BQ623598
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: RH8_ARATH (DEAD-box ATP-dependent RNA helicase 8 OS=Arabidopsis thaliana GN=RH8 PE=2 SV=1) HSP 1 Score: 306.22 bits (783), Expect = 1.724e-94 Identity = 147/156 (94.23%), Postives = 153/156 (98.08%), Query Frame = 2 Query: 71 LKKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIYCR 538 +++ +K CLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKN+ETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIYC+ Sbjct: 350 VEERQKIHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIYCQ 505 HSP 2 Score: 60.8474 bits (146), Expect = 1.724e-94 Identity = 27/29 (93.10%), Postives = 29/29 (100.00%), Query Frame = 1 Query: 7 PYVINLMDELTLKGITQYYAFVEERQKVH 93 PYVINLMDELTLKGITQ+YAFVEERQK+H Sbjct: 329 PYVINLMDELTLKGITQFYAFVEERQKIH 357
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: RH8_ORYSJ (DEAD-box ATP-dependent RNA helicase 8 OS=Oryza sativa subsp. japonica GN=Os02g0641800 PE=2 SV=2) HSP 1 Score: 298.516 bits (763), Expect = 7.131e-93 Identity = 144/156 (92.31%), Postives = 150/156 (96.15%), Query Frame = 2 Query: 71 LKKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIYCR 538 +++ +K CLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPK +ETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIK IPP IDQAIYC+ Sbjct: 353 VEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKPIPPQIDQAIYCQ 508 HSP 2 Score: 63.1586 bits (152), Expect = 7.131e-93 Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 1 Query: 4 KPYVINLMDELTLKGITQYYAFVEERQKVH 93 KPYVINLMDELTLKGITQ+YAFVEERQKVH Sbjct: 331 KPYVINLMDELTLKGITQFYAFVEERQKVH 360
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: RH6_ORYSJ (DEAD-box ATP-dependent RNA helicase 6 OS=Oryza sativa subsp. japonica GN=Os04g0533000 PE=2 SV=1) HSP 1 Score: 297.36 bits (760), Expect = 1.583e-92 Identity = 143/156 (91.67%), Postives = 151/156 (96.79%), Query Frame = 2 Query: 71 LKKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIYCR 538 +++ +K CLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPK++ETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIK IPP ID+AIYC+ Sbjct: 343 VEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKSAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKPIPPQIDRAIYCQ 498 HSP 2 Score: 63.1586 bits (152), Expect = 1.583e-92 Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 1 Query: 4 KPYVINLMDELTLKGITQYYAFVEERQKVH 93 KPYVINLMDELTLKGITQ+YAFVEERQKVH Sbjct: 321 KPYVINLMDELTLKGITQFYAFVEERQKVH 350
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: RH12_ORYSJ (DEAD-box ATP-dependent RNA helicase 12 OS=Oryza sativa subsp. japonica GN=Os10g0503700 PE=2 SV=2) HSP 1 Score: 296.59 bits (758), Expect = 2.065e-92 Identity = 143/156 (91.67%), Postives = 149/156 (95.51%), Query Frame = 2 Query: 71 LKKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIYCR 538 +++ +K CLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPK SETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIK IPP ID A+YC+ Sbjct: 366 VEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKTSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKTIPPQIDLAVYCQ 521 HSP 2 Score: 63.5438 bits (153), Expect = 2.065e-92 Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 1 Query: 4 KPYVINLMDELTLKGITQYYAFVEERQKVH 93 +PYVINLMDELTLKGITQYYAFVEERQKVH Sbjct: 344 RPYVINLMDELTLKGITQYYAFVEERQKVH 373
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: RH12_ARATH (DEAD-box ATP-dependent RNA helicase 12 OS=Arabidopsis thaliana GN=RH12 PE=2 SV=1) HSP 1 Score: 284.648 bits (727), Expect = 3.859e-88 Identity = 135/156 (86.54%), Postives = 148/156 (94.87%), Query Frame = 2 Query: 71 LKKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIYCR 538 +++ +K CLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKM+QDHRNRVFH+FRNGACRNLVCTDLFTRGIDIQAVNVVINFDFP+ SE+YLHRVGRSGRFGHLGLAVNL+TYEDRF +Y+ EQELGTEIK IP +IDQAIYC+ Sbjct: 343 VEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMYQTEQELGTEIKPIPSNIDQAIYCQ 498 HSP 2 Score: 61.2326 bits (147), Expect = 3.859e-88 Identity = 27/31 (87.10%), Postives = 30/31 (96.77%), Query Frame = 1 Query: 1 QKPYVINLMDELTLKGITQYYAFVEERQKVH 93 +KPYVINLMD+LTL G+TQYYAFVEERQKVH Sbjct: 320 RKPYVINLMDQLTLMGVTQYYAFVEERQKVH 350
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: RH6_ARATH (DEAD-box ATP-dependent RNA helicase 6 OS=Arabidopsis thaliana GN=RH6 PE=2 SV=2) HSP 1 Score: 283.108 bits (723), Expect = 1.457e-87 Identity = 135/156 (86.54%), Postives = 147/156 (94.23%), Query Frame = 2 Query: 71 LKKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIYCR 538 +++ +K CLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKM+QDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFP+ SE+YLHRVGRSGRFGHLGLAVNL+TYEDRF +Y+ EQELGTEIK IP ID+AIYC+ Sbjct: 373 VEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMYQTEQELGTEIKPIPSLIDKAIYCQ 528 HSP 2 Score: 60.8474 bits (146), Expect = 1.457e-87 Identity = 26/31 (83.87%), Postives = 30/31 (96.77%), Query Frame = 1 Query: 1 QKPYVINLMDELTLKGITQYYAFVEERQKVH 93 +KPY+INLMD+LTL G+TQYYAFVEERQKVH Sbjct: 350 KKPYIINLMDQLTLMGVTQYYAFVEERQKVH 380
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DDX6_DICDI (Probable ATP-dependent RNA helicase ddx6 OS=Dictyostelium discoideum GN=ddx6 PE=3 SV=1) HSP 1 Score: 274.248 bits (700), Expect = 2.086e-83 Identity = 131/154 (85.06%), Postives = 146/154 (94.81%), Query Frame = 2 Query: 71 LKKGRKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIY 532 +++ +K CLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCF+IHAKM+Q HRNRVFHDFRNGACRNLV +DLFTRGIDIQ VNVVINFDFPK+SETYLHR+GRSGRFGHLGLA+NLITYEDRF+LY+IEQELGTEIK IPP ID+++Y Sbjct: 268 VEERQKIHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFFIHAKMVQAHRNRVFHDFRNGACRNLVSSDLFTRGIDIQDVNVVINFDFPKHSETYLHRIGRSGRFGHLGLAINLITYEDRFSLYKIEQELGTEIKPIPPVIDKSLY 421 HSP 2 Score: 55.8398 bits (133), Expect = 2.086e-83 Identity = 24/31 (77.42%), Postives = 29/31 (93.55%), Query Frame = 1 Query: 1 QKPYVINLMDELTLKGITQYYAFVEERQKVH 93 Q+ + INLM+ELTLKG+TQYYAFVEERQK+H Sbjct: 245 QQAFEINLMEELTLKGVTQYYAFVEERQKIH 275
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DDX6_MOUSE (Probable ATP-dependent RNA helicase DDX6 OS=Mus musculus GN=Ddx6 PE=2 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 7.206e-81 Identity = 124/150 (82.67%), Postives = 139/150 (92.67%), Query Frame = 2 Query: 83 RKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIY 532 +K CLNTLFS+LQINQSIIFCNS RVELLAKKI++LGYSCFYIHAKM Q+HRNRVFHDFRNG CRNLVCTDLFTRGIDIQAVNVVINFDFPK +ETYLHR+GRSGRFGHLGLA+NLITY+DRFNL IE++LGTEIK IP +ID+++Y Sbjct: 320 QKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLY 469 HSP 2 Score: 58.9214 bits (141), Expect = 7.206e-81 Identity = 26/31 (83.87%), Postives = 29/31 (93.55%), Query Frame = 1 Query: 1 QKPYVINLMDELTLKGITQYYAFVEERQKVH 93 QKPY INLM+ELTLKG+TQYYA+V ERQKVH Sbjct: 293 QKPYEINLMEELTLKGVTQYYAYVTERQKVH 323
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DDX6_HUMAN (Probable ATP-dependent RNA helicase DDX6 OS=Homo sapiens GN=DDX6 PE=1 SV=2) HSP 1 Score: 262.692 bits (670), Expect = 7.206e-81 Identity = 124/150 (82.67%), Postives = 139/150 (92.67%), Query Frame = 2 Query: 83 RKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIY 532 +K CLNTLFS+LQINQSIIFCNS RVELLAKKI++LGYSCFYIHAKM Q+HRNRVFHDFRNG CRNLVCTDLFTRGIDIQAVNVVINFDFPK +ETYLHR+GRSGRFGHLGLA+NLITY+DRFNL IE++LGTEIK IP +ID+++Y Sbjct: 320 QKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLY 469 HSP 2 Score: 58.9214 bits (141), Expect = 7.206e-81 Identity = 26/31 (83.87%), Postives = 29/31 (93.55%), Query Frame = 1 Query: 1 QKPYVINLMDELTLKGITQYYAFVEERQKVH 93 QKPY INLM+ELTLKG+TQYYA+V ERQKVH Sbjct: 293 QKPYEINLMEELTLKGVTQYYAYVTERQKVH 323
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Match: DDX6_CHICK (Probable ATP-dependent RNA helicase DDX6 OS=Gallus gallus GN=DDX6 PE=2 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 7.206e-81 Identity = 124/150 (82.67%), Postives = 139/150 (92.67%), Query Frame = 2 Query: 83 RKSTCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIY 532 +K CLNTLFS+LQINQSIIFCNS RVELLAKKI++LGYSCFYIHAKM Q+HRNRVFHDFRNG CRNLVCTDLFTRGIDIQAVNVVINFDFPK +ETYLHR+GRSGRFGHLGLA+NLITY+DRFNL IE++LGTEIK IP +ID+++Y Sbjct: 320 QKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLY 469 HSP 2 Score: 58.9214 bits (141), Expect = 7.206e-81 Identity = 26/31 (83.87%), Postives = 29/31 (93.55%), Query Frame = 1 Query: 1 QKPYVINLMDELTLKGITQYYAFVEERQKVH 93 QKPY INLM+ELTLKG+TQYYA+V ERQKVH Sbjct: 293 QKPYEINLMEELTLKGVTQYYAYVTERQKVH 323 The following BLAST results are available for this feature:
BLAST of BQ623598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623598 ID=BQ623598; Name=BQ623598; organism=Citrus sinensis; type=EST; length=636bpback to top |