA4.1 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.752e-15
Identity = 45/118 (38.14%), Postives = 67/118 (56.78%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDY 359
            +IHRD+K SNVLI      ++ DF L+ +  +      +T ++GT GY APE +  G  ++ SDV++FGV+LLE++ GRKP D     G   LV W     +  ++   +D RLG  Y
Sbjct:  490 VIHRDVKPSNVLIDSKMNPRLGDFGLA-RLYERGTLSETTALVGTIGYMAPELSRNGNPSSASDVFAFGVLLLEIVCGRKPTD----SGTFFLVDWVMELHANGEILSAIDPRLGSGY 602          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.289e-15
Identity = 49/137 (35.77%), Postives = 77/137 (56.20%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHT-LPRGQQSLVTWATPKLSEDK-VRQCVDARLGGDYPPXXXXXXXXXXXLCVQ 410
            IIHRD+K++NVL+ +D  A + DF L+    D+     +T+V GT G+ APEY  TG+ + ++DV+ +G++LLEL+TG++ +D + L      L+     KL  +K +   VD  L G+Y             LC Q
Sbjct:  413 IIHRDVKAANVLLDEDFEAVVGDFGLAKLV-DVRRTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLGAIVDKNLDGEYIKEEVEMMIQVALLCTQ 548          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: Y1743_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g74360 OS=Arabidopsis thaliana GN=At1g74360 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.989e-15
Identity = 46/119 (38.66%), Postives = 67/119 (56.30%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYP 362
            I+HRD+K+SNVL+     A++ DF L+    ++     ST + GT GY APEY  T Q   + DVYS+GV+ +EL TGR+ VD     G++ LV WA   ++ +   +     L G  P
Sbjct:  937 IVHRDVKASNVLLDKHGNARVTDFGLARLL-NVGDSHVSTVIAGTIGYVAPEYGQTWQATTRGDVYSYGVLTMELATGRRAVD----GGEECLVEWARRVMTGNMTAKGSPITLSGTKP 1050          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: WAKLF_ARATH (Wall-associated receptor kinase-like 6 OS=Arabidopsis thaliana GN=WAKL6 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.989e-15
Identity = 42/82 (51.22%), Postives = 55/82 (67.07%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPV 251
            I HRDIK++N+L+ +   AK++DF  S         L +T V GTFGY  PEY ++ Q   KSDVYSFGVVL+EL+TG KP+
Sbjct:  555 IYHRDIKTTNILLDEKYRAKVSDFGTSRSITIAQTHL-TTLVAGTFGYMDPEYFLSSQYTDKSDVYSFGVVLVELITGEKPL 635          
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.989e-15
Identity = 39/80 (48.75%), Postives = 55/80 (68.75%), Query Frame = 3
Query:    6 IIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRK 245
            IIHRD+K+SN+L+  +   K+ADF  +        R  + R+ GT GY APEY   GQ++AKSDVYSFGV+LLE+++G +
Sbjct:  469 IIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAETKRIAGTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMISGER 548          
The following BLAST results are available for this feature:
BLAST of BQ623594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 246
Match NameE-valueIdentityDescription
WAKLN_ARATH7.867e-1641.94Wall-associated receptor kinase-like 18 OS=Arabido... [more]
CRK31_ARATH7.867e-1637.50Putative cysteine-rich receptor-like protein kinas... [more]
CCR12_ARATH7.867e-1641.23Serine/threonine-protein kinase-like protein At1g2... [more]
ACCR3_ARATH7.867e-1639.68Putative serine/threonine-protein kinase-like prot... [more]
CRK32_ARATH1.027e-1551.25Putative cysteine-rich receptor-like protein kinas... [more]
LRKA1_ARATH1.752e-1538.14Lectin-domain containing receptor kinase A4.1 OS=A... [more]
Y5129_ARATH2.289e-1535.77Probable LRR receptor-like serine/threonine-protei... [more]
Y1743_ARATH2.989e-1538.66Probable LRR receptor-like serine/threonine-protei... [more]
WAKLF_ARATH2.989e-1551.22Wall-associated receptor kinase-like 6 OS=Arabidop... [more]
CRK40_ARATH2.989e-1548.75Cysteine-rich receptor-like protein kinase 40 OS=A... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00685 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00685 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623594 ID=BQ623594; Name=BQ623594; organism=Citrus sinensis; type=EST; length=427bp
CTCATATTATCCATCGCGATATTAAGTCCAGCAATGTACTAATTTTTGAT
GATGATGTAGCAAAGATTGCCGACTTTGATTTATCTAATCAAGCTCCTGA
TATGGCAGCTCGCCTTCATTCTACTCGTGTTCTTGGAACTTTTGGTTATC
ATGCTCCTGAGTATGCAATGACTGGACAGTTGAATGCAAAGAGTGATGTA
TACAGCTTTGGTGTTGTTCTGCTTGAGCTTCTGACAGGTCGAAAACCTGT
CGATCATACACTACCACGTGGACAGCAGAGTCTAGTGACATGGGCCACAC
CGAAACTTAGTGAAGATAAGGTTAGGCAATGCGTTGATGCAAGACTAGGA
GGAGATTATCCTCCCAAGGCAGTTGCAAAGATGGCTGCAGTTGCTGCTCT
GTGTGTTCAGTATGAAGCTGATTTCCG
back to top