BQ623597

Overview
NameBQ623597
Unique NameBQ623597
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length426
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6849 contig Csv1_Contig6849:289..714. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623597 vs. ExPASy Swiss-Prot
Match: HSP11_SOLPE (17.7 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 5.981e-40
Identity = 83/131 (63.36%), Postives = 101/131 (77.10%), Query Frame = 3
Query:   36 MSLIPSIFGGRRTN-VFDPFSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKA 425
            MSLIP IFG RR++ +FDPFS+DV+DPF       L    +++ ETS FAN RIDWKETP+AHVFKADLPGL+           R+LQISGER+ E+E+KNDKW RVERSSGKF+RRFRLP+NAK++QVKA
Sbjct:    1 MSLIPRIFGDRRSSSMFDPFSIDVFDPF-----RELGFPGTNSGETSAFANTRIDWKETPEAHVFKADLPGLKLEEVKVEVEEDRVLQISGERNMEKEDKNDKWQRVERSSGKFMRRFRLPENAKMDQVKA 126          
BLAST of BQ623597 vs. ExPASy Swiss-Prot
Match: HS177_ORYSJ (17.7 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 1.333e-39
Identity = 80/127 (62.99%), Postives = 93/127 (73.23%), Query Frame = 3
Query:   66 RRTNVFDPFSLDVWDPFDGF-------LSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKA 425
            RR N FDPFSLD+WDP DGF        SS+ +  P +  + + FA ARIDWKETP+ HVFKAD+PGL+          G ILQISGERS+EQEEK+DKWHRVERSSGKFLRRFRLP+N K EQ+KA
Sbjct:    5 RRGNAFDPFSLDLWDPVDGFPFGSGGSSSSSGSLFPRANSDAAAFAGARIDWKETPEVHVFKADVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPEQIKA 131          
BLAST of BQ623597 vs. ExPASy Swiss-Prot
Match: HS16C_ORYSJ (16.9 kDa class I heat shock protein 3 OS=Oryza sativa subsp. japonica GN=HSP16.9C PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 1.333e-39
Identity = 77/120 (64.17%), Postives = 96/120 (80.00%), Query Frame = 3
Query:   66 RRTNVFDPFSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKA 425
            RR+NVFDPF+ D WDPFDG   S +    +S R+T+ FANAR+DWKETP++HVFKADLPG++          G +L ISG+RSKE+E+KNDKWHRVERSSG+F+RRFRLP+NAKV+QVKA
Sbjct:    5 RRSNVFDPFA-DFWDPFDGVFRSLVP--ATSDRDTAAFANARVDWKETPESHVFKADLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVDQVKA 121          
BLAST of BQ623597 vs. ExPASy Swiss-Prot
Match: HS17B_ARATH (17.6 kDa class I heat shock protein 2 OS=Arabidopsis thaliana GN=HSP17.6B PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 2.273e-39
Identity = 79/131 (60.31%), Postives = 96/131 (73.28%), Query Frame = 3
Query:   36 MSLIPSIFGG-RRTNVFDPFSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKA 425
            MS+IPS F   RR+N+FDPFSLDVWDPF    SS+L+      RE S   NAR+DW+ETP+AHVFKADLPGL+            +L+ISGER  E+E+KND WHRVERSSG+F RRFRLP+N K++QVKA
Sbjct:    1 MSMIPSFFNNNRRSNIFDPFSLDVWDPFKELTSSSLS------RENSAIVNARVDWRETPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENVKMDQVKA 125          
BLAST of BQ623597 vs. ExPASy Swiss-Prot
Match: HSP11_SOLLC (17.8 kDa class I heat shock protein OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 3.877e-39
Identity = 82/133 (61.65%), Postives = 102/133 (76.69%), Query Frame = 3
Query:   36 MSLIPSIFGGRRTN-VFDPFSLDVWDPFD--GFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKA 425
            MSLIP IFG RR++ +FDPFS+DV+DPF   GF S+       ++ E+S FAN RIDWKETP+ HVFK DLPGL+           R+LQISGER+ E+E+KNDKWHR+ERSSGKF+RRFRLP+NAK++QVKA
Sbjct:    1 MSLIPRIFGDRRSSSMFDPFSIDVFDPFRELGFPST-------NSGESSAFANTRIDWKETPEPHVFKVDLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDKWHRMERSSGKFMRRFRLPENAKMDQVKA 126          
BLAST of BQ623597 vs. ExPASy Swiss-Prot
Match: HSP11_MEDSA (18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 3.629e-37
Identity = 73/115 (63.48%), Postives = 90/115 (78.26%), Query Frame = 3
Query:   84 DPFSLDVWDPFDGF-LSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKA 425
            DPFSLDVWDPF  F  +++  +A S  +E S F + RIDWKETP+AHVFKADLPGL+           R+LQISGER+ E+E+KND+WHRVERSSGKF+RRFRLP+NAK++QVKA
Sbjct:    1 DPFSLDVWDPFKDFPFTNSALSASSFPQENSAFVSTRIDWKETPEAHVFKADLPGLKKEEVKVEIEDDRVLQISGERNVEKEDKNDQWHRVERSSGKFMRRFRLPENAKMDQVKA 115          
BLAST of BQ623597 vs. ExPASy Swiss-Prot
Match: HS16A_WHEAT (16.9 kDa class I heat shock protein 1 OS=Triticum aestivum GN=hsp16.9A PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 4.739e-37
Identity = 76/121 (62.81%), Postives = 95/121 (78.51%), Query Frame = 3
Query:   66 RRTNVFDPFSLDVW-DPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKA 425
            RR+NVFDPF+ D+W DPFD F S     +  S+ ET+ FANAR+DWKETP+AHVFK DLPG++          G +L +SGERS+E+E+KNDKWHRVERSSGKF+RRFRLP++AKVE+VKA
Sbjct:    5 RRSNVFDPFA-DLWADPFDTFRSIVPAISGGSS-ETAAFANARVDWKETPEAHVFKVDLPGVKKEEVKVEVEDGNVLVVSGERSREKEDKNDKWHRVERSSGKFVRRFRLPEDAKVEEVKA 123          
BLAST of BQ623597 vs. ExPASy Swiss-Prot
Match: HS16B_WHEAT (16.9 kDa class I heat shock protein 2 OS=Triticum aestivum GN=hsp16.9B PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 1.801e-36
Identity = 76/121 (62.81%), Postives = 93/121 (76.86%), Query Frame = 3
Query:   66 RRTNVFDPFSLDVW-DPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKA 425
            RRTNVFDPF+ D+W DPFD F  S +        ET+ FANAR+DWKETP+AHVFKADLPG++          G +L +SGER+KE+E+KNDKWHRVERSSGKF+RRFRL ++AKVE+VKA
Sbjct:    5 RRTNVFDPFA-DLWADPFDTF-RSIVPAISGGGSETAAFANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKA 123          
BLAST of BQ623597 vs. ExPASy Swiss-Prot
Match: HS178_ARATH (17.8 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.8 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.167e-35
Identity = 75/132 (56.82%), Postives = 91/132 (68.94%), Query Frame = 3
Query:   36 MSLIPSIFGGRR--TNVFDPFSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKA 425
            MSLIPS FG  R   ++FDPFSLDVWDPF       L    S + ETS   NAR+DWKET +AHVFKADLPG++            +L+ISGER  E+EEK D WHRVERSSG+F R+F+LP+N K++QVKA
Sbjct:    1 MSLIPSFFGNNRRSNSIFDPFSLDVWDPF-----KELQFPSSLSGETSAITNARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPENVKMDQVKA 127          
BLAST of BQ623597 vs. ExPASy Swiss-Prot
Match: HS17A_ARATH (17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana GN=HSP17.6A PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.991e-35
Identity = 77/133 (57.89%), Postives = 91/133 (68.42%), Query Frame = 3
Query:   36 MSLIPSIFGGRR---TNVFDPFSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKA 425
            MSLIPS FG  R    N+FDPFSLDVWDPF           PSS+  +S  ANAR+DWKET +AHVFKADLPG++            +L+ISGER  E+EEK D WHRVERSSG F R+FRLP+N K++QVKA
Sbjct:    1 MSLIPSFFGNNRRINNNIFDPFSLDVWDPFKEL------QFPSSS--SSAIANARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGGFSRKFRLPENVKMDQVKA 125          
The following BLAST results are available for this feature:
BLAST of BQ623597 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
HSP11_SOLPE5.981e-4063.3617.7 kDa class I heat shock protein OS=Solanum per... [more]
HS177_ORYSJ1.333e-3962.9917.7 kDa class I heat shock protein OS=Oryza sativ... [more]
HS16C_ORYSJ1.333e-3964.1716.9 kDa class I heat shock protein 3 OS=Oryza sat... [more]
HS17B_ARATH2.273e-3960.3117.6 kDa class I heat shock protein 2 OS=Arabidops... [more]
HSP11_SOLLC3.877e-3961.6517.8 kDa class I heat shock protein OS=Solanum lyc... [more]
HSP11_MEDSA3.629e-3763.4818.1 kDa class I heat shock protein (Fragment) OS=... [more]
HS16A_WHEAT4.739e-3762.8116.9 kDa class I heat shock protein 1 OS=Triticum ... [more]
HS16B_WHEAT1.801e-3662.8116.9 kDa class I heat shock protein 2 OS=Triticum ... [more]
HS178_ARATH1.167e-3556.8217.8 kDa class I heat shock protein OS=Arabidopsis... [more]
HS17A_ARATH1.991e-3557.8917.6 kDa class I heat shock protein 1 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00688 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00688 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623597 ID=BQ623597; Name=BQ623597; organism=Citrus sinensis; type=EST; length=426bp
TGTTGAGCATTTAATTAGCGCCCCAGTTTGCCATAATGTCACTCATTCCA
AGCATCTTCGGTGGCCGAAGAACCAACGTGTTCGATCCATTTTCATTAGA
TGTATGGGATCCTTTCGACGGGTTCTTGTCCTCTGCCCTTACCAACGCGC
CGTCTTCGGCTAGGGAAACATCCCAATTCGCCAATGCAAGAATTGACTGG
AAAGAGACTCCTCAGGCTCATGTATTCAAGGCTGATCTTCCAGGGCTGAG
GAAAGAAGAAGTGAAAGTTGAGGTTGAAGAGGGCAGGATTCTGCAGATAA
GCGGGGAGAGGAGCAAGGAGCAGGAAGAGAAGAATGACAAGTGGCATCGC
GTCGAGAGGAGCAGTGGCAAGTTCCTGAGGAGGTTCAGGTTGCCCGACAA
TGCTAAGGTGGAGCAGGTTAAGGCCA
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